|
|
| (4 intermediate revisions by 2 users not shown) |
| Line 1: |
Line 1: |
| − | Please input one-sentence summary here.
| + | The rice gene Os07g0583700 was reported as '''''OsWRKY87''''' in 2011<ref name="ref1" /> by researchers from China. |
| | | | |
| | ==Annotated Information== | | ==Annotated Information== |
| | + | ===Gene Symbol=== |
| | + | *'''''Os07g0583700 <=> OsWRKY87, OsSUSIBA2-like |
| | + | |
| | ===Function=== | | ===Function=== |
| − | Please input function information here.
| + | * '''''OsWRKY78''''' may acts as a stem elongation and seed development regulator in rice. |
| | + | |
| | + | ===Mutation=== |
| | + | * '''''OsWRKY78''''' RNAi and overexpression transgenic rice lines were generated. Transgenic plants with OsWRKY78 overexpression exhibited a phenotype identical to the wild type, whereas inhibition of OsWR KY78 expression resulted in a semi-dwarf and small kernel phenotype due to reduced cell length in transgenic plants. In addition, a T-DNA insertion mutant line oswrky78 was identified and a phenotype similar to that of RNAi plants was also observed. |
| | | | |
| − | ===Expression=== | + | ===Expression === |
| − | Please input expression information here.
| + | * Real-time RT-PCR analysis showed that '''''OsWRKY78''''' transcript was most abundant in elongating stems though its expression was detected in all the tested organs. The expression profiles were further confirmed by using promoter- GUS analysis in transgenic rice. OsWRKY78::GFP fusion gene transient expression analysis demonstrated that OsWRKY78 targeted to the nuclei of onion epidermal cell. |
| | | | |
| | ===Evolution=== | | ===Evolution=== |
| − | Please input evolution information here.
| |
| | | | |
| | You can also add sub-section(s) at will. | | You can also add sub-section(s) at will. |
| | + | ==Labs working on this gene== |
| | + | * Key Laboratory of Plant Functional Genomics of the Ministry of Education, Jiangsu Key Laboratory of Crop Genetics and Physiology, College of Agriculture, Yangzhou University, Jiangsu 225009, China |
| | + | ==References== |
| | + | <references> |
| | + | * <ref name="ref1"> |
| | + | Zhang CQ, Xu Y, Lu Y, Yu HX, Gu MH, Liu QQ. The WRKY transcription factor |
| | + | OsWRKY78 regulates stem elongation and seed development in rice. Planta. 2011 |
| | + | Sep;234(3):541-54. doi: 10.1007/s00425-011-1423-y. PubMed PMID: 21547461. |
| | | | |
| − | ==Labs working on this gene==
| + | </ref> |
| − | Please input related labs here.
| + | </references> |
| | | | |
| − | ==References==
| |
| − | Please input cited references here.
| |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 7]] |
| − | GeneName = Os07g0583700|
| |
| − | Description = WRKY transcription factor 78|
| |
| − | Version = NM_001066651.1 GI:115473034 GeneID:4343736|
| |
| − | Length = 5473 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os07g0583700, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 7|Chromosome 7]]|
