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| − | {{JaponicaGene|
| + | The rice '''Os02g0306401''' was reported as ''' naat1''' in 2007 <ref name="ref1" /> by researchers from the China. |
| − | GeneName = Os02g0306401|
| + | <br> |
| − | Description = 1-aminocyclopropane-1-carboxylate synthase family protein|
| + | ==Annotated Information== |
| − | Version = NM_001185987.1 GI:297721106 GeneID:9267778|
| + | ===Gene Symbol=== |
| − | Length = 5494 bp|
| + | *'''Os02g0306401 <=> naat1''' |
| − | Definition = Oryza sativa Japonica Group Os02g0306401, complete gene.|
| + | <br> |
| − | Source = Oryza sativa Japonica Group
| + | ===Function=== |
| | + | *'''NAAT1''' disruption of deoxymugineic acid biosynthesis can stimulate Fe(II) acquisition and increase iron accumulation in rice. |
| | + | <br> |
| | + | ===Expression=== |
| | + | *The researchers identified a point mutation in a gene encoding nicotianamine aminotransferase ('''NAAT1'''), which was responsible for the mutant phenotype. Because of the loss of function of '''NAAT1''', the mutant failed to produce deoxymugineic acid and could not absorb Fe(III) efficiently. In contrast, nicotianamine, the substrate for '''NAAT1''', accumulated markedly in roots and shoots of the mutant. Microarray analysis showed that the expression of a number of the genes involved in Fe(II) acquisition was greatly stimulated in the naat1 mutant. |
| | + | <br> |
| | | | |
| − | ORGANISM Oryza sativa Japonica Group
| + | ==Labs working on this gene== |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| + | *The State Key Laboratory of Plant Physiology and Biochemistry, College of Life Science, Zhejiang University,Hangzhou 310058, China (L.C., F.W., H.S., F. Huang, L.Z., F. He, J.L., P.W.); |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| + | *Rothamsted Research, Harpenden,Hertfordshire AL5 2JQ, United Kingdom (F.-J.Z.); |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| + | *Research Institute for Bioresources, Okayama University, Kurashiki 710–0046, Japan (D.U., J.-F.M.) |
| − | |
| + | <br> |
| − | Chromosome = [[:category:Japonica Chromosome 2|Chromosome 2]]|
| + | ==References== |
| − | AP = Chromosome 2:12026136..12031629|
| + | <references> |
| − | CDS = 12028902..12029306|
| + | <ref name="ref1"> |
| − | GCID = <gbrowseImage1>
| + | Mutation in Nicotianamine Aminotransferase Stimulated the Fe(II) Acquisition System and Led to Iron Accumulation in Rice |
| − | name=NC_008395:12026136..12031629
| + | </ref> |
| − | source=RiceChromosome02
| + | |
| − | preset=GeneLocation
| + | </references> |
| − | </gbrowseImage1>| | + | <br> |
| − | GSID = <gbrowseImage2>
| + | ==Structured Information== |
| − | name=NC_008395:12026136..12031629 | + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 02]] |
| − | source=RiceChromosome02
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>| | |
