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| − | Please input one-sentence summary here.
| + | The rice '''Os01g0949400''' was reported as ''' se13''' in 2011 <ref name="ref1" /> by researchers from the Japan. |
| − | | + | <br> |
| | ==Annotated Information== | | ==Annotated Information== |
| | + | ===Gene Symbol=== |
| | + | *'''Os01g0949400 <=> se13''' |
| | + | <br> |
| | ===Function=== | | ===Function=== |
| − | Please input function information here.
| + | *The complete loss of photoperiodic responser of X61 is caused by a loss of function of the '''Se13''' (OsHY2) gene involved in phytochrome chromophore biosynthesis. |
| − | | + | <b> |
| − | ===Expression===
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| − | Please input expression information here.
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| − | | |
| − | ===Evolution===
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| − | Please input evolution information here.
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| − | You can also add sub-section(s) at will.
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| | ==Labs working on this gene== | | ==Labs working on this gene== |
| − | Please input related labs here.
| + | *Graduate School of Agriculture, Kyoto University, Kitashirakawa, Sakyou, Kyoto 606-8502, Japan |
| | + | *Faculty of Agriculture, Okayama University, |
| | + | <br> |
| | + | ==References== |
| | + | <references> |
| | + | <ref name="ref1"> |
| | + | Complete loss of photoperiodic response in the rice mutant line X61 is caused by deWciency of phytochrome chromophore biosynthesis gene |
| | + | </ref> |
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| − | ==References==
| + | </references> |
| − | Please input cited references here.
| + | <br> |
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| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]] |
| − | GeneName = Os01g0949400|
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| − | Description = Similar to Phytochromobilin synthase precursor|
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| − | Version = NM_001051934.1 GI:115442238 GeneID:4325761|
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| − | Length = 2690 bp|
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| − | Definition = Oryza sativa Japonica Group Os01g0949400, complete gene.|
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| − | Source = Oryza sativa Japonica Group
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| − | | |
| − | ORGANISM Oryza sativa Japonica Group
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| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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| − | clade; Ehrhartoideae; Oryzeae; Oryza.
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| − | |
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| − | Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
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| − | AP = Chromosome 1:43617245..43619934|
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| − | CDS = 43617374..43617562,43617660..43617710,43617853..43617956,43618122..43618254,43618340..43618433<br>,43618544..43618638,43619069..43619188,43619760..43619879|
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| − | GCID = <gbrowseImage1>
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| − | name=NC_008394:43617245..43619934
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| − | source=RiceChromosome01
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| − | preset=GeneLocation
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| − | </gbrowseImage1>|
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| − | GSID = <gbrowseImage2>
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| − | name=NC_008394:43617245..43619934
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| − | source=RiceChromosome01
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| − | preset=GeneLocation
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| − | </gbrowseImage2>|
