Difference between revisions of "Os09g0521900"

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Please input one-sentence summary here.
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The rice '''Os09g0521900''' was reported as ''' OsGEN-L''' in 2005 <ref name="ref1" /> by researchers from the Japan.  
 
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<br>
 
==Annotated Information==
 
==Annotated Information==
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===Gene Symbol===
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*'''Os09g0521900 <=> OsGEN-L'''
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<br>
 
===Function===
 
===Function===
Please input function information here.
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*'''OsGEN-L''' plays an essential role in DNA metabolism required for early microspore development in rice.
 
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<br>
===Expression===
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===Mutant===
Please input expression information here.
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*To elucidate the function of '''OsGEN-L''', the researchers generated rice OsGEN-L-RNAi transgenic plants in which OsGEN-L expression was silenced. Most of the OsGEN-L-RNAi plants displayed low fertility, and some of them were male-sterile. OsGEN-L-RNAi plants lacked mature pollen, resulting from a defect in early microspore development.  
 
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<br>
===Evolution===
 
Please input evolution information here.
 
 
 
You can also add sub-section(s) at will.
 
  
 
==Labs working on this gene==
 
==Labs working on this gene==
Please input related labs here.
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*Laboratory of Plant Molecular Genetics, Nara Institute of Science and Technology, Takayama 8916-5, Ikoma, Nara, 630-0192 Japan
 
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*Laboratory of Microbial Molecular Genetics, Nara Institute of Science and Technology, Takayama 8916-5, Ikoma, Nara, 630-0192 Japan
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<br>
 
==References==
 
==References==
Please input cited references here.
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<references>
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<ref name="ref1">
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RNAi-mediated Silencing of OsGEN-L (OsGEN-like), a New Member of the RAD2/XPG Nuclease Family, Causes Male Sterility by Defect of Microspore Development in Rice
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</ref>
  
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</references>
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<br>
 
==Structured Information==
 
==Structured Information==
{{JaponicaGene|
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[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 9]]
GeneName = Os09g0521900|
 
Description = Conserved hypothetical protein|
 
Version = NM_001070244.1 GI:115480230 GeneID:4347617|
 
Length = 3988 bp|
 
Definition = Oryza sativa Japonica Group Os09g0521900, complete gene.|
 
Source = Oryza sativa Japonica Group
 
 
 
  ORGANISM  Oryza sativa Japonica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Japonica Chromosome 9|Chromosome 9]]|
 
AP = Chromosome 9:21132561..21136548|
 
CDS = 21132561..21132883,21133207..21133267|
 
GCID = <gbrowseImage1>
 
name=NC_008402:21132561..21136548
 
source=RiceChromosome09
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=NC_008402:21132561..21136548
 
source=RiceChromosome09
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>acctgcagcgacccaacccgacccaacccaactcgcgcgagccctgcggtttcgccggcgaaacgaggccgacctaaaccctccgccgccgccgccgccgtcgccggggaagaagagagatgggggtggggggaagcttctgggacctgctcaagccgtacgcgcggcacgagggcgcggggtacctccgcggccgccgcgtcgccgtcgacctctccttctgggtcgtctcccacagcgccgccatccgggcgcgctcgccgcacgcgcgcctcccccatctccgcaccctcttcttccgcaccctctccctcttctccaagatgggtgcttttcctgtgttcgtggtggacggccagccgtcgccgctcaagtcgcaggtga</cdnaseq>|
 
AA = <aaseq>TCSDPTRPNPTRASPAVSPAKRGRPKPSAAAAAVAGEEERWGWG                    EASGTCSSRTRGTRARGTSAAAASPSTSPSGSSPTAPPSGRARRTRASPISAPSSSAP                    SPSSPRWVLFLCSWWTASRRRSSRR</aaseq>|
 