| − | CDNA = <cdnaseq>ttaatcttgtgcctttcttttgaatatagtgctgtggcagatcatttgtcacgcgacctcccatacaagctatcttctgatgacatcttcctaaccgctggaggaactcaggccatcgaggtcgtaatctcaatccttgcccaacctggcacaaacatattgcttcctagaccaggctacccaaactatgaagctcgagccgcgttcaacaaccttgaagttcgtcactttgatcttattcctgagaagggctgggagattgaccttaactccctagaatctattgcggacaagaacactactgcgatagtcatcataaatcccaataatccatgcgggaatgtgtacacttacgagcatttatccaaggttcagctggtttatttaaatttgataaaagtttaa</cdnaseq>|
| |
| − | AA = <aaseq>LILCLSFEYSAVADHLSRDLPYKLSSDDIFLTAGGTQAIEVVIS ILAQPGTNILLPRPGYPNYEARAAFNNLEVRHFDLIPEKGWEIDLNSLESIADKNTTA IVIINPNNPCGNVYTYEHLSKVQLVYLNLIKV</aaseq>|
| |
| − | DNA = <dnaseqindica>2324..2728#aggcgcgcatgcatgcttcatgctgctgtgccccacccgagtccgtgtcccacacccgtagaatctcctacaaatatagcggcactagctatccgacgcgcaccaccaccacctcctcctctgcaccggaattcaccaacaaaaaacagagcacggccatggcaccgacgacggcggcggcggcggcgagcagcaacggcggcggcgagagcgacggcagcagcaaggagtggaggctgacggcgccgacgaggggcggcgcgatggcggcggcgggggacaagatgagcatccgggcggtgcggtacaagatcagcgccagcgtcgacgaccgcggcccgcgccccgtcctgccgctcgcccacggcgacccctccgtgttccccgagttccgcaccgccgccgaggccgaggacgccgtcgccgacgcgctccgctccggcgacttcaactgctaccccgccggcgtcggcctccccgccgcgcgacggtaccacccacgccatccacttccgttttttttttgttttcattattttccggcgagttcaaatattcggttttggttttatgttttttttccgcttccgtttctttgccgattaattgttcgctacgtgtgcatggttcatgtttgccttttatggcctttattaaaattagtttattaaattttctcaactatttgtttgttaacgagaactagcaagctgagccgaggcgagccatatatagtgaggccagttttcgttcaaaattgaatagtttagtttaaaaaatttatcaactagagtactttcgaatcgagccagtgataacacgtatttactaatagtgcttattttattcattaatgataattataatacgaattatacgaatagtgtttagggactggttggttcatttgcttattttgtgtgccaaacagcatatatcaccaatttagcaagctatagtttttcgacactcgacaaaaagctcgccacacttatggccaaaataaatcagcttgcaaattgagtctataagcaaatctaaaaacgctacaattgcagttataagccaaacgttttgccagaagaaccggagctgcctactttagacgtgataaagtttggcaataaactaaaacagtcccctagtctgcgtaccattctttgtttactaacaaaagcgtgctactttacccaccagttatataatttgttcactttgatccgattcctattttgcaacatgtacgggtgatatatatttcatatacacatcatcaggcacctataattaagctgcatgggtcttctctgttgtagtgagcacactttggtcataattttaaggactgtagcactgaaaaatagatttatttgaattttttaaacaacttgcacatataatttttttatgaaaatatataattttacagtttgaaaagtgtgctaatgaaaaatgagaaatttggagttcagagttgaaaaaaagaaccggcaaaacaacaaccccatatgcaacacgaggtcagtagggtcacaactcacaacctccctgtaatgtaatcccggggaagatttgtttcgattcaaacccatatagaaccatggatttaattgaatttaaactggatgaagaaaacaattattgaagtagtgttattacacatgtcacatgtgcgcgaatactgtattggcgtcgatctcgaggcgtactactcccgtggtcggcgagagctagtaggggaggagaactgaagtggaaccaacggctggcgatggacgggacgtacggcccgagcggcgcacgcgcccgcggcgggggagcacgagccccgcgtcgtccacgcccgcccccaccgcgtgctggcacgccccccggctgctgcggctcgtccgacgtggcgggcgcacagcctggatggagccttcattgtgcatctgtgctagctgtaggactgaaggctgtagctgctggatttctgggggaaaaaacaaaagaaagaggaggaaaagaaaggaaggaaaatgtgctctcttttgaattgagaacaatcgtgccttttgtggactagaagcaggggagaagaatatatagtccaataattcggtttttctgggttgatgatgcatttcttctttagaaaggattttacatgctgttttttttaataatggcatgttgttcattatgttttttttttcatgtatgattattaattaaatgttttatttgcgccgaggatgcagttcttcctgaaagaggcatttacgtgatgttggttcatgcttgcttatgtgattgttaattatatcataatatatcttgattaatcttgtgcctttcttttgaatatagtgctgtggcagatcatttgtcacgcgacctcccatacaagctatcttctgatgacatcttcctaaccgctggaggaactcaggccatcgaggtcgtaatctcaatccttgcccaacctggcacaaacatattgcttcctagaccaggctacccaaactatgaagctcgagccgcgttcaacaaccttgaagttcgtcactttgatcttattcctgagaagggctgggagattgaccttaactccctagaatctattgcggacaagaacactactgcgatagtcatcataaatcccaataatccatgcgggaatgtgtacacttacgagcatttatccaaggttcagctggtttatttaaatttgataaaagtttaaataatattatgggcaacttattaatgtgcatatgtattattgttatttaggtggcagaggtagcaaggaagcttgggatattggtaattactgatgaggtgtatggtaatttggtttttgggagttccccatttgtcccaatgggttgctttgggcacatcgtaccaatattaaccataggatcgctatcaaagaggtggatagtgccgggatggcgacttggttgggtagcaatatgtgaccccaagaagactctacaagaaaccaaggtaaaatatatatttaatactgttttgatactttttttgtgaattgatatttgaaatatatatttttctaagtgtatactactttctttgtagattgcaacattaattactaatttccttaatgtttcaactgatccagcaactttcattcaggttagtgtttttttccttaacaagccaatgtttgggttataattttggtcatttatctgctttatgtaatgtttggtggactatgtgttgtggtcgctcttcggaaattggatggctgttcaaaatgcacagtgtggtgtctagcattgtttgtagctgagaaaaactactggtttaaaatatactatcgaatacttaccaaataaatagtacttatgaatcagagttataatcaaacataagttcatcaaagtaacaaaaaaagtttaattcagttttttatgttcatttcatcctatttctgttaaaacataataatatgttttaaaaattaattgagaagatgaggtttgtattttgtgttcactctgaggtgcgtagttatttaagtgataatgtgaagttcaatgttacgttaaagtaagcatacaattcttatactgagattatttattggtatcttgctttaaaaatattatattggcctcgtgtattcattttatctcaaataattgaattgtgcatgttttgttgttgaatttcttagggagctctaccgaatattcttaagaataccaaggaagaattctttaagaggataattgatttgcttacggaaacatcagatatttgctatagaggaataaaggatattaaatgcatcacttgtcctcacaagcccgaaggatccatgtttgtgatggtaagatttcctcttaaatcattttatcattagagctgtactagcatcaatttatcacactcaaaaaataattatgctatatttaatttagttggcacctaaaacacttaattcagagtcatgagaaatttttggtgtattgtgttgaagaataatgctataattaggaagttgtagtttgccatgttaacatcaattttcttttgttgctacaacatacttgtcacttaagcttcacttccagtaatcttacattgaaatcctataaacaggtgaaattgaacctatatcttttggagggaatccatgatgatgttgatttttgttgccaacttgcgaaagaagagtcggtgattctttgcccaggtacatctaacatttttgttaataaatggatatgtatgtgcctatttaattaaagaaagttaaaaatttaatattatattattcaattcacttgttatgttcttgtaattctctaacgctataccatgacatataagtgatgctaccttatttagtttctcacaaatctaatgattactttttggctaaacatttatgcttattaattaattttgttatgaaactttgaaaattattctatgattttgttgcttaaaaaaagttaatagttaattacttttagttttgcatctctaatcactaatagataatagtttagttagaatatttaaatatatgtggttatgagttttttattgattgcatgtaaactttttatatgtgatatatgaatatgacgacattattttatttctatatatgaaagaaaatttagcaaagtgatgcaatgatattcagacaggcacattatatccctacctgttgtttttgtcttatggatgaacaaatgaaagatcatctgctttttttataatatttgagaatacaaacggatattgactatctaaaagataaaagttgttttaaaatacaagaaacttatatgtagaaaacattttgcaaaaaccgcaccatccatgagcttggaaagtgtgcttgtaagaatccataatctgtaagaggaaaagaacagggccaatcacatgtaaataaaaattgcgtatgccttaattatatgagaaaatataattcaatgtccaacaatatttgggtacacgtactttgtccttttagtttatggatgttgattactttaagtactgaaggaaaaactaacaaagagatctaatattatgctaccactttaaatattagttaactctgtagtagtaaattaagctagagatttaatataatatcttaaataaagtaaatgttatagccttgttaatgtttctattttacgaataatgtatttatacatatactttacgtatcctaatttaactatgttgcctaaatgcagggagtgtgctgggaatgaagaattgggttcgcattacttttgctattgattcatcttctctcctggatggtcttgagaggatcaaatccttctgccaaaggcacaagaagaaaaaccctttaaattatatctagattgtactaggattggaatgatcagtactaattgtgatgtttgtgctttatacctgttgtcaccaaaatggaactattaatttgctatgaataaagcttacaaattcatatgtg</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001185987.1 RefSeq:Os02g0306401]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 2]]
| |
| − | [[Category:Chromosome 2]]
| |
