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| − | {{JaponicaGene|
| + | The rice '''Os02g0735200''' was reported as ''' OsGS1''' in 2011 <ref name="ref1" /> by researchers from the Japan. |
| − | GeneName = Os02g0735200|
| + | <br> |
| − | Description = Glutamine synthetase shoot isozyme (EC 6.3.1.2) (Glutamate--ammonia ligase) (Clone lambda-GS28)|
| + | ==Annotated Information== |
| − | Version = NM_001054580.1 GI:115448530 GeneID:4330649|
| + | ===Gene Symbol=== |
| − | Length = 3696 bp|
| + | *'''Os02g0735200 <=> OsGS1''' |
| − | Definition = Oryza sativa Japonica Group Os02g0735200, complete gene.|
| + | <br> |
| − | Source = Oryza sativa Japonica Group
| + | ===Function=== |
| | + | *'''OsGS1;1''' in coordinating the global metabolic network in rice plants grown using ammonium as the nitrogen source. |
| | + | <br> |
| | + | ===Mutant=== |
| | + | *The researchers carried out quantitative comparative analyses between the metabolite profiles of a rice mutant lacking OsGS1;1 and its background wild type (WT). The mutant plants exhibited severe retardation of shoot growth in the presence of ammonium compared with the WT.Overaccumulation of free ammonium in the leaf sheath and roots of the mutant indicated the importance of '''OsGS1;1''' for ammonium assimilation in both organs. |
| | + | <br> |
| | + | ==Labs working on this gene== |
| | + | *RIKEN Plant Science Center, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama 230-0045, Japan, |
| | + | *Kihara Institute for Biological Research, Yokohama City University, 641-12 Maioka-cho, Totsuka-ku, Yokohama 244-0813, Japan, |
| | + | *Graduate School of Agricultural Science, Tohoku University, 1-1 Tsutsumidori-Amamiyamachi, Aoba-ku,Sendai 981-8555, Japan, and |
| | + | *Graduate School of Pharmaceutical Sciences, Chiba University, 1-33 Yayoi, Inage-ku, Chiba 263-8522, Japan |
| | + | <br> |
| | + | ==References== |
| | + | <references> |
| | + | <ref name="ref1"> |
| | + | Metabolomics data reveal a crucial role of cytosolic glutamine synthetase 1;1 in coordinating metabolic balance in rice |
| | + | </ref> |
| | | | |
| − | ORGANISM Oryza sativa Japonica Group
| + | </references> |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| + | <br> |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| + | |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| + | ==Structured Information== |
| − | |
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 2]] |
| − | Chromosome = [[:category:Japonica Chromosome 2|Chromosome 2]]|
| |
| − | AP = Chromosome 2:31561641..31565336|
| |
| − | CDS = 31562069..31562221,31562405..31562564,31562658..31562749,31562837..31562911,31563039..31563167<br>,31563284..31563371,31563486..31563592,31564013..31564061,31564170..31564273<br>,31564476..31564515,31565206..31565279|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008395:31561641..31565336
| |
