|
|
| (3 intermediate revisions by 3 users not shown) |
| Line 1: |
Line 1: |
| − | {{JaponicaGene|
| + | The rice gene Os11g0689000 was reported as '''''PIKM''''' in 2008<ref name="ref1" /> by researchers from Japan. |
| − | GeneName = Os11g0689000|
| |
| − | Description = Hypothetical protein|
| |
| − | Version = NM_001075020.1 GI:115486688 GeneID:4351152|
| |
| − | Length = 10064 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os11g0689000, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| | | | |
| − | ORGANISM Oryza sativa Japonica Group
| + | ==Annotated Information== |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| + | ===Gene Symbol=== |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| + | *'''''Os11g0689000 <=> PIK, PIKM |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| + | |
| − | |
| + | ===Function=== |
| − | Chromosome = [[:category:Japonica Chromosome 11|Chromosome 11]]|
| + | [[File:.png|right|thumb|400px|'''''' '' <ref name="ref1" />.'']] |
| − | AP = Chromosome 11:29823840..29833903|
| + | |
| − | CDS = 29833224..29833293,29833391..29833596|
| + | ===Mutation=== |
| − | GCID = <gbrowseImage1>
| + | [[File:.png|right|thumb|400px|'''''' '' <ref name="ref1" />.'']] |
| − | name=NC_008404:29823840..29833903 | + | |
| − | source=RiceChromosome11
| + | ===Expression === |
| − | preset=GeneLocation
| + | [[File:.png|right|thumb|400px|'''''' '' <ref name="ref1" />.'']] |
| − | </gbrowseImage1>| | + | |
| − | GSID = <gbrowseImage2>
| + | |
| − | name=NC_008404:29823840..29833903
| + | ===Evolution=== |
| − | source=RiceChromosome11
| + | |
| − | preset=GeneLocation
| + | You can also add sub-section(s) at will. |
| − | </gbrowseImage2>| | + | ==Labs working on this gene== |
| − | CDNA = <cdnaseq>atggcagtggcatggattgatgaccagtcttcagaaattccaaccactagccaaacgcatctacgacccacggcacaaacaccgggacgtgtgcctgcagattgcggtgccggcggcggcggcggcgatctggttcgcaccgtcgactgggcttcgattcttcgtcggcctaattcagattggaatctcatcagatacttcatgtggttcctgtgcttgaagccaagtgctggttcttcattggcatccatcgaggattggatgtgcggaaattag</cdnaseq>|
| + | *NARO, National Institute of Crop Science, Tsukuba, Ibaraki 305-8518, Japan, |
| − | AA = <aaseq>MAVAWIDDQSSEIPTTSQTHLRPTAQTPGRVPADCGAGGGGGDL VRTVDWASILRRPNSDWNLIRYFMWFLCLKPSAGSSLASIEDWMCGN</aaseq>|
| + | *Plant Disease Resistance Research Unit, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan, Institute of the Society for Techno-Innovation |