DNA = <dnaseqindica>1..323#647..707#acctgcagcgacccaacccgacccaacccaactcgcgcgagccctgcggtttcgccggcgaaacgaggccgacctaaaccctccgccgccgccgccgccgtcgccggggaagaagagagatgggggtggggggaagcttctgggacctgctcaagccgtacgcgcggcacgagggcgcggggtacctccgcggccgccgcgtcgccgtcgacctctccttctgggtcgtctcccacagcgccgccatccgggcgcgctcgccgcacgcgcgcctcccccatctccgcaccctcttcttccgcaccctctccctcttctccaaggtgagccaccccctcccctctccccagggtttccttccttcccctccgccccgcgacatgtatgtagcttcacttccgtttcttgatctcccccaaggtttcttgttcttagtacatttctagcgttttatgtgattatgaacaatctgcattgcggaaatgtacgttctgtgctgttttcaagactgaatcttggatgtgcaaccgccgttggggtctatgcttgggggcatgggggctaatgctgttcaatgtgttttgattcctcgatttgggcccggaattttgattcacgtgatggattatctctggaactgttgcagatgggtgcttttcctgtgttcgtggtggacggccagccgtcgccgctcaagtcgcaggtgagggccgcgcgattcttcagaggatctggaatggacctcgctgcgctgccgagcacggaggcggaggccagtgcggatgcgctggttcaaccgaggaatgccaagttcacgcgatacgtggaggattgcgtggtgagtgtccgtgccatggctgtgcttgtgatccttccttgtcagtttaggatgtgtaatttggtcgtacaagacagttcgaagtacgatgtaataaattgccgcttaaataccataggcatgattcaacacggtgtttataagcctctgaagtaatatgttcgaaattactcttatctaaataaaaaggcgggaatttgtcaaggcgcgaagcgggtcggtagaaaagaaaactttccatagtagcgtctcccaagttttgcttagattactgatgagcgggtacacgtgtttatgtgttttggggatcttgctgtcgcctggggtttctatggtagtaaaggtcatatttaatgatgccccttatcttataattttaggaactgcttgaatatcttggaatgcctgtgctgcgggcaaaaggtgaaggtgaagctctttgtgctcagttgaataatcaaggccatgtagatgcttgcatcacttcagacagtgacgctttcctctttggggctaagactgtcataaaggttctccgatcgaattgtaaggtaagcagtttatcataaatatgtaactggattgaattgtttgcttcattttctctgtattctgtaatatggtatcacgatgttcaccattttttttcaggaaccttttgagtgctacaacatggcagacattgagtctggtcttggactaaagaggaaacaaatggtagcaatggcacttcttgttggcagtgaccatgacttgcatggtgtgcctggttttggtcctgagactgcacttcggtttgtgcagttatttgatgaagataatgttctagctaagtatgtttaatgatttcattattagtcctcctagtttatttttagtgcaaaatgttgaatttctctggctaattgtctctatacttctccagattatatgaaattggtaaaggggtctatccatttataggagttagtgcgcccaatattgatgatctcccatcaccctccacaaagagtctaccgcgtgcgcgatcaccgcactgctcacattgtggtcaccctggcaacaagaaaaatcatatcaaggatgggtgcaacttttgcttggttgattcattagagaattgtgtggagaagccagctggattcatatgtgaatgtcctagttgtgacaaggtagtgctgtttgttccagagtatattgtaattatgtattcaactgtcagtttctatatatttatttcagcctgcattccaaatattagtgcgcttaatatacaatctgcaatttgtacgagaaactgctgtttacatatgacaaatttatttgataactgccttttgtaacaattatcatattctcagcaataatcataccctgtttgtcaatgtttctgatgtcatcttttaaaccacataatgaggctttatgttgtgtatattcttgtatacttcagtgtttcatggagcataattctcaacatattaataatatcttttttgagatgaatattaggcacgtgatctgaaggtgcagagaagaaatgaaaactggcaaatcaaggtctgtaaaaggatagctgctgagactaactttccaaatgaggagatcattaacttgtacttgaatgatgacaatttggataatggtattctttttcccaataacacttctttcaatatttcttactgacgccgttattttagaatggggactgctttggccatctatatcttgtctcattttactctacaatactgtatttgcttgcattggtatctggtatttacctctatgttcaatttgcagaaaatggtgttccattgcttacatggaataaacctgatatggagattttggttgacttcttatctttcaagcagaactgggagccagcgtatattcgtcagcggatgcttcctatgctatcaaccatatatttacgcgaaatggcttcatctcaatctaaatcatttcttctttatgatcaatataaatttcattcaatccaacggattaagataagatatggtcacccatattacttggtcaagtggaagagagtcactcgtagtatgatatccaatgatccacctagcaagcagacagaattggaggggaagaatgataaggtggaggtattggatggagatgatgaggtagtagatgaagaggaggaggagcctacaatgatttccgaaactactgaactgctagatgagccagatgttccacaagtactggatgatgataaagattgctttttattaactgatgaagacattgagctagtgaatgctgcatttcctgatgaagcacaaagatttcaggaagaacaggtatgcattggttgctttcttcagataatttaaaatatgcatgatacttccaggacacatcagtcagttactgaaatagaaagatgaatcatgaatcataaagataattgcactgtgttcaatggccctgttttaaaaatgctaggttcactttgttggtgcttttgtcagttactgctgaggcttgaattgtcatgtttctttctaatgtggtatcatatagttcaatcaagttaaattgcttatagtatatgatttatatatgacatatcagcatctatttgtttaaaagaaaacttttgctgactgcggttgacacaaatgcaacgaattcatgcagaggctgaaagaagcaaagtcaatagcacggaaatccaagctcaacgtggcaggtttcgaaacaccaaaaggtccaaggcctagtggagttcagcttagcatcaaggagttctaccgctccaagaaagggctgagtggcgactcagggaaggacggctcaagaaaatcctccgatgtggacctcagcaagaacttgcccaagtctgtccgacgacgcctcctcttcgactgactgacaattggtctcccttctgtcttcccagtagtcctgctgctactgttgtacatgttccagtaacatttctttcggccaatggatgtacattgcgtggcccggtttttgtacagggaacatgcatgtcttgtagctgatgagaaacagtgttttgggggttgaatcttgtatctgctgcaaccatgtatatttcatgccatatcgcatcactgcttgcgtagcatggaagaattggacctg</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001070244.1 RefSeq:Os09g0521900]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 9]]
 
[[Category:Chromosome 9]]
 

Latest revision as of 13:04, 11 December 2016

The rice Os09g0521900 was reported as OsGEN-L in 2005 [1] by researchers from the Japan.

Annotated Information

Gene Symbol

  • Os09g0521900 <=> OsGEN-L


Function

  • OsGEN-L plays an essential role in DNA metabolism required for early microspore development in rice.


Mutant

  • To elucidate the function of OsGEN-L, the researchers generated rice OsGEN-L-RNAi transgenic plants in which OsGEN-L expression was silenced. Most of the OsGEN-L-RNAi plants displayed low fertility, and some of them were male-sterile. OsGEN-L-RNAi plants lacked mature pollen, resulting from a defect in early microspore development.


Labs working on this gene

  • Laboratory of Plant Molecular Genetics, Nara Institute of Science and Technology, Takayama 8916-5, Ikoma, Nara, 630-0192 Japan
  • Laboratory of Microbial Molecular Genetics, Nara Institute of Science and Technology, Takayama 8916-5, Ikoma, Nara, 630-0192 Japan


References

  1. RNAi-mediated Silencing of OsGEN-L (OsGEN-like), a New Member of the RAD2/XPG Nuclease Family, Causes Male Sterility by Defect of Microspore Development in Rice


Structured Information