Difference between revisions of "Os01g0645400"

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(Created page with "{{JaponicaGene| GeneName = Os01g0645400| Description = Similar to Dimethylaniline monooxygenase-like protein (Flavin-containing monooxygenase YUCCA)| Version = NM_001185552...")
 
(Annotated Information)
 
(3 intermediate revisions by 3 users not shown)
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{{JaponicaGene|
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The rice '''Os01g0645400''' was reported as ''' OsYUCCA1''' in 2007 <ref name="ref1" /> by researchers from the China.
GeneName = Os01g0645400|
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<br>
Description = Similar to Dimethylaniline monooxygenase-like protein (Flavin-containing monooxygenase YUCCA)|
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==Annotated Information==
Version = NM_001185552.1 GI:297720238 GeneID:9269185|
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===Gene Symbol===
Length = 2169 bp|
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*'''Os01g0645400 <=> OsYUCCA1'''
Definition = Oryza sativa Japonica Group Os01g0645400, complete gene.|
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<br>
Source = Oryza sativa Japonica Group
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===Function===
 +
*The rice enzyme '''OsYUCCA1''' in IAA biosynthesis via the tryptophan-dependent pathway.
 +
<br>
 +
===Expression===
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*'''OsYUCCA1''' was expressed in almost all of the organs tested, but its expression was restricted to discrete areas, including the tips of leaves, roots, and vascular tissues, where it overlapped with expression of a b-glucuronidase reporter gene controlled by the auxin-responsive DR5 promoter.
 +
<br>
 +
===Mutant===
 +
*Plants overexpressing '''OsYUCCA1''' exhibited increased IAA levels and characteristic auxin overproduction phenotypes, whereas plants expressing antisense '''OsYUCCA1''' cDNA displayed defects that are similar to those of rice auxininsensitive mutants.
 +
<br>
  
  ORGANISM  Oryza sativa Japonica Group
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==Labs working on this gene==
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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*Bioscience and Biotechnology Center, Nagoya University Chikusa, Nagoya Aichi, 464–8601, Japan
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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<br>
            clade; Ehrhartoideae; Oryzeae; Oryza.
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==References==
|
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<references>
Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
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<ref name="ref1">
AP = Chromosome 1:27750515..27752683|
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Auxin Biosynthesis by the YUCCA Genes in Rice
CDS = 27752384..27752602|
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</ref>
GCID = <gbrowseImage1>
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name=NC_008394:27750515..27752683
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</references>
source=RiceChromosome01
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<br>
preset=GeneLocation
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==Structured Information==
</gbrowseImage1>|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]]
GSID = <gbrowseImage2>
 
name=NC_008394:27750515..27752683
 
source=RiceChromosome01
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>gatgccggtgacttgttcacgagggagggcatttccaaggtccccttccctaacagctggagagggcggaatggtctctacaccgtcggattcactcagcgggggctcctcggcacgtcatcggacgccctcaacgtcgccaaagacatacattgccaatggagagaaagggaccgatctgctattaatgtacttgaaataagcaactcttccttttga</cdnaseq>|
 
