Difference between revisions of "Os11g0684000"

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(Created page with "{{JaponicaGene| GeneName = Os11g0684000| Description = Similar to Transcription factor MYB21 (Myb-related protein 21) (AtMYB21) (Myb homolog 3) (AtMyb3)| Version = NM_00107...")
 
(Annotated Information)
 
(3 intermediate revisions by 3 users not shown)
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{{JaponicaGene|
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The rice '''Os11g0684000''' was reported as ''' OsMPK5''' in 2010 <ref name="ref1" /> by researchers from the USA.
GeneName = Os11g0684000|
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<br>
Description = Similar to Transcription factor MYB21 (Myb-related protein 21) (AtMYB21) (Myb homolog 3) (AtMyb3)|
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==Annotated Information==
Version = NM_001074998.2 GI:297612394 GeneID:4351131|
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===Gene Symbol===
Length = 3014 bp|
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*'''Os11g0684000 <=> OsMPK5'''
Definition = Oryza sativa Japonica Group Os11g0684000, complete gene.|
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<br>
Source = Oryza sativa Japonica Group
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===Function===
 +
*These data favor a model whereby exogenous ABA enhances resistance against C. miyabeanus at least in part by suppressing pathogen-induced ET action in an '''OsMPK5'''-dependent manner.
 +
<br>
 +
===Evolution===
 +
*Exogenous ethephon application enhances susceptibility, whereas genetic disruption of ET signaling renders plants less vulnerable to C. miyabeanus attack, thereby inducing a level of resistance similar to that observed on ABA-treated wild-type plants. Moreover, ABA treatment alleviates C. miyabeanus-induced activation of the ET reporter gene EBP89, while derepression of pathogen-triggered EBP89 transcription via RNA interference-mediated knockdown of '''OsMPK5''',an ABA-primed mitogen-activated protein kinase gene, compromises ABA-IR.
 +
<br>
  
  ORGANISM  Oryza sativa Japonica Group
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==Labs working on this gene==
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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*Laboratory of Phytopathology, Faculty of Bioscience Engineering, Ghent University, B–9000 Ghent, Belgium (D.D.V., M.H.);
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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*Department of Plant Pathology and Huck Institutes of Life Sciences, Pennsylvania State University, University Park, Pennsylvania 16802 (Y.Y.);
            clade; Ehrhartoideae; Oryzeae; Oryza.
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*Plant Breeding, Genetics, and Biotechnology Division, International Rice Research Institute, 1099 Manila, Philippines (C.V.C.)
|
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<br>
Chromosome = [[:category:Japonica Chromosome 11|Chromosome 11]]|
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==References==
AP = Chromosome 11:29513029..29516042|
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<references>
CDS = 29513430..29513973,29514967..29515096,29515716..29515899|
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<ref name="ref1">
GCID = <gbrowseImage1>
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Abscisic Acid-Induced Resistance against the Brown Spot Pathogen Cochliobolus miyabeanus in Rice Involves MAP Kinase-Mediated Repression of Ethylene Signaling
name=NC_008404:29513029..29516042
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</ref>
source=RiceChromosome11
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preset=GeneLocation
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</references>
</gbrowseImage1>|
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<br>
GSID = <gbrowseImage2>
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==Structured Information==
name=NC_008404:29513029..29516042
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[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 11]]
source=RiceChromosome11
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>atggagatggtgctgcagaggacgagccaccacccggtgcccggggagcagcaggaggcggcggcggagctgtcgtcggctgagctccggcgagggccgtggaccgtcgatgaggacctcaccctcatcaattacatctctgatcacggcgagggccgctggaacgcactcgcacgcgccgccggtctgaagaggactgggaagagctgccggctccggtggctgaactatctccggccggatgtgaagcgcggcaacttcaccgcagaggagcagctgctcatcctcgacctccactcccgatggggcaaccgatggtccaagatagcacaacatttgcctgggaggaccgacaacgagatcaagaactactggaggaccagagtgcaaaagcatgccaagcaactcaattgtgatgtcaacagcaagaggttcaaggatgccatgaagtacctatggatgcctcgccttgccgagcgcatccatgccagggctggcgctgttgatgatagcggagactacagcaacaacgacttatcatgtgtatctggtgtaacaatggccactgttgctaattgttttgatggctctccgagcatggtgactagctcatcttccgattcgttcacgtcggagtcacaagatttgaagaagattaacttacatgtgcatggtgatgatgagaagatgaactctgaagactggatgcaggaggtggaccatgagttttggtctacagagattcagcctaataatgaacagtttcaggaccaacagcttaacggttgggtgcaaggtttttctgagggtttgtccgaaactctatggagtctagaggacatatggaagatgcaataa</cdnaseq>|
 
