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| − | {{JaponicaGene|
| + | The rice '''Os01g0917500''' was reported as ''' msp1''' in 2003 <ref name="ref1" /> by researchers from the Japan. |
| − | GeneName = Os01g0917500|
| + | <br> |
| − | Description = Protein kinase-like domain containing protein|
| + | ==Annotated Information== |
| − | Version = NM_001051737.1 GI:115441844 GeneID:4324355|
| + | ===Gene Symbol=== |
| − | Length = 5453 bp|
| + | *'''Os01g0917500 <=> msp1''' |
| − | Definition = Oryza sativa Japonica Group Os01g0917500, complete gene.|
| + | <br> |
| − | Source = Oryza sativa Japonica Group
| + | ===Function=== |
| | + | *'''MSP1''' (MULTIPLE SPOROCYTE), which controls early sporogenic development, was elucidated by characterizing a retrotransposon-tagged mutation of rice. |
| | + | *'''MSP1''' product plays crucial roles in restricting the number of cells entering into male and female sporogenesis and in initiating anther wall formation in rice. |
| | + | <br> |
| | + | ===Expression=== |
| | + | *In situ expression of '''MSP1''' was detected in surrounding cells of male and female sporocytes and some flower tissues, but never in the sporocytes themselves. |
| | + | <br> |
| | | | |
| − | ORGANISM Oryza sativa Japonica Group
| + | ==Labs working on this gene== |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| + | *Experimental Farm/Plant Genetics Laboratory, National Institute of Genetics, Yata1111, Mishima, Shizuoka 411-8540, Japan |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| + | *Department of Molecular Genetics, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| + | *Department of Life Science, Graduate University for Advanced Studies, Yata1111, Mishima, Shizuoka 411-8540, Japan |
| − | |
| + | <br> |
| − | Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
| + | ==References== |
| − | AP = Chromosome 1:41774248..41779700|
| + | <references> |
| − | CDS = 41775540..41779424|
| + | <ref name="ref1"> |
| − | GCID = <gbrowseImage1>
| + | Characterization of a histidine- and alanine-rich protein showing |
| − | name=NC_008394:41774248..41779700
| + | |
| − | source=RiceChromosome01
| + | interaction with calreticulin in rice |
| − | preset=GeneLocation
| + | </ref> |
| − | </gbrowseImage1>| | + | |
| − | GSID = <gbrowseImage2>
| + | </references> |
| − | name=NC_008394:41774248..41779700
| + | <br> |
| − | source=RiceChromosome01
| + | ==Structured Information== |
| − | preset=GeneLocation
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]] |
| − | </gbrowseImage2>| | |
