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| − | {{JaponicaGene|
| + | The rice gene Os12g0547500 was reported as '''''OsKCH1''''' