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| − | Please input one-sentence summary here.
| + | The rice '''Os01g0872800''' was reported as ''' OsPdk1''' in 2010 <ref name="ref1" /> by researchers from the Japan. |
| − | | + | <br> |
| | ==Annotated Information== | | ==Annotated Information== |
| | + | ===Gene Symbol=== |
| | + | *'''Os01g0872800 <=> OsPdk1''' |
| | + | <br> |
| | ===Function=== | | ===Function=== |
| − | Please input function information here.
| + | *'''OsPdk1''' positively regulates basal disease resistance through the OsOxi1–OsPti1a phosphorylation cascade in rice. |
| − | | + | *The phosphorylation status of '''OsPdk1''' in response to chitin elicitor. Like OsOxi1, '''OsPdk1''' is rapidly phosphorylated in response to chitin elicitor, suggesting that '''OsPdk1''' participates in signal transduction through pathogen recognition. |
| − | ===Expression===
| + | <br> |
| − | Please input expression information here.
| + | ===Mutant=== |
| − | | + | *The overexpression of '''OsPdk1''' enhanced basal resistance against a blast fungus, Magnaporthe oryzae, and a bacterial pathogen, Xanthomonas oryzae pv. oryzae (Xoo). |
| − | ===Evolution=== | + | <br> |
| − | Please input evolution information here.
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| − | | |
| − | You can also add sub-section(s) at will.
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| | ==Labs working on this gene== | | ==Labs working on this gene== |
| − | Please input related labs here.
| + | *Division of Plant Sciences, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki, 305-8602 Japan |
| − | | + | *Division of Genome and Biodiversity Research, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki, 305-8602 Japan |
| | + | <br> |
| | ==References== | | ==References== |
| − | Please input cited references here.
| + | <references> |
| | + | <ref name="ref1"> |
| | + | Pdk1 Kinase Regulates Basal Disease Resistance Through the OsOxi1–OsPti1a Phosphorylation Cascade in Rice |
| | + | </ref> |
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| | + | </references> |
| | + | <br> |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]] |
| − | GeneName = Os01g0872800|
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| − | Description = Similar to 3-phosphoinositide-dependent protein kinase-1 (Fragment)|
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| − | Version = NM_001051483.1 GI:115441336 GeneID:4324953|
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| − | Length = 4097 bp|
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| − | Definition = Oryza sativa Japonica Group Os01g0872800, complete gene.|
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| − | Source = Oryza sativa Japonica Group
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| − | | |
| − | ORGANISM Oryza sativa Japonica Group
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| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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| − | clade; Ehrhartoideae; Oryzeae; Oryza.
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| − | |
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| − | Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
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| − | AP = Chromosome 1:39609260..39613356|
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| − | CDS = 39609595..39609687,39609764..39609986,39610135..39610301,39610379..39610513,39610813..39610978<br>,39611758..39611836,39611920..39612025,39612110..39612211,39612297..39612349<br>,39612476..39612656,39612762..39612953|
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| − | GCID = <gbrowseImage1>
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| − | name=NC_008394:39609260..39613356