| − | source=RiceChromosome02
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>| | |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008395:31561641..31565336
| |
| − | source=RiceChromosome02
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atggcttctctcaccgatctcgtcaacctcaacctctccgacaccacggagaagatcatcgccgagtacatatggatcggtggatctggcatggatctcaggagcaaggctaggactctctccggccctgtgactgatcccagcaagctgcccaagtggaactacgatggctccagcaccggccaggcccccggcgaggacagtgaggtcatcctgtacccacaggctatcttcaaggacccattcaggaagggaaacaacatccttgtcatgtgcgattgctacacgccagccggagaaccgatccccaccaacaagaggcacaatgctgccaagatcttcagctcccctgaggttgcttctgaggagccctggtacggtattgagcaagagtacaccctcctccagaaggacatcaactggccccttggctggcctgttggtggcttccctggtcctcagggtccttactactgtggtatcggtgctgacaagtcttttgggcgtgatattgttgactcccactacaaggcttgcctctatgccggcatcaacatcagtggaatcaacggcgaggtcatgccaggacagtgggagttccaagttggcccgtctgtcggcatttctgccggtgatcaggtgtgggttgctcgctacattcttgagaggatcaccgagatcgccggagtcgtcgtctcatttgaccccaagcccatcccgggagactggaacggtgctggtgctcacaccaactacagcaccaagtcgatgaggaacgatggtggctacgagatcatcaagtccgccattgagaagctcaagctcaggcacaaggagcacatctccgcctacggcgagggcaacgagcgccggctcaccggcaggcacgagaccgccgacatcaacaccttcagctggggagttgccaaccgcggcgcctcggtccgcgtcggccgggagacggagcagaacggcaagggctacttcgaggatcgccggccggcgtccaacatggacccttacatcgtcacctccatgatcgccgagaccaccatcatctggaagccctga</cdnaseq>|
| |
| − | AA = <aaseq>MASLTDLVNLNLSDTTEKIIAEYIWIGGSGMDLRSKARTLSGPV TDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRKGNNILVMCDCYTPAGEPI PTNKRHNAAKIFSSPEVASEEPWYGIEQEYTLLQKDINWPLGWPVGGFPGPQGPYYCG IGADKSFGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISAGDQVWVAR YILERITEIAGVVVSFDPKPIPGDWNGAGAHTNYSTKSMRNDGGYEIIKSAIEKLKLR HKEHISAYGEGNERRLTGRHETADINTFSWGVANRGASVRVGRETEQNGKGYFEDRRP ASNMDPYIVTSMIAETTIIWKP</aaseq>|
| |
| − | DNA = <dnaseqindica>3116..3268#2773..2932#2588..2679#2426..2500#2170..2298#1966..2053#1745..1851#1276..1324#1064..1167#822..861#58..131#accaccctccttgttacagctgtgccgcctcttgcttcctcctcctcatcgtccgccatggcttctctcaccgatctcgtcaacctcaacctctccgacaccacggagaagatcatcgccgagtacatatggtactatgatattattgttatcttcttcttcctttcggatctcttcttggctcttggttttgatggttcttttcatggcgacgaacgggttattgttttcttggttttgatgggtagggatatttcgggggatttcgggaggggtgctcctcatagtttgtgcggattcgtagaaggtttcgtttcttttcgcttttccactcgatgactgaagcggcggcggcggcggcggtggtgatcttgttgttcttctcttcctctcctctgctttctcctgttcatgtcaccaccgagtaaaaatcgttcttttccgtttcttttttttttcgccgtggattactgttcaaccccggttttcttgatacgcttgacgagagatggagattacgagtacgagcagtactctcttagtttttgtccttttgggggaggatgatctctgaagtggcagcctctgtctgccacctggtcctctctgcgccaccatttggccacggcgagatgctctcttgttcggttggtgcatggatttaaatctcatcccctaatcacgcgtacttttggtcaaagatgcaaagctttcgatcttaaccaccttcagatcgcaagattactgttttttggtgctcattaagccatggtgataactgataagtggtgtttttctttttctccttgtttttaatgcaggatcggtggatctggcatggatctcaggagcaaggctagggtaagataagattcccagaacaaggaccccatgatcctgtttgttactactcatatgtcttatcactttttctgccaagttatccactggctgagctgttcttgcgcttatattatcatccagagccttgctactcctaaacagattagattctcttttttttttatcaatcatattaaattttggttggttggtggtgcagactctctccggccctgtgactgatcccagcaagctgcccaagtggaactacgatggctccagcaccggccaggcccccggcgaggacagtgaggtcatcctgtagtaagtatcttttcatggcaaatcagagtgaaaaaaataaactctgtttttttaattatgtttttactttggatgcaagcagtaattttttgttcttccatcttgcagcccacaggctatcttcaaggacccattcaggaagggaaacaacatccttgtaagtggtgaccactttttcagtttgtcatggatgtgatttatattctgcagtgtacatccatctctgttcatccagatcagcacatgtctataaaaactgtgtgctgatttattcggttcaaactacatatgggatgtactagtagatgcaccactgaaggggggaaaaacttaatttaatcacttcaggtgtaaaagatgaactattttttgcactgttgaacattaaattttctttttttacctgtttctgatgtcatgggatgtgatcttgattagcgctttcactgtatttttgactcctgcgatcatctgttctacctaaccttatggctagttgaggaatgaatccaatgggttgtttcgtcaccatctcgaataattggcactttattttctaaattatcgtaattcacaggtcatgtgcgattgctacacgccagccggagaaccgatccccaccaacaagaggcacaatgctgccaagatcttcagctcccctgaggttgcttctgaggagccctggtatgcccactaatcttttttgccgaatgattatcgcaacgtgtcacagccatctcagcataattccctttctcataatggttagttgatcttctttgttcttgcaaattataggtacggtattgagcaagagtacaccctcctccagaaggacatcaactggccccttggctggcctgttggtggcttccctggtcctcaggtacaatcatttgtctgtttgattgtggcttaattactaaactgatatggtcaaaccaatcttcaagtgtgacctaactaatactgatcttactctttttgtgtgtgcgtattcagggtccttactactgtggtatcggtgctgacaagtcttttgggcgtgatattgttgactcccactacaaggcttgcctctatgccggcatcaacatcagtggaatcaacggcgaggtcatgccaggacaggtgaacactactctcaaaccttgccatttctatcgtcttgaattagtggagtacatttctgaccatgctaatatcgtgatcagatctataattggtaatgttattaacattgtgatcggtttttcagtgggagttccaagttggcccgtctgtcggcatttctgccggtgatcaggtgtgggttgctcgctacattcttgaggtatggataatgacattcttctatcaatatctcaaattgtgattcagaacggtctgatcgaatgccactgcccctaatttttttcagaggatcaccgagatcgccggagtcgtcgtctcatttgaccccaagcccatcccgggagactggaacggtgctggtgctcacaccaactacaggtgagggatgcttgaacatgaacagattgatatggtttgtgttactctttcatattatactactctgctgatcacgatcacgtcggctttcagcaccaagtcgatgaggaacgatggtggctacgagatcatcaagtccgccattgagaagctcaagctcaggcacaaggagcacatctccgcctacggcgagggcaacgagcgccggctcaccggcaggcacgagaccgccgacatcaacaccttcagctgggtacgcgcctccgtcttcttcttcctcctcctctgaaacacctgaaattcatgtcaaattacaagtcccgatcatgaaaaacacctgaaattcatgtcaaattacaagtcctgttcatgaaaaacagctgaatttcatgtcgaaataagtcctgatcatgaaaacacaaacaaatttttgcagggagttgccaaccgcggcgcctcggtccgcgtcggccgggagacggagcagaacggcaagggctacttcgaggatcgccggccggcgtccaacatggacccttacatcgtcacctccatgatcgccgagaccaccatcatctggaagccctgaagcggcttcttgacgccacgacatcctcgtcatcgtcctccccagctcgccgtgtcgctccggttgctccattgatcggacgatctggtgaattgcatttgtgctgggagaagtaaaaaaaaaaggaaagagaaaaaaaagaaaatcacgccaaaaaaaattctcattccatttcgatttggttgcatgctaccactactactacattgctcatctgccatttagattagctcctttttcttcgtcttttgggtgagtgcgtttgggtgctcttgtgtaatcctccaataatggccgtacctacggtacttgtcccatcctgtggatcatcgtcctcctttccacatgtggttttatcatcattgttattagtgatcacctttatataaagttcttgctgggcttccaatagccgtggcttttgcgtt</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001054580.1 RefSeq:Os02g0735200]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]]
| |
| − | [[Category:Japonica Chromosome 2]] | |
| − | [[Category:Chromosome 2]]
| |