| |
| − | AP = Chromosome 7:24314295..24319767|
| |
| − | CDS = 24314720..24315287,24315684..24315842,24315929..24316094,24316696..24317239,24318243..24318416<br>,24319477..24319722|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008400:24314295..24319767
| |
| − | source=RiceChromosome07
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008400:24314295..24319767
| |
| − | source=RiceChromosome07
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atggccgattcgccaaaccctagctccggtgaccaccccgcgggcgtcggcgggtcgccggagaagcagcccccggtggatcggcgcgtcgcggcgctcgccgcgggcgcggcgggcgcgggggcgaggtacaaggcgatgtcccccgcgcggctgccgatctcgcgggagccctgcctcaccatccccgcgggcttcagcccctcggctctcctcgagtcccccgtcctcctcaccaacttcaaggttgaaccctctccgacaactggtactctgagcatggctgcaattatgaacaagagtgcaaatccagacatacttccttcgcctagggataaaacatctggtagcacccatgaagatggtggctctcgagattttgaattcaagcctcatctgaattcatcctctcaatcgacggcttctgctatcaatgatcccaaaaagcatgaaacttctatgaaaaatgaaagcctgaatactgccctgtcatctgacgatatgatgatcgacaatatacctctatgttctcgtgagtcaactctcgcagtcaatatttcaagtgccccgagccaactggttggaatggttggtttaactgacagctcacctgctgaagttggtacatctgagttgcatcagatgaatagctctggaaatgctatgcaggagtcacagcctgaaagtgtggctgaaaagtctgcagaggatggttataactggcgcaaatatgggcaaaagcatgttaagggaagtgagaacccgagaagctattacaagtgcacacatcctaactgtgatgtaaaaaagctattggagcgttcgcttgatggtcagattactgaagtggtttataaagggcgtcacaatcaccctaagccccaacccaataggaggctgtctgccggtgcagttcctccaatccagggtgaagaaagatatgatggtgtggcaactactgatgacaaatcttcaaatgttcttagcattcttggtaatgcagtacatacagctggtatgattgagcctgttccaggctcagctagtgatgatgacaatgatgccggaggagggagaccttaccctggagatgatgctgttgaggatgatgatttagagtcaaaacgaaggaaaatggaatctgctgctattgatgctgctttgatgggcaagcctaaccgtgagcctcgtgttgtagtacaaacggttagtgaggttgacatcttggatgatgggtaccgctggcgcaagtatggccagaaagtagttaaaggaaaccccaatccacggagttactacaagtgcacaaatacaggatgcccagtcaggaagcatgttgagagagcatcacatgatccaaaatcagtcataacaacatatgaaggaaaacataaccatgaagtccctgcgtcgaggaatgcgagccatgagatgtccactccccccatgaagcctgttgtccatccaattaacagcaatatgcagggccttggtggcatgatgagagcatgtgaacctaggacatttccaaaccaatattctcaagcagctgaaagtgacaccatcagccttgatcttggtgttggaatcagcccgaaccacagcgatgccacaaaccaattgcagtcctcagtttctgatcagatgcagtatcaaatgcagcccatgggttcagtatacagtaatatgggacttccagcaatggcaatgccgactatggctggcaatgcagctagcaatatatatggttcgagagaagaaaaacctagtgaaggttttactttcaaagccacaccgatggaccattcggctaacttatgctacagtaccgccggcaatttagtcatgggtccgtga</cdnaseq>|
| |
| − | AA = <aaseq>MADSPNPSSGDHPAGVGGSPEKQPPVDRRVAALAAGAAGAGARY KAMSPARLPISREPCLTIPAGFSPSALLESPVLLTNFKVEPSPTTGTLSMAAIMNKSA NPDILPSPRDKTSGSTHEDGGSRDFEFKPHLNSSSQSTASAINDPKKHETSMKNESLN TALSSDDMMIDNIPLCSRESTLAVNISSAPSQLVGMVGLTDSSPAEVGTSELHQMNSS GNAMQESQPESVAEKSAEDGYNWRKYGQKHVKGSENPRSYYKCTHPNCDVKKLLERSL DGQITEVVYKGRHNHPKPQPNRRLSAGAVPPIQGEERYDGVATTDDKSSNVLSILGNA VHTAGMIEPVPGSASDDDNDAGGGRPYPGDDAVEDDDLESKRRKMESAAIDAALMGKP NREPRVVVQTVSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNTGCPVRKHVERAS HDPKSVITTYEGKHNHEVPASRNASHEMSTPPMKPVVHPINSNMQGLGGMMRACEPRT FPNQYSQAAESDTISLDLGVGISPNHSDATNQLQSSVSDQMQYQMQPMGSVYSNMGLP AMAMPTMAGNAASNIYGSREEKPSEGFTFKATPMDHSANLCYSTAGNLVMGP</aaseq>|