| − | CDNA = <cdnaseq>atggtatccaatagtttctggcttttcatcctgctagtgagcttcatccccatttctgcttgggcagaatcacgtgatataagtactctgttcactctgagggattcaatcaccgaaggaaaaggctttctccgtaactggtttgattcggaaactcccccatgcagctggtcaggcataacttgcataggacataatgttgtggcgattgatttgtcctctgttccactctatgctccgtttccattatgcattggggcattccagtcacttgttcggctcaacttcagtggatgtgggttttccggagagcttccggaagctttgggaaatttgcagaatctccagtacctagacttgagcaataacgagcttactgggccaatacctatctcactatataacctgaagatgctgaaggaaatggtgcttgactacaactccttgtcaggacaacttagtcctgctattgctcagctgcagcaccttactaagctatctatatccatgaattccatctccggaagccttccaccagatctgggcagcctgaagaacctggagttgttggacattaagatgaacacattcaatggatctataccagcaacttttgggaacctgtcttgtctcttgcactttgatgctagccagaataacctaactggatcaatattccctggaataacctcgttgacaaacctattgacacttgatctatcatcaaacagttttgagggaacaattcctagggagattggtcaactggaaaatctggaattactgattctaggaaagaatgatctcactggaaggattccacaagagattggtagtctgaagcagcttaagttacttcatctcgaggaatgtcagttcacaggcaaaataccttggtcaatcagtggactcagcagcttgacagaacttgacatatcagataacaactttgacgctgagctcccatcatccatgggtgagcttggcaatctaacacagctgattgcaaagaatgctgggctcagtgggaacatgccaaaagaacttgggaattgcaagaagcttactgttataaacctgtcattcaatgcccttattggacctattcctgaagaatttgcagatttagaggctattgtctcattttttgtggaaggaaataaactatcgggtcgtgtcccagattggattcagaaatggaaaaatgcaaggtccatcaggttgggacagaacaaattcagtggacctttgccagtgctgccattgcagcatctgctaagtttcgctgcagaatccaaccttctctcaggttctataccttctcacatatgccaagccaactccttgcattcactcttattgcatcataacaatctgactgggactattgatgaggcatttaaagggtgcacgaacctcactgaattgaacttgttagacaaccatattcatggggaggtaccaggatatttagcagaattacccctggttactctggagttgtcacaaaacaaattcgcagggatgttacctgcggagctgtgggagtcaaaaacccttctagagatatctctcagtaacaatgaaattaccggcccaatacctgagagtattggtaaactctctgtattgcaaaggttgcatatagacaataacttactcgaagggcctatccctcagtctgttggtgatctaaggaatctgaccaatctatccctgcgtggcaataggttatctgggatcattccactagcacttttcaactgcagaaaacttgccacgctggacttgagctataacaatctgactgggaacattccaagtgccatatctcacttgacattgcttgatagcttgattttgtcttccaaccagctgtctggttctatccctgctgagatttgcgtgggatttgagaatgaggctcaccctgactcagagtttcttcagcaccatggtcttcttgatctgtcatacaaccaattgactggtcagatcccaacatctataaagaactgtgcaatggtgatggtgctcaacctccaaggcaatttgctgaatggcaccattcctgtggagcttggcgagctaacaaatcttacatccattaacttgtcatttaatgaatttgttggaccaatgcttccatggtctggacctttggttcaattgcaaggccttattctgtccaataaccacctagatggctccattcctgctaagataggccaaatccttcccaaaattgcagtgctagacttgtcaagcaatgcactcactggcactctaccacagtctttgctctgcaacaattacctaaaccatctggatgtcagcaacaaccacctatctgggcatatccagttctcttgccccgatggcaaagaatactcaagtacactgctcttcttcaattcaagcagcaaccatttctcagggagcctagatgagtctatctcgaacttcacacaattgtctactcttgatatccacaacaatagcctcactggaaggttgccttcagcactttctgatctcagttctttgaattatcttgatctgtcgagcaacaatctctatggtgccataccctgtggaatctgcaatatatttggcctctcatttgccaacttctcaggtaactatattgacatgtacagcttggcagattgtgctgcaggaggcatttgttctactaatggtactgatcataaagcattgcatccatatcatcgggttcgaagggcaattaccatctgtgcctttacattcgtcatcatcattgttttagtgcttctggctgtttatctgagacggaagctggttagaagcaggcctttggcttttgaatctgccagtaaggccaaggctacagttgagcctacctcaactgatgaactgctaggaaagaagtcaagggaacctctgagtatcaatcttgcaacatttgagcatgcacttctgagggtcaccgcggatgatattctgaaagccacagaaaacttcagtaaggtgcacataataggtgatggtggatttggcactgtctacaaggcagcgctccctgaaggccggagagtcgcgatcaagaggctccatggtggccatcagttccaaggtgaccgtgagtttctagctgagatggagacaattggaaaggtgaaacatccaaacctcgtccctctacttggctactgtgtttgtggcgatgaacgattcctgatctacgagtacatggagaatgggagcctcgagatgtggctgagaaaccgagcagatgcacttgaagctcttggatggccggaccgtctcaagatctgcctcggttcagcccgtgggctcgccttcctgcatcatggctttgtgccccatatcatccaccgggacatgaagtcgagcaacattctactggatgagaacttcgagccgagggtctctgacttcggccttgcaaggatcatcagtgcctgtgagacccatgtcagcactgacattgccggtacatttggatacattcctccggagtatggcctcacaatgaagtccaccacgaaaggcgacgtctacagcttcggcgtcgtcatgctggagctcctcaccggacggccacctacaggccaggaggaggtgcaagggggtggaaacctcgtcggctgggtgcggtggatgatcgcccgcggtaagcagaacgagctgttcgatccatgcttgccggtttcaagcgtgtggcgggagcagatggcgcgcgtgctcgccatcgcccgggactgcaccgccgacgagccgttcaagaggccgacaatgctggaggtggtgaaggggctcaagatgacccacggcatggaatgtggacctctggtggtgaccgtctccagggacatgtaa</cdnaseq>|
| |
| − | AA = <aaseq>MVSNSFWLFILLVSFIPISAWAESRDISTLFTLRDSITEGKGFL RNWFDSETPPCSWSGITCIGHNVVAIDLSSVPLYAPFPLCIGAFQSLVRLNFSGCGFS GELPEALGNLQNLQYLDLSNNELTGPIPISLYNLKMLKEMVLDYNSLSGQLSPAIAQL QHLTKLSISMNSISGSLPPDLGSLKNLELLDIKMNTFNGSIPATFGNLSCLLHFDASQ NNLTGSIFPGITSLTNLLTLDLSSNSFEGTIPREIGQLENLELLILGKNDLTGRIPQE IGSLKQLKLLHLEECQFTGKIPWSISGLSSLTELDISDNNFDAELPSSMGELGNLTQL IAKNAGLSGNMPKELGNCKKLTVINLSFNALIGPIPEEFADLEAIVSFFVEGNKLSGR VPDWIQKWKNARSIRLGQNKFSGPLPVLPLQHLLSFAAESNLLSGSIPSHICQANSLH SLLLHHNNLTGTIDEAFKGCTNLTELNLLDNHIHGEVPGYLAELPLVTLELSQNKFAG MLPAELWESKTLLEISLSNNEITGPIPESIGKLSVLQRLHIDNNLLEGPIPQSVGDLR NLTNLSLRGNRLSGIIPLALFNCRKLATLDLSYNNLTGNIPSAISHLTLLDSLILSSN QLSGSIPAEICVGFENEAHPDSEFLQHHGLLDLSYNQLTGQIPTSIKNCAMVMVLNLQ GNLLNGTIPVELGELTNLTSINLSFNEFVGPMLPWSGPLVQLQGLILSNNHLDGSIPA KIGQILPKIAVLDLSSNALTGTLPQSLLCNNYLNHLDVSNNHLSGHIQFSCPDGKEYS STLLFFNSSSNHFSGSLDESISNFTQLSTLDIHNNSLTGRLPSALSDLSSLNYLDLSS NNLYGAIPCGICNIFGLSFANFSGNYIDMYSLADCAAGGICSTNGTDHKALHPYHRVR RAITICAFTFVIIIVLVLLAVYLRRKLVRSRPLAFESASKAKATVEPTSTDELLGKKS REPLSINLATFEHALLRVTADDILKATENFSKVHIIGDGGFGTVYKAALPEGRRVAIK RLHGGHQFQGDREFLAEMETIGKVKHPNLVPLLGYCVCGDERFLIYEYMENGSLEMWL RNRADALEALGWPDRLKICLGSARGLAFLHHGFVPHIIHRDMKSSNILLDENFEPRVS DFGLARIISACETHVSTDIAGTFGYIPPEYGLTMKSTTKGDVYSFGVVMLELLTGRPP TGQEEVQGGGNLVGWVRWMIARGKQNELFDPCLPVSSVWREQMARVLAIARDCTADEP FKRPTMLEVVKGLKMTHGMECGPLVVTVSRDM</aaseq>|
| |