| − | DNA = <dnaseqindica>611..680#308..513#gattccacagctgccaacgcaacgccgacgagaaatccggcgaaccccaccacggccatggattcgccgcctccgccggaaactcgagcgccgcggcggcggcggcggcggcgggcgggtaggagcccacgaggaggggatattgccggtggcggcgcttccttcaccctctcggttgcgtatttgtgctcgcgttcttatctcggccatcgccgtcgccgtcgccgtcgccgccgcggccagatcccctttcccagggaagcgcggagtagagtacatagccagccggccagccagccagccagccatggcagtggcatggattgatgaccagtcttcagaaattccaaccactagccaaacgcatctacgacccacggcacaaacaccgggacgtgtgcctgcagattgcggtgccggcggcggcggcggcgatctggttcgcaccgtcgactgggcttcgattcttcgtcggcctaattcagattggaatctcatcagatacttcatgtggtatactttgattgctgtgctgctgaattgcatgatgtgtttgtgttggtcgatgggacagagcttgatactttgtgtactgctcctccttgttcaggttcctgtgcttgaagccaagtgctggttcttcattggcatccatcgaggattggatgtgcggaaattaggcagacattgctgattgctctctgacgacagcgcgttcgttatgcttcaccacacttctcgatggtttcgagtaccattcatctgtgagaaatctgatccctctctctctttacttgagatatttcagacttgttaattgcttgcagcgatataattaactagttgtttgttgacgttaacatctaaatttagcacctaaagcgaaaatagaaaaatatggttgaatttggaaatgacaatgtttccttccccaggctggtctgattgccaccgtagggctggtcaaactgacggtctgactccaactttaattttgtcgacttcaaaataagtatgacaaaagcagtcaaaattttcagctacacaattcagaacaagcaacggggacaaacgagtaggtggcacggtacagtatacctttggtctttggagttggctgtttcgccaagtgttttctcacatatttagatttcttttttatctctccttctccaactggcccattaatctattgaggttactctaggcaacccaactaacttcgccaggttttatgtaggcgacccatttatacgttaatgacaccagttgccagtatttgtattggcataaaatatagttatattggataagataacgggagaaactagtgcatgcattctgttaaaagtttagctgattaaattaaaaacagaacgaatccggttgaagctttccagatataccttgaaatcaaaattctggcaaataaaaatagaactggacacaaaaatcacaaaattacagtactaatacacaaaattaacataagttttacaactgtaaacatagtgtaaaggctaattttgggcaccaataatagagtagcattaggtctttggtgagtgaagtttctgaactggagcagagtaggcgagaggcagaataggactgagagctgaagcaaaatagagtagttttctgaagctgtagctttcattccaagtgaatgggtgatatatatatatatagacatatagtacatggtcaagtcgggttgctgaaccgacctctactgctgctgtattcagctaggggtaaaatccaaattgctctacctctaatagcagctgtgcagtgtgcacaggaaaagaaaatcaaactgagtgacagctaccaactagctaacataaccaaaagactaactagaacaagaattatactaacagtgagacccaattgcccatcaactgttttcaatagtttgtgaccaatgacagtacaaatctgctcaccagccaaaggctagaaaaaaattgtattcatggaaattgtgacaccataaatatagctatcccatcatttaaagagtttaataactaaataaaaggatcagaatggtttcttgctgggatctcccctttattaagagaaaacagagatgaacagacactataacgacaagtgaaatcaaactactacgggaccatggtaagaggtaacatatattccatgccatcctattttatttagccaggagagtaataacagaaatatattatcctttcaaaaaaaaaacagaaatatattagaagagagtaatgatagaggggcagcatcagatgattggcaagttctcctatttgcaacaatttaacttctcatgcagtgacgatgccatcaacaaatacttttggtttctcagtattatccttcaaatcacttactaggaacttggttattgcttctgccccatcgctaactttgagatgcacctcacggagattttcaaggatttcgatgccgaatagaccctcaaattcttgaaaccgcatttcaatgatttcgagtgctggcattgcactcttgtccggaaagctgagctttggcacgaaaggtgcaaagaagcgaagcagcttaagactcttgaattctttagctggaatgacgatttccccgtcagtggccaatttattgtcctcaaggatgccctttactgtgtcctgatcttgcttcgctgcactaagtgaaaaggcaaaggtgagggaaaacaatgaaggtaaattgcggaggatctccaaagtttcagtcgtaagaactgttatagatatggttaacttgttgagagtagtaatgctggtgatccactcaggtagccatttcaacttgccggacagctcaagggagactagatatcttggaggtgcagacatgttgtatagtgagttgataaatttagaattctcatcattgatggccagagtctgcaggccgcagctgccaaggtactcaatagaggagagtaattctttgaatgtatcattttcctcgcttattttgagcttgtatatggcaagcttccttagtcctgtcaactgatgaaggcttgcagctactgctgctgattcatcaacgatctcaatccctgacagtacacggagtgacttcattgtgcctttagctttttcttgggacaagaatcctttctctgcaggctcctttgttttaccttgaggtgacgggtttttcattgccttatttcttttttcttgaggcaacctcagccccttccgtgtatttttgttccccccaagtatgctactgatccgttttagctggcctacagacttaggcagctcctcgacatatgtctcccttatgtcaagagtttccaaatactcaagtttctcaatctttgagggaattttggcaatttctgtccgccggatgctcaaatacttgagtacaagcatttgacatatctccgtcacatgtctctctttcaaacccttccaaccctcaagatccagcacctgtattatcccatagttgaatgaatggaatggaacatggttcaggttcccaaacaccgtcagtgatcgcacttgagccaagttcaggccttttgtagaatttccatgcttggatccactgctttgcaacgatagtcgacggactttattgcttggcgcagtcatctgccagtgtccaccaaccacagtaataaaattctcttcgattgacttcgacatgatgtattcaagaaccatgtcatgaacttgaaaggcttttaccttcccattgctgccatgctccacagggcgtattaagttccttcttgcgagctgattaaagtatgcctctgcaacttcctcttcggttagcccttgcttctcagtagcaaaaccttcagcaatccatcgtcgggccaaccgcttcctactaattttccaaccctttggaaatatactcaagtacaataagcaggtcttgagatctgcaggcaaatcattgtaacaacaatccagtatcctcgtaaccccatccaggttaagagtagttactggatatggaaataatgattcgcaaagtttactccaatcggagttggctttgtttgggttgcaggctacaagaccagccatggtgacaatggccaaaggcaatcccccacatatctttgataacttcttgtctctatctgttcttttcattgggtcaggaatgcttgcattaaataaatctaggggcttgtcacctgtgagaaaatcaactttatgcaaaagatcctttccatgtccaggggaggatgtggcctcatcatttttatgtctaggggagcatgtggaaccaacagcatgaaatcttgtagtcactattattctgctgtctttatcattttcagaaggcagaaacggtatgatgatactgttccatgtcttggcagaccaaatatcatcaatcaagaggatatatctgtatagatgatgaaaagaaaacgagcacacatcagagaaaagaaaagtaccgttcaaaaactggtgtggtgttgtgtgtagaaggaaataaacatatggatttacaattaagttaattggcatatgagcaaaacaaatgtttacgaacagggtacctcttttcggccaggcgccgtttcagttcttcgcggagctgaagagagcccattgtttcctgctgcctgaccgatgtcttatcatcattccctccgagtagtgacagtggtagggctttcttcaacttgttcaacatccttttagtgcctgactcggcagtgttctcctctctacttgatgtgctactgctgccctggggttccctggtgttctcatctctactactactttctgtgctgccaccggcctcctcctgtttgctgacttgattcagaatactcctgaggacttcgtcttcatcatagttctgagacacagcgactgacgcctggcagtcaaatttaccactgacttttctgtacaatgccatggcaatggtggtcttccccacaccaccgaaaccgacaatggacagaacagctcgccccttatcaggttgaggttcggttagccacttctcaaggttttccatgacagtcttcatccccacaggctcctttatactgacgatctgaggttttgtgtcctgatactcagcaatgtcttgagccgcagcatgggctctgggtctgggactgttgctgctgtcacagtgttctgggttgttcactccatatctgttgcgccgatccgcgatctgttgcgcccgtaccttgagttcagcaattctcgaagcaatatcgcgacgaggccaccatgtcaagagttcatacatttttgtgagtatgaaggagcatttggcatcgctgattgaatcctgggggagccggtgcgcaaagtcatcgatgcagtcctcaacgtcataggcgacgtctcggatctgcttcatccagtccttcctccggttgtcatggttgtgaccctccgtcacaacgctaaggtcacggaggaaggcctgcatgctggcaagctcgtcattgatgtactggatgtcaccacggacgccgctgaccagagaatactcctgggcaagaaggttgcccagcttgcccaggagagatctcatggtggcttccgaagcacctaccgccaactccatcgtcgatcttgttttctgtataataattcactgcaactttcagctcttgcaagcactggagtggagagtgtgagtgacacacacacggtacgttgagatcaagcactgaaccccagctgagagtttccttggcctgcccagggaaaaggagaaaaatgaaaacgaaaaccaaaccatacagtgaatgaataatcattattaataatacttggaacgtaattttattttcaggagcgctttttgtccagtgctacctcatgtaaatatgttttttttcttctaattttataacttatagatgctctatcaatattcttctattacgcaatacctctttgatgcatgcatattcgtaagaaataataacttacagtacacaaactgaaatcgagtgtgaccaattcctgtgaacatgcaaataaattgtctaacctatgcaaatgtaccaagcagtaaaaagcgttactttccttccactgaaattttaccaactgcacccctcccaatcaaatgaacactacatccttgtttctctcccaacttttttcctcctccaaggttcaaagataatggtgcctataccttcattgcttgcagtaaggaaaagcccaggagtgaaaagattgttcaccttggcaaagcacggaagatcttggcagcagacacatcaactggtggctggctaacatggcaaggattcttcagaagctctaagagatctcaagacgaaagtaaaactggagggatggccgggcatgggcacggggcacccatggaacagaagccaacgggggaacaggcttgggcagccgccgtcgaaagggacagagaggagagcagcgcagcagctagctagaagttttgggcggaggcctcagcggcctacagtactgtagagtgcagacgcatggtcatggacttctccctgaaaaataaacagggggaaaaagaacggcccatggtttacggttcaggtgtccttataaaggggtctattttaaatgatctatttgaaataaatcttaaaaatatttttatgttaaaatagaacccttaactattaggaaaaagtccaaataaccccctaaactttggatggaagttcgtctagcactctaaactttaaaaccagatattcaaccaacctaaactttacaataccgtttatataaccccataagatgattttgcatagtgatttttatctaatttatatataagttggatgagtctgagctttggacatatatatatatattaaaattttaactgaaatatttctttttgcttcatattaactcttacttacaaacaattgtatcaagatgataatagtatgatatcactgtacaaaaataaattaataacttataactgatgatatgcaaatatattatattagttatttaaaattattcgtttaagcttctaaaatatgcaaagccatcatcaaactaccttaggagctaatatggatggtatggcaaagttcggaactcccgtttcgcaacttttgctccgcgagcacgtttcacgaactgctaaacgatacttttttttaaaaaaaaattctatagaatagttactgcagaaaatcatattaatctatttttaaagttttttagccaatacttaattaatcatatgttaatgagctacctcgctttctgtgcgaagtgaaaagctactttagaacatcttaatcctgtgcataatagcttctcatatacaccaaaagttatagaaatagcattgcatctatatataaagtctcatcttcttattagtatattttatttagctgctctaagttggtgcaggcgggcgctggtttggcactaagataaaaacaatcatcggatgctcacttaactcgcaatccaccctaccctagtgaccaccagtccacaagcagcacctatagctaactattagtgagagaccaccgacccaaaatcagtgcgaggcggtggcgagcggctcccatggccgtatacagcgtcgccacgggggccttggctcccgtcctatcgaagctctccgctttgctgggcgacgagcacttggatcttgcggagaggacccggagcgacgccatgttcatcaggtcccagctggaggccgtgcactctctcctcctcccgaggattagttggggaatgacgggggaggaagtcgatgctttgtgcaaggatgagttgatggcggaggtgcgtgagctgtcctacgacatggacgacgccatcgacgaattcttcttagaggagcccatggcgggcggcgacggtggccctttcgatgagctcaagacaagagttgaggatgtctccaagcggttctccgacagccggcggtggaggccaccggtggagcaacatcaaccatccctaaccgccgcaaccgtagactgtccacctcctcacgctcgcttcgtccacaacatgatggatgtgtcagagctcgtggagatggacaaacaacatgagaaagagctcatcaaattgctggaacaaggtgcggacacaagcatatatgcttcccggtggcgcatcgcaacaccatggcatgataaggaggtaaagacgacatccttttatttcttttttatctctacttctctatttatatattatattatattatattataaaaatttaaaatgttttcgctgtgtgtattttggtacgtcgtggctatcttcgtatcgtattcgatctcccgttcagtatattttgtgttgtacgtctctagcttccagatatatcatatatctttccattcccatgttattctttctttccaaattccaattattaattatacctcatttaatgagggacatttataccattttatttcagtagtaatttcatcctttcctagtgctagaagtgcacttgcatgaggatggaggcaaagctgaaatacccattcgttgtgatgaaattttaaaagcgaaccctaccgtaaactctaaattaagccccaaaaattataatgcaagtattcctgttttaatcaatatttggcatcatttttttacaatgtataattcagctacacaatttgctcatttttttttacaattgcttataattaagctacacaagctaccaattcagctacacaattggcacatactactatactagccaaatacccgttattttctacgtattaaaacaaattaatagtgagatttttggggcaattaatttggttttgtagaagttatatcatagagaaattattttataacggtaaagttggttgaaaatatgatggagaatgtggtaaataaaaaaaatactatagttggtggcagattcactgccaccgccattgccctcttttgaaaggaatatagaattttatcttgtagaagttatattgtacaagtgaaatatgatggaatcatatatgtagaataaaacattaaagtatgtgggggtatttggttgaaaatatgatggagtatgtggtaaatagaaaaaaaatactatacttgatgatggggcgatgatagattcactgccaccaccattgcatttttttaaaaggagtatataaacatatataggaacccacctactcattacttggtaagaggtcttacttggtaattgtgctggacggtagtatgccagtttaccattcatcatcattattggattccttttttttcttaaaaaaaggtataatatgatatgcaacttcttaattgctttatttcttttctagattaattttagataaaaattttattggatatggatcagctagcgtagtaaaaagtgaacgatacatgagaaaaaagattgatttgacaaaacaaaaacacaacccattaaattggagtgtcttattcccgtagactgcagtaacagaatggttcgatgatcaactaatgttttttgctgcagcaaagtactgtggtcaaggtgccggaaagagagtggggcttcccggacaatcggaacagtccatttatatgggcgagtgattcgtttgaacgattgcgttcgggaagtttgtgtggagatacgttgcggttggatggtgaaggcgcgaacatccgcaagctcttgtccaccctccggaataaggtgggccgcgcccagttggtgcaggtcgaggataagagaaaaagggtagaggaggcgacgaagccttgtgaatttcacgaggtcaaaacaatatgcatccttggattgcctggcgcaggcaaaacaactcttgcaaaactgttgtactcccatcactcaacgacagagcagcaattccaacaccgggctttcgtgtcactctctccgggtgccaatctcaccgacactcttactgatattttattgcaagtaggagcatataatgatgatgcaacaccatattgtgggaccggaacaccgcaccaacagtatctcattgacaatatatcagcttatctcattggc</dnaseqindica>|
| + | of Agriculture, Forestry, and Fisheries, Tsukuba, Ibaraki 305-0854, Japan, |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001075020.1 RefSeq:Os11g0689000]|
| + | *Plant Genome Research Unit, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan |
| − | }}
| + | *QTL Genomics Research Center, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan |
| − | [[Category:Genes]] | + | ==References== |
| − | [[Category:Japonica mRNA]]
| + | <references> |
| − | [[Category:Oryza Sativa Japonica Group]] | + | * <ref name="ref1"> |
| − | [[Category:Japonica Genes]]
| + | Two Adjacent Nucleotide-Binding Site–Leucine-Rich Repeat Class Genes |
| − | [[Category:Japonica Chromosome 11]] | + | Are Required to Confer Pikm-Specific Rice Blast Resistance |
| − | [[Category:Chromosome 11]]
| + | </ref> |
| | + | </references> |
| | + | |
| | + | |
| | + | ==Structured Information== |
| | + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 11]] |