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| − | source=RiceChromosome01
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| − | preset=GeneLocation
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| − | </gbrowseImage1>|
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| − | GSID = <gbrowseImage2>
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| − | name=NC_008394:39609260..39613356
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| − | source=RiceChromosome01
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| − | preset=GeneLocation
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| − | </gbrowseImage2>|
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| − | CDNA = <cdnaseq>atggcggtcggcggcgacgacgacatggagagggacttcgccgccaggctccgcctcgcgccctcccccgcctccccgaacgccgccgccggaggtggcggtggcgggatcgccttccgcgcgccgcaggagcagttcaccgtcggcgacttcgagcttggcaagatctacggcgtcggctcctactccaaggtggtgagggccaagaagaaggatacggggaatgtgtacgcgctcaagatcatggacaagaagttcatcaccaaggagaacaagatctcctacgtcaagatggagcgcatcgtgctcgatcagctggatcacccgggcgtcatcaggctcttcttcaccttccaggacacctactccctctatatggcgcttgagtcgtgtgaaggtggggagctgtttgaccaaattgttcggaaaggtcgcctgtctgaggatgaggcccggttttatgctgctgaaattgttgatattctggagtatttgcatagtttaggcctaattcatcgggatgttaagccagaaaatttactgcttacttctgatgggcacatcaagattgccgattttggtagtgtgaagcctacaaaggacaccccgatcaaagtccttccaaattccactaacgagagggcctgtacatttgttgggacagctgcatatgtaccacctgaggtcctgaactctgccccaccaacctttggaaatgacttatgggcattggggtgtactctatatcaattgctttctggctcttcaccatttaaagatgccagtgagtggttaattttccagagaattatagcacgcgatctcaaaattcctgagtacttctcagatgatgcaagggatctcattgacaagctgctggatgtcgacccaagcaaacgtccaggtgcaggacctgatggttatgtgtcattgaagaaacatcctttttttagaggcattgattggaaaaatataaggagcacacgggcaccgaagcttgcaatggaggcaaatgcaaatgaggatgaagatagtcaggattcaagttggttgtcacacatgggaagtgctccagtcaaccaacatgtcagtcctgttgggaatgatggtgcctcatcatcttctgaagtacgctcccatatatctagattagcttccatcgactccttcgactctagatggcaggacttcctggagcctggcgaatctgtcgttctaatatcaaaactgaagaagataaacaagctaacgaacaagaaggttcagttgatcctcaccgacaaaccacagctgatctgtgtagatcctggaaaaatggtgactaaagggaacatcatgtggtctgatgacccaagtgaactcaatgtgcaagtatcaaactcttcgcatttcaggatatgcacgccaaagaaggtgtcatcgtttgaggatgcaaaacagcgcgcctggcaatggaagaaggcgatcgaagacctacaacgctgccagaagaactga</cdnaseq>|
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| − | AA = <aaseq>MAVGGDDDMERDFAARLRLAPSPASPNAAAGGGGGGIAFRAPQE QFTVGDFELGKIYGVGSYSKVVRAKKKDTGNVYALKIMDKKFITKENKISYVKMERIV LDQLDHPGVIRLFFTFQDTYSLYMALESCEGGELFDQIVRKGRLSEDEARFYAAEIVD ILEYLHSLGLIHRDVKPENLLLTSDGHIKIADFGSVKPTKDTPIKVLPNSTNERACTF VGTAAYVPPEVLNSAPPTFGNDLWALGCTLYQLLSGSSPFKDASEWLIFQRIIARDLK IPEYFSDDARDLIDKLLDVDPSKRPGAGPDGYVSLKKHPFFRGIDWKNIRSTRAPKLA MEANANEDEDSQDSSWLSHMGSAPVNQHVSPVGNDGASSSSEVRSHISRLASIDSFDS RWQDFLEPGESVVLISKLKKINKLTNKKVQLILTDKPQLICVDPGKMVTKGNIMWSDD PSELNVQVSNSSHFRICTPKKVSSFEDAKQRAWQWKKAIEDLQRCQKN</aaseq>|
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| − | DNA = <dnaseqindica>3670..3762#3371..3593#3056..3222#2844..2978#2379..2544#1521..1599#1332..1437#1146..1247#1008..1060#701..881#404..595#gcctgtctgcctcctcccatcattcgatcactcctcctcctccctcctctctccctccctccgcgacccaacaaggaagacgacgaagaggaggagagagaagaggaggaggaggaggaaaagctctctctctctctctctctctctctctagattcgattcctttcgtccggcgcggccaacccgaaaggctgcggccgtcgcagtccaatcgattccccccctgcgctgcgctgcgctttcccacccctcgaagccgaatccgatggttcctccacccgttgaccgcctccgccatcggaggccgcgccgcgccctcgaaccccgcgccgcctgctgctgcctccgccgcctccgcctcctatagataccgccccggctcaccgcggcccggccctcccgaatggcggtcggcggcgacgacgacatggagagggacttcgccgccaggctccgcctcgcgccctcccccgcctccccgaacgccgccgccggaggtggcggtggcgggatcgccttccgcgcgccgcaggagcagttcaccgtcggcgacttcgagcttggcaagatctacggcgtcggctcctactccaaggtgttttgatttgattgatcggttcgcatgcgatgatgccccctgatcatccgcgttctcgtggttcttgtgcctggtggtgtcattcatggtggaatttggcaggtggtgagggccaagaagaaggatacggggaatgtgtacgcgctcaagatcatggacaagaagttcatcaccaaggagaacaagatctcctacgtcaagatggagcgcatcgtgctcgatcagctggatcacccgggcgtcatcaggctcttcttcaccttccaggacacctactccctctgttagtgccttccatttgagctgaaacactaacggcttcaaatattagctccaaaagattttatctccaaataaaagtgttggcattggatgaacaagacatttcttgctggttttttctgtgcagatatggcgcttgagtcgtgtgaaggtggggagctgtttgaccaaattgttcgggttggtgtcgtgctgctcacaatgccaacaatgcggataatttatcttgtatatttgcttcttatgcatggggttttgcttgcagaaaggtcgcctgtctgaggatgaggcccggttttatgctgctgaaattgttgatattctggagtatttgcatagtttaggcctaattcatcgggatgttaaggttcgcaaatcgtattggggttgcacattggcctgcagcagtaattatgggtggctgtaactcacactgctcttgatctttcagccagaaaatttactgcttacttctgatgggcacatcaagattgccgattttggtagtgtgaagcctacaaaggacaccccgatcaaagtccttccaaattccactagtaagataacatgtatatcaatgatttgtcttaaacgtcgcagtagttcgtaaaattctgattatcctaaatttactctacagacgagagggcctgtacatttgttgggacagctgcatatgtaccacctgaggtcctgaactctgccccaccaacctttgggtgagtgaataacttcgtctggaaagactaacgctttgataacctatcttcattgggagttatttcacttttcctttgtaacacttgaatgcttatttttttctctttcaattgatctcgtttttccattttgtacgagatgttatcttggactgtcaaagtatgagcactgtacttccattgactagacgcaccaaatattcatactgtagcactgtaccctgctttaaccaaatgaaccttcatacatgaaatgccgaagattcattaagacttgtcttgttaggaaacagaagtgtattagagttggctgccctggatgtgctaaatgtctctcatgctttgaccgaatagtaaaaaaattatgtctcatgctataacaagaaatatgttaagtcctaaaagaaactcaaagacttcaaaaaatgatatcagtcgcagaaggagtagatgtgacaacttgtgaactgcattttcctcctgctatcagaacaatagctatgcttttaaaaagtgaacttttcagaaaaaataatgcctaaggtaaatatggtgctccatttttcaaggtatggttacatcaccaatcagtttctgaaaagggagctggtttagccctaaggacatttattgctgaattgtggacttccaatcctaatttgctgtcagatgggtggttagcaagctttagagtgctgtgttttgtgttgatactgtatgagttattatgatatctttatacataatttctctgatgaacctttatctgttcttgacagaaatgacttatgggcattggggtgtactctatatcaattgctttctggctcttcaccatttaaagatgccagtgagtggttaattttccagagaattatagcacgcgatctcaaaattcctgagtacttctcagatgatgcaagggatctcattgacaagctgctggtatacattgcattcatttatccttgtacagccttttcatcagtagttcatttgtttttctaaagatgtataatgtttatctcacacaagtcacctttgtaccatttcatgaattattgtcactcttgctttcgcaatggcaaattcatagttgattgtttttactagttattatgcataataatttgttttgcttcctacgaaaattgcataggttataatctcaacttggacaactgcaagcgtgattttttcaacttgagaaccgcagttaatcctatgagttggctattgtgtaggatgtcgacccaagcaaacgtccaggtgcaggacctgatggttatgtgtcattgaagaaacatcctttttttagaggcattgattggaaaaatataaggagcacacgggcaccgaagcttgcaatggaggcaaatgtaatttcttgttacctttgtccattttatcacttcatacttccagcttccatccttctgacagtctctcgactcaggcaaatgaggatgaagatagtcaggattcaagttggttgtcacacatgggaagtgctccagtcaaccaacatgtcagtcctgttgggaatgatggtgcctcatcatcttctgaagtacgctcccatatatctagattagcttccatcgactccttcgactctagatggtaaacacagtttatcacaacattatattataacctacaggagagaaaagaaaattgaataaaagaggggaaatgaccggcatcatgctcaaatttttccacaagaggtgattcatgttggtgcatattgcttttaacaatgtgacaggcaggacttcctggagcctggcgaatctgtcgttctaatatcaaaactgaagaagataaacaagctaacgaacaagaaggttcagttgatcctcaccgacaaaccacagctgatctgtgtagatcctggaaaaatggtgactaaagggaacatcatgtggtctgatgacccaagtgaactcaatgtgcaagtatcaaactcttcgcatttcaggatatgcacggtattcttctttgttgttaccatcccttggtattatccttgctcctatgatgatgactaacgcagttcgtttacagccaaagaaggtgtcatcgtttgaggatgcaaaacagcgcgcctggcaatggaagaaggcgatcgaagacctacaacgctgccagaagaactgaccatgaccaactcaagacgtcaaaatggtgatattaagcattgtgtatacaccatagccatccttttcgcctggaggaacatgggggagactattgttcctggtctcctgcatctgtgcccgattgcaacgaagtctcaacagttggcacatcgatggatgttcctacatttttttgttttcttttccggccctgctaaattctcttatagcaaacaattttgctcgtttgttttgtaatttggtgcagcagatagcatcaggaattcaggatgattgaaaacgtttgcacttgaaacatttaacacaggaaactacatgagattgccagtttgt</dnaseqindica>|
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| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001051483.1 RefSeq:Os01g0872800]|
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| − | }}
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| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
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| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 1]]
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| − | [[Category:Chromosome 1]]
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