AA = <aaseq>MEMVLQRTSHHPVPGEQQEAAAELSSAELRRGPWTVDEDLTLIN                    YISDHGEGRWNALARAAGLKRTGKSCRLRWLNYLRPDVKRGNFTAEEQLLILDLHSRW                    GNRWSKIAQHLPGRTDNEIKNYWRTRVQKHAKQLNCDVNSKRFKDAMKYLWMPRLAER                    IHARAGAVDDSGDYSNNDLSCVSGVTMATVANCFDGSPSMVTSSSSDSFTSESQDLKK                    INLHVHGDDEKMNSEDWMQEVDHEFWSTEIQPNNEQFQDQQLNGWVQGFSEGLSETLW                    SLEDIWKMQ</aaseq>|
 
DNA = <dnaseqindica>2070..2613#947..1076#144..327#agctgcacccttgcatcttctctctctctctcttcttcttcttcttcttctccatatctcctactcctcgtgaagatcgatcgaccatcggcaatttcattcggtaatagttaagctaagatcaaatcaagattggcgaaacgatggagatggtgctgcagaggacgagccaccacccggtgcccggggagcagcaggaggcggcggcggagctgtcgtcggctgagctccggcgagggccgtggaccgtcgatgaggacctcaccctcatcaattacatctctgatcacggcgagggccgctggaacgcactcgcacgcgccgccggtaagcttctatacctcttatactgccagtaaattgtaccgtaaaagttgtctttgtcgaaaacactagctacttagctgtttaattaacttcgattaactcaaattatcaaaatttctcaatccgcaactccgcaaggtatagctaagatatatacacgtaaatttaattacgctttaattaccagcagagaaaaaaagaaagctaggtatgcatgagcagtgggattaataattaattgggttgggagaattaagcagcaaacttaaccaacaacctgtttatagagtaggttagccaggacagaattttcctttccagtgcagcttagccggcgacgtcagtcacgagtccaatcatttcctccactacctgtcttcaaaactatgtgcgcctccgaccacataattaatcactatagccatgcacagttatcacaaattaaccaatctctcacacaactgttgattaattgtaacctagccatcacgccatgtgtctcacaacatgtactactactccaactaatgagtcaatcaattaatcaactgtgagatggatgctgattaatagtggagagagagagattattgatgaaattttaattgtgcatatataggtctgaagaggactgggaagagctgccggctccggtggctgaactatctccggccggatgtgaagcgcggcaacttcaccgcagaggagcagctgctcatcctcgacctccactcccgatggggcaaccggtaataatcaattaattaattagctcactcgtcattaattaatcttatagaatctagtattcatgcatagatcagaaatgttctcagctacttcctctgtatttttaatatatgacggcattaattcttattataacctttgatcattcatcttattaaaaaaattatacaaatcttaaaaatataagtaatagttaaagttcattaccgataaatcaagccacacggccacaacaaaagaaaatatatttgcttaaatttttactgataaatcaaacataatgtaaaaagtgaacaacataatatattagaagacggaggcactatcgttctaatctaattggctgacttcagtgaagctttcattaacttatagtagtcattaactaattaaatcccttcttaagacctgctaattaaccaccatgctcaccatccagcaaacctcgaggcgacacgtgtcctacactgtagagaagaatgaagactagcttagcttagcttagattaattagctgggagcttaatttgacgcctcgtgatgcagattagactcgtgtagacgccgctagcaagctaagctaaaagtaaaggaaggacatgtcacggtcgtacagacttgtgacgtggacgtgacgtggacttggccgctctcaacacatgtcaactcgtccctgccatgtacaaacgcacgtacgtgacgtgacacactaattcacacactttcagaattttaatcagccaacaatggccggctaattttattcccctgtgcacaaagaaacgcatgcatcgctgacactgaaagatgtaccaccagtttggaatttgcacgcctcctctcttctcatttctacacttgtatgtttgtgtccacccatccatcttaattccttttttttgctcttagcatatttgcactttggttcacaccttggtaacataattagatgtgtgggtttctcatttggtcaattattattgaaactacagatggtccaagatagcacaacatttgcctgggaggaccgacaacgagatcaagaactactggaggaccagagtgcaaaagcatgccaagcaactcaattgtgatgtcaacagcaagaggttcaaggatgccatgaagtacctatggatgcctcgccttgccgagcgcatccatgccagggctggcgctgttgatgatagcggagactacagcaacaacgacttatcatgtgtatctggtgtaacaatggccactgttgctaattgttttgatggctctccgagcatggtgactagctcatcttccgattcgttcacgtcggagtcacaagatttgaagaagattaacttacatgtgcatggtgatgatgagaagatgaactctgaagactggatgcaggaggtggaccatgagttttggtctacagagattcagcctaataatgaacagtttcaggaccaacagcttaacggttgggtgcaaggtttttctgagggtttgtccgaaactctatggagtctagaggacatatggaagatgcaataaattttacatttacaaaggacatatttgtaaaatagaatagagagacatcaaggaaggcaaagagaaaaagttctttagtcatatactgtacgttgagacacttaagttctttgccaacttcaatgttttttttcttttatttttgctgcctctttcgatccctgaaggggtttttgccttctagatgtctaggggttcaaagaggaccagaggagatatatatgtgtttggatatgttgatatatgagctgatatatgccttactatatatatactccagaattgcactgaggattacatatccaattcagacatgcaaaccttaccagttgcaatattgtaaattacatgtccaattttgtagtttcatcttcctcatcataaaaaaattatgttgtgtc</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001074998.2 RefSeq:Os11g0684000]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 11]]
 