AA = <aaseq>DAGDLFTREGISKVPFPNSWRGRNGLYTVGFTQRGLLGTSSDAL                    NVAKDIHCQWRERDRSAINVLEISNSSF</aaseq>|
 
DNA = <dnaseqindica>1870..2088#acctagttggcagtaaaaaaagcgccgctacctacacacacaaccgctctgcacaaggggccatggacaacaagccggcgcaagaacgccgcgagacgtgggtcccgggcgccgtcatcgtcggcgcgggcccgtcggggctcgccgcggcggcgtgcctcgcggcgcggggcgttccggcgacggtgcttgagcggtccgactcgctggcgtccacgtggcgccaccgcatgtacgaccgcctcgctctccacctgcccaagcgcttctgcgagctgccgctcctcccgttcccggaggagtacccgacgtacccgtccaaggaccagttcgtggcgtacatggaggcgtacgccgcggcggcgggcgtcgcgccgcgcttcggcgccaccgtcgaggaggccgcgttcgacgcggccgtcggcgcatggagggtgcgtctcgacggcggggaggtgctcatggcgcggtggctcgtcgtcgcgacgggggagaacgccgagccgcgggtgccggactttcccggcatgcagaagttcgccgggtgtgccatgcatacttccgagtacaagtccggcgagcagtttgccggtaagaaggtgttggtcgtgggatgcgggaattctggcatggaagtgagcttggatttgtgccggcatggcgcgaagccctccatggtggtgcgcaacacggtaagaaactagttaaactgagcttatgctttagaacctatctatcatgctctgtttttcccctgttttttttgtctgtatttgatttatctttctgtgtgtcacatcttattgtcattggacatattattgtcatcttaaatccgttttcattgtgcatggctgtattggatcatattcaggaaggagaaattagacctgttaacatcttccattccacacaactttatatgtcgggtgtcttgtcctatcaacagccgtttctttcttccattttgcctccccctgccctccgataattacgcgtgtcattttcattacattattatgatgacgggttacacaaatctaagcgccgtggtgatgtttcgtccaggtgcatgtcctaccaagggaaatgttcggtctatccacgttcggcatcgccatggcgctgctgcgatggctaccggttcagctcgtcgaccggttccttctcacggcggctcacctcatcctcggtaacacggggcagttcggcctaaggcggcccaaaacagggcccatcgagctcaagaacctcaccggcaggacacccgtactggacgttgggacgctagaccacatcaaatccggcaaaattaaggttagtgccaaccattcagctagcctagctcctttcaagaaccagtagtagaaactgagaccagtcaaactgtcgagctgtacatgtgagctgctgggcgtctacttcctaatgtggcacatcagctattcgcacatgcagcatgtacatttctcttgtggaaaatggttctcatatggagattcatttattttatccctgtgggttttctcctgtgctttgattgatgaggcgctgatgggaatcatgcatcactaggtagtgggagcagtgaaggagatgacgaggcaaggggtcaggttcacggatggcaaggaggagcaattcgacacaataatcctcgccacaggctacaggagcaacgtgccatcttggctcaaggtaaagcagagtgtgactcactcttgttcgttttatttttctttctgtccgcactgcactatactactactagtgatatatatctcgagatgatacggattatatggtcaactgtcaagcccaaggatgttaattatatgtctatatgtacgtgtgctttatgtgttgtaggatgccggtgacttgttcacgagggagggcatttccaaggtccccttccctaacagctggagagggcggaatggtctctacaccgtcggattcactcagcgggggctcctcggcacgtcatcggacgccctcaacgtcgccaaagacatacattgccaatggagagaaagggaccgatctgctattaatgtacttgaaataagcaactcttccttttgatttgactggaaatgtacagtgttttgattaggaatattgtattgtgtgcatataacaccatgttctatctcccttttcaac</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001185552.1 RefSeq:Os01g0645400]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 1]]
 
[[Category:Chromosome 1]]
 

Latest revision as of 04:26, 14 December 2016

The rice Os01g0645400 was reported as OsYUCCA1 in 2007 [1] by researchers from the China.

Annotated Information

Gene Symbol

  • Os01g0645400 <=> OsYUCCA1


Function

  • The rice enzyme OsYUCCA1 in IAA biosynthesis via the tryptophan-dependent pathway.


Expression

  • OsYUCCA1 was expressed in almost all of the organs tested, but its expression was restricted to discrete areas, including the tips of leaves, roots, and vascular tissues, where it overlapped with expression of a b-glucuronidase reporter gene controlled by the auxin-responsive DR5 promoter.


Mutant

  • Plants overexpressing OsYUCCA1 exhibited increased IAA levels and characteristic auxin overproduction phenotypes, whereas plants expressing antisense OsYUCCA1 cDNA displayed defects that are similar to those of rice auxininsensitive mutants.


Labs working on this gene

  • Bioscience and Biotechnology Center, Nagoya University Chikusa, Nagoya Aichi, 464–8601, Japan


References

  1. Auxin Biosynthesis by the YUCCA Genes in Rice


Structured Information