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| − | CDNA = <cdnaseq>atgagcagcggcggcgtcggcggcgggagcttgggcgccggcttgctgtaccacaagttcgtcagcttcgcgctggaggagacccgactccggaccaccctcacccctcacccctcccaggaaaagttcaagtctataaaacccaatgatgataatacagttttcaatgctctctcattcagtgcaccgaaaattagattgcttcgcagcttgacaatcgagaagaaaaactcatatcaggttcttgactttgccgctttctctgaacctgaatacgatcttcctatattttgcgccaacgtttttacaactcatgcacaaagtattgttgtattggacctcaatcctctatatgatactacagtgcacaaggattacaaagataagtactataggagtataatgcctcttgtacacaagtataacgagcttcttccttggggtggcaagattacgagtgagtcattgaagttcttctctccaattgtgatctggacaatatttgagtcaactgaacacaaccaccatgttctacattcagctttcgtggattattataaggtctggcttgaattaatggaccaagcaattaaagaaaataacaaagcaacaattgctcgtaaccaagaagaacaacataaatatctcacatggagggctgagaaggatcctggctatccccttttgaagaagttaattggtgaaagtcgtgccgaggatctggtgatggagtttctgtttgaaggagtaaatactcttggaacaaaatcatttctggattatttccctgaatacgcccgtgatgatgggtcagtgaacaagaaaaggagtatgatcggcaagtcttttgaaactaggccttgggacgccaatggagaattcattggcgatgccgaagcacagtaa</cdnaseq>|
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| − | AA = <aaseq>MSSGGVGGGSLGAGLLYHKFVSFALEETRLRTTLTPHPSQEKFK SIKPNDDNTVFNALSFSAPKIRLLRSLTIEKKNSYQVLDFAAFSEPEYDLPIFCANVF TTHAQSIVVLDLNPLYDTTVHKDYKDKYYRSIMPLVHKYNELLPWGGKITSESLKFFS PIVIWTIFESTEHNHHVLHSAFVDYYKVWLELMDQAIKENNKATIARNQEEQHKYLTW RAEKDPGYPLLKKLIGESRAEDLVMEFLFEGVNTLGTKSFLDYFPEYARDDGSVNKKR SMIGKSFETRPWDANGEFIGDAEAQ</aaseq>|
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| − | DNA = <dnaseqindica>2373..2561#2225..2275#1979..2082#1681..1813#1502..1595#1297..1391#747..866#56..175#acttgccactgaagagtggctgcttgcaggcttggcttgcagctggggagagagcatgagcagcggcggcgtcggcggcgggagcttgggcgccggcttgctgtaccacaagttcgtcagcttcgcgctggaggagacccgactccggaccaccctcacccctcacccctcccaggttcttcttcttgttgttcttcctaccttagcatgctccttgcagcaaaacaaaatctagctcatgttcttgcaacctagtagagtctactgttagctacttggttcaaatactggtgaactactaggtgcccttggtttgatgatttttttttctgtctgaaaaacaaaattgtaatagttgtgagctagagctaccactacgaccatactgttgcgattggtcgttacctgatgattttttttttttgctattgtagaccagcactgggaaacctagctttcatatgtgaacaaattaatcccttgtaaacaatgacataacctaatcgttgtttctttagtcgcaaccaagtgattgtgattacttgtttaatcttgtgaagaagcaggctaccaagcatagacatttgattgtgcaatttatttatttatagtagtatctatcagagctatgtcgcccaatagtggcagctagcttcaaccatgtttctaagccctgtctcaggctgtcaatatttctgtctcatgtaaatgtaagtagttgaccttgtattgttttatgcttccaggaaaagttcaagtctataaaacccaatgatgataatacagttttcaatgctctctcattcagtgcaccgaaaattagattgcttcgcagcttgacaatcgagaagaaaaactcatatcaggtatttaatctatgttggggatttctgttcaagtttacttgatcaaaactctcttaacaataccacaagtccacaatgttgctttccctgacttatctcctattcccctgtgctttaaacattgtcctggttctgcttcattgtgatttggaacgtttatatccagtcatagttctacaacacgatccacgttaaatctttcgttgatctttcactgaaaaaaaaaatgtattgctttgatttgatcaatttatgactattctttttctacaatgcaacaaattaaaagtgttgacccgccagcttacgtcatgttttaccattctccatataacatgtgaagagttttgcttgctagttacaattgaatgccccatatctctatctaggaaaatgctccactatacttacaatgcatattcctatgcaggttcttgactttgccgctttctctgaacctgaatacgatcttcctatattttgcgccaacgtttttacaactcatgcacaaagtattgttgtattgtaagtgtcagagaatagttgctgttgcaaggaaaagtattgttggctttcttccttgcctaaaacctaatggatatgagccctgaacgaacaattcaaactatctgcagggacctcaatcctctatatgatactacagtgcacaaggattacaaagataagtactataggagtataatgcctcttgtacacaagtataacgaggtacatggatctttcctggctccacccaacctattgcctcataaattgttatttagctcgatatctttatttagaggatatgcagcttcttccttggggtggcaagattacgagtgagtcattgaagttcttctctccaattgtgatctggacaatatttgagtcaactgaacacaaccaccatgttctacattcagctttcgtggattattataaggcaagaccagactatttctttaaattttctcaaaaagtttaagagaaacacgaaatttgaacaagtttcctgcccttgttttgtcaatgtgaattttggactgaatttcttgaaggattattctcttgtgtgcagccatcaaatctgaatattctcactatgtaggtctggcttgaattaatggaccaagcaattaaagaaaataacaaagcaacaattgctcgtaaccaagaagaacaacataaatatctcacatggagggctgagaaggttgtttttttattccatcagaatcagatatcactttagaaaattatactcggagacttgagtattacttgcctcattctgctactcatccattggtgttatgaaagatactatgttgatcttgtgcatcctctatgtgcaggatcctggctatccccttttgaagaagttaattggtgaaagtcgtgccgaggttttgtctgggccatcactacatttatacttacttttgacttatattctgtgtggtgttatttgaattttgaggtatgtatcatcttgacaatcaggatctggtgatggagtttctgtttgaaggagtaaatactcttggaacaaaatcatttctggattatttccctgaatacgcccgtgatgatgggtcagtgaacaagaaaaggagtatgatcggcaagtcttttgaaactaggccttgggacgccaatggagaattcattggcgatgccgaagcacagtaaaatgttcgctacgcctttcggcctgatcaatctctcttatgcttgtagtactgttttctttttttttagaaaacttacatttttcatgctcatatccctgaacttggattgaataagaagagattggtg</dnaseqindica>|
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| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001051934.1 RefSeq:Os01g0949400]|
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| − | }}
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| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
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| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 1]]
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| − | [[Category:Chromosome 1]]
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