[[Category:Chromosome 11]]
 

Latest revision as of 05:51, 12 December 2016

The rice Os11g0684000 was reported as OsMPK5 in 2010 [1] by researchers from the USA.

Annotated Information

Gene Symbol

  • Os11g0684000 <=> OsMPK5


Function

  • These data favor a model whereby exogenous ABA enhances resistance against C. miyabeanus at least in part by suppressing pathogen-induced ET action in an OsMPK5-dependent manner.


Evolution

  • Exogenous ethephon application enhances susceptibility, whereas genetic disruption of ET signaling renders plants less vulnerable to C. miyabeanus attack, thereby inducing a level of resistance similar to that observed on ABA-treated wild-type plants. Moreover, ABA treatment alleviates C. miyabeanus-induced activation of the ET reporter gene EBP89, while derepression of pathogen-triggered EBP89 transcription via RNA interference-mediated knockdown of OsMPK5,an ABA-primed mitogen-activated protein kinase gene, compromises ABA-IR.


Labs working on this gene

  • Laboratory of Phytopathology, Faculty of Bioscience Engineering, Ghent University, B–9000 Ghent, Belgium (D.D.V., M.H.);
  • Department of Plant Pathology and Huck Institutes of Life Sciences, Pennsylvania State University, University Park, Pennsylvania 16802 (Y.Y.);
  • Plant Breeding, Genetics, and Biotechnology Division, International Rice Research Institute, 1099 Manila, Philippines (C.V.C.)


References

  1. Abscisic Acid-Induced Resistance against the Brown Spot Pathogen Cochliobolus miyabeanus in Rice Involves MAP Kinase-Mediated Repression of Ethylene Signaling


Structured Information