| − | DNA = <dnaseqindica>1293..5177#tggatgtttcatgggcttcttgatcctatctccaggtttttaggctttacgatgagtggtttgcgtaacttctgcttttattcttgctgatcagagagcagttcctggtttttgttatgatggtgttgtttcttttgggggctaagaccaagataatagtattagtatatccttgtggagttgttggagctatagtggcaactgccaaacacagcccaaccagcattgcttcgagtccttccactagatgttgattcaagtaggataggtttgcttgtttcatgttcttgtacatttgagctgacaatcgcatgaaagctgagtgttcctgttcttttctaattgttcaggatgcatttctgagagggcgtaatggttcagactgcagaaggtaatgaaattgaagttcttcctttgtgctgaatgttcgtagagcttacagtagtgcacctggcatgaattacatgaatcttgcatttcctcttgctcatttgagagaagtggtatcaactctaacgaattctttgcgtcaaaaaaaaaaaactctaacgaattcatttcatgaaaaaaaagttctctactctttgattattttccatctgatctttgtataatgacatagcattaacctttttccaggatgtgtattgcacagttttatctgtcagtcatctatatcctacttgaagttacaaggctacatcttataaggtattcatatacaactacttactgtattctatggtaattgccttcttcttagagtagatgatactgttacagaattctcctgtgtattattggaaattaccgactgttcctgtcttctttccttgcccaacttcaacttggtagacagtttgtatctatagttcggccattacatgttcaagttttaaaaccaagagattcaaggtataaacataatttccctactactaaggaagtcactgttattgtgattgccattatgtctcattgttggtgctttggaggcatagacaagttttaaaaatctacgtttgtcaaatcttctaatctgttgcaggatataaagcagcaatttggccttgacatctatcctggcataaaacaaacaaaacctgattgccacttttgggtgaaattatctttagttctgcagagtagtaatgtatcatttgttgactaattacagtaaacgtaattgaataatttccagacttggtgatatgtggttcttttgcagctactgacatggttaacctcttcatgcagataattgttacagtcccaaaaagaataacgtggaaatggtatccaatagtttctggcttttcatcctgctagtgagcttcatccccatttctgcttgggcagaatcacgtgatataagtactctgttcactctgagggattcaatcaccgaaggaaaaggctttctccgtaactggtttgattcggaaactcccccatgcagctggtcaggcataacttgcataggacataatgttgtggcgattgatttgtcctctgttccactctatgctccgtttccattatgcattggggcattccagtcacttgttcggctcaacttcagtggatgtgggttttccggagagcttccggaagctttgggaaatttgcagaatctccagtacctagacttgagcaataacgagcttactgggccaatacctatctcactatataacctgaagatgctgaaggaaatggtgcttgactacaactccttgtcaggacaacttagtcctgctattgctcagctgcagcaccttactaagctatctatatccatgaattccatctccggaagccttccaccagatctgggcagcctgaagaacctggagttgttggacattaagatgaacacattcaatggatctataccagcaacttttgggaacctgtcttgtctcttgcactttgatgctagccagaataacctaactggatcaatattccctggaataacctcgttgacaaacctattgacacttgatctatcatcaaacagttttgagggaacaattcctagggagattggtcaactggaaaatctggaattactgattctaggaaagaatgatctcactggaaggattccacaagagattggtagtctgaagcagcttaagttacttcatctcgaggaatgtcagttcacaggcaaaataccttggtcaatcagtggactcagcagcttgacagaacttgacatatcagataacaactttgacgctgagctcccatcatccatgggtgagcttggcaatctaacacagctgattgcaaagaatgctgggctcagtgggaacatgccaaaagaacttgggaattgcaagaagcttactgttataaacctgtcattcaatgcccttattggacctattcctgaagaatttgcagatttagaggctattgtctcattttttgtggaaggaaataaactatcgggtcgtgtcccagattggattcagaaatggaaaaatgcaaggtccatcaggttgggacagaacaaattcagtggacctttgccagtgctgccattgcagcatctgctaagtttcgctgcagaatccaaccttctctcaggttctataccttctcacatatgccaagccaactccttgcattcactcttattgcatcataacaatctgactgggactattgatgaggcatttaaagggtgcacgaacctcactgaattgaacttgttagacaaccatattcatggggaggtaccaggatatttagcagaattacccctggttactctggagttgtcacaaaacaaattcgcagggatgttacctgcggagctgtgggagtcaaaaacccttctagagatatctctcagtaacaatgaaattaccggcccaatacctgagagtattggtaaactctctgtattgcaaaggttgcatatagacaataacttactcgaagggcctatccctcagtctgttggtgatctaaggaatctgaccaatctatccctgcgtggcaataggttatctgggatcattccactagcacttttcaactgcagaaaacttgccacgctggacttgagctataacaatctgactgggaacattccaagtgccatatctcacttgacattgcttgatagcttgattttgtcttccaaccagctgtctggttctatccctgctgagatttgcgtgggatttgagaatgaggctcaccctgactcagagtttcttcagcaccatggtcttcttgatctgtcatacaaccaattgactggtcagatcccaacatctataaagaactgtgcaatggtgatggtgctcaacctccaaggcaatttgctgaatggcaccattcctgtggagcttggcgagctaacaaatcttacatccattaacttgtcatttaatgaatttgttggaccaatgcttccatggtctggacctttggttcaattgcaaggccttattctgtccaataaccacctagatggctccattcctgctaagataggccaaatccttcccaaaattgcagtgctagacttgtcaagcaatgcactcactggcactctaccacagtctttgctctgcaacaattacctaaaccatctggatgtcagcaacaaccacctatctgggcatatccagttctcttgccccgatggcaaagaatactcaagtacactgctcttcttcaattcaagcagcaaccatttctcagggagcctagatgagtctatctcgaacttcacacaattgtctactcttgatatccacaacaatagcctcactggaaggttgccttcagcactttctgatctcagttctttgaattatcttgatctgtcgagcaacaatctctatggtgccataccctgtggaatctgcaatatatttggcctctcatttgccaacttctcaggtaactatattgacatgtacagcttggcagattgtgctgcaggaggcatttgttctactaatggtactgatcataaagcattgcatccatatcatcgggttcgaagggcaattaccatctgtgcctttacattcgtcatcatcattgttttagtgcttctggctgtttatctgagacggaagctggttagaagcaggcctttggcttttgaatctgccagtaaggccaaggctacagttgagcctacctcaactgatgaactgctaggaaagaagtcaagggaacctctgagtatcaatcttgcaacatttgagcatgcacttctgagggtcaccgcggatgatattctgaaagccacagaaaacttcagtaaggtgcacataataggtgatggtggatttggcactgtctacaaggcagcgctccctgaaggccggagagtcgcgatcaagaggctccatggtggccatcagttccaaggtgaccgtgagtttctagctgagatggagacaattggaaaggtgaaacatccaaacctcgtccctctacttggctactgtgtttgtggcgatgaacgattcctgatctacgagtacatggagaatgggagcctcgagatgtggctgagaaaccgagcagatgcacttgaagctcttggatggccggaccgtctcaagatctgcctcggttcagcccgtgggctcgccttcctgcatcatggctttgtgccccatatcatccaccgggacatgaagtcgagcaacattctactggatgagaacttcgagccgagggtctctgacttcggccttgcaaggatcatcagtgcctgtgagacccatgtcagcactgacattgccggtacatttggatacattcctccggagtatggcctcacaatgaagtccaccacgaaaggcgacgtctacagcttcggcgtcgtcatgctggagctcctcaccggacggccacctacaggccaggaggaggtgcaagggggtggaaacctcgtcggctgggtgcggtggatgatcgcccgcggtaagcagaacgagctgttcgatccatgcttgccggtttcaagcgtgtggcgggagcagatggcgcgcgtgctcgccatcgcccgggactgcaccgccgacgagccgttcaagaggccgacaatgctggaggtggtgaaggggctcaagatgacccacggcatggaatgtggacctctggtggtgaccgtctccagggacatgtaatgctctctgcttgatcttcctgaaactaatgtagtaataatgtagtcagtagggagtaggctaatggtagttaggagtaactcgtagctatagagtaaccgagctatctggaggctgtaatgagggaaactagagttactcatgttcaggctgtagttggaactagtattaagaccttttatcttgtactattgtcactggtggttcctgtggcaatgtgagtgcttaatgtgctgtcgtttgaataaaagtactgcttgcctgtttctaagtgtt</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001051737.1 RefSeq:Os01g0917500]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]]
| |
| − | [[Category:Japonica Chromosome 1]] | |
| − | [[Category:Chromosome 1]]
| |