| |
| − | DNA = <dnaseqindica>4481..5048#3926..4084#3674..3839#2529..3072#1352..1525#46..291#actctcacgagacagcttcccacgcagcgcagcgcaaccgcagcaatggccgattcgccaaaccctagctccggtgaccaccccgcgggcgtcggcgggtcgccggagaagcagcccccggtggatcggcgcgtcgcggcgctcgccgcgggcgcggcgggcgcgggggcgaggtacaaggcgatgtcccccgcgcggctgccgatctcgcgggagccctgcctcaccatccccgcgggcttcagcccctcggctctcctcgagtcccccgtcctcctcaccaacttcaaggtgagctgtgtacctcggccgcgcgtgtagcgtagctatcacccacccatctcctcgcgcctagttactgcgggatctacgaatttcttcggcgcccgcatcgtgccgggggattaatctgtgtcgggggggaaaggagggattccgatgcgcgcattagctttatgcttctagtttatgagacatttgcaccgcggaattggctcgtggcgtcggaataatgcgcttttgctgcgcgctttcgcatttctggtggtgccttgcggtttctggaactgacttttggcggggttcgcgcggatatagttgtttttgctctgtttctccttttggggcgcccctgcgccgtcaattttctgtggagtgaggtgggagctgttgtttgtgcgtttcgggggaattattctgtgctgcacacacttggtggctcgggggaacaaatcatcatgtggcatttttcttgttgcggcctcaaagggccttacataaggaaacgcccccttggctttggctgctattgtgctggtggtgtgcatgctaaggaatgctgctgtttcgtaagggaagcaccaagcactgcaagagagttagtttataggcttggtttagaaatgattgcttcactgatatcgagtgctgggtctggccttaggtgttgtattggcggttctgattcttctcggtgaaaacccacaaattggaatttacttgctgagcatagagtgcttgtttgcagcttcatatcacttgctttctcttggttccttcgttactttgccgaccttcttgatgtttccttttccaaaacatagggatgcttggcaaacaggttttaattaaatgaagaatttatgaaggtaacatttagttgacaagtgtttctggataatttttcatactagaggcataagtattgtactaagcatgacataaatactttctgcaagttactgttcaacatgtacactgtaatactgttgcgcattgttgaatgttcaaaaaattatagagattatgcttaccttgcttgcaaactaattatcaaaatttccctgtttaggttgaaccctctccgacaactggtactctgagcatggctgcaattatgaacaagagtgcaaatccagacatacttccttcgcctagggataaaacatctggtagcacccatgaagatggtggctctcgagattttgaattcaagcctcatctgaattcatcctctcaatcgacggtatggatcctttctttgagtgattacctggtatcgtgtaattcttcatttgtgtatactgtatttgagagtttgaaaaaatttccatagaaaataataacatttgttgtttacaaatggtcccgccaaaacagtggaatttatattggggatgtacataaaaggagtgtaaagttctaatgtgcttatgctaacttcctttccatgatctaaagttgttaccttacggtatgctatttattggatctatattgcattttacttggtaaatctatctgaggttccagcttttgatatttaagttttcctatgtttaattcaaaatattctcacgtgaatcgcaaacctcaccaggagtacaataaattcgttttattattattgtaggctgtgttatttctagtccatggttcggtgtcttgaaatttcagtgccaaaattgggatggatctggttacatcttcaagtctaataaatgatcacaccgactttattgtgtgatttgattatagcagggtcttgcaacataaatacaagctattaattgtgaaaggagaaatgagatctttggtgagatcatgagaatagggtataacagacacaatatttccttgctaggtgagacttgagtggtgctagtctggctgcaaatttatagaagtatgtgaaaatttgaggtcagaatacaagtaattgaatggaccaatctaatgagttctgtagctttagaataattaatgttaacataaaaatatgttcatgaaatcaggtccttctgcattttgttgttaaccgaattccacattcttctttagttctcacaagtacagacaagtatcttgtaatggtggattcttttttggaaaacaaacttcattacatattttgtgtgatccatctatgccttgtgcccttgttacctttttttccctacaccttgttttctcttgtacttagttttgcattgtataaccttttgctgtactcgtgtcttgtactgtaggcttctgctatcaatgatcccaaaaagcatgaaacttctatgaaaaatgaaagcctgaatactgccctgtcatctgacgatatgatgatcgacaatatacctctatgttctcgtgagtcaactctcgcagtcaatatttcaagtgccccgagccaactggttggaatggttggtttaactgacagctcacctgctgaagttggtacatctgagttgcatcagatgaatagctctggaaatgctatgcaggagtcacagcctgaaagtgtggctgaaaagtctgcagaggatggttataactggcgcaaatatgggcaaaagcatgttaagggaagtgagaacccgagaagctattacaagtgcacacatcctaactgtgatgtaaaaaagctattggagcgttcgcttgatggtcagattactgaagtggtttataaagggcgtcacaatcaccctaagccccaacccaataggaggctgtctgccggtgcagttcctccaatccagggtgaagaaagatatgatggtgtggcaactactgatggtgagggttttatcctttgttttaaaaactgatgctggatccctctggtttggcagcttgacctcctgcttcttggatctgattcccccccttttttttgtgaattctcttgctatttatgtcatctctgaacttcttattgcttctcaagaatttcttgcagaattatgattcatattcctttagattcttaaaaaaatgaatgatttgacatataaaacagcgaatgaacgtatagcgtggtggtagagcctccaatagtggggacgccgagtcaccgacctaagctcgaacccaggttttgcaccaaaaaactcccctgcatgaggttgagtgcagcctggctgtgcactgcgtttgggtggttttttttctcaacttagttgaattccacgggccattttaacctgccaatcatttttttttgtaacatacaaaacaaaatttgataagagttttctgagctgtatttgcactccagtacatcactgctggtatatttttgccagtccatacaccgaaggaaaagtcgtgtgatatggatgaatgtttttgttgtgttcttttatgcgatttttaaatgttatgtttttatatgcagacaaatcttcaaatgttcttagcattcttggtaatgcagtacatacagctggtatgattgagcctgttccaggctcagctagtgatgatgacaatgatgccggaggagggagaccttaccctggagatgatgctgttgaggatgatgatttagagtcaaaacgaaggtgcagttcatttgaacttgttacacactagggcgagaatcacccatttatactactgaatgtgttgtttacaactgttcaaacaggaaaatggaatctgctgctattgatgctgctttgatgggcaagcctaaccgtgagcctcgtgttgtagtacaaacggttagtgaggttgacatcttggatgatgggtaccgctggcgcaagtatggccagaaagtagttaaaggaaaccccaatccacggttagttgttattttcttcatctattgctcctagtaaattctcctctttttttctctgacatgtcaacagatttttaacagtaacaacaaaatgttcaataatcttctggtcatgttattttaaatcagaaagataagatttttttgccttatacatatttgtaaaacatgtgtgtcggattgtccggtgatactgctggggagtaaggctgtaggggcttaatgctaagactgggatgccgggcatcacttaattggaaattaggccttctcttaaggctctaatggttcaatataatcagatattttccatcacttattgaataggtgtatgtgtccataacccatatatatacaggatgcaacttgtatattcattttatttcatgattgcaggagttactacaagtgcacaaatacaggatgcccagtcaggaagcatgttgagagagcatcacatgatccaaaatcagtcataacaacatatgaaggaaaacataaccatgaagtccctgcgtcgaggaatgcgagccatgagatgtccactccccccatgaagcctgttgtccatccaattaacagcaatatgcagggccttggtggcatgatgagagcatgtgaacctaggacatttccaaaccaatattctcaagcagctgaaagtgacaccatcagccttgatcttggtgttggaatcagcccgaaccacagcgatgccacaaaccaattgcagtcctcagtttctgatcagatgcagtatcaaatgcagcccatgggttcagtatacagtaatatgggacttccagcaatggcaatgccgactatggctggcaatgcagctagcaatatatatggttcgagagaagaaaaacctagtgaaggttttactttcaaagccacaccgatggaccattcggctaacttatgctacagtaccgccggcaatttagtcatgggtccgtgagagtctatactaatgcttatagctcgagaatcatatattaccaatgcttcgtattgacattctcttcagaaagatgctcctatcattgacacatcagttgaaccggaggcgagagctgtacctgtgggctgcagcaaaatacaccacatgggtcttctggagcggcaaaggccttgttgtatacttgtatgtggcactggccctatattcgttgtacagtgaacccgttaagattaattagatcatcagaatttggttttctttaactatcttcgccttcagtggaatgtggatagaacatggattatggttgatttggttttgtgagcttgtctaattctcttttgtgacaaagctttgtatctcactgcatatgtacaatgccgttggcagtaaagatatgcaaatgtgatacctgtaacacg</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001066651.1 RefSeq:Os07g0583700]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 7]]
| |
| − | [[Category:Chromosome 7]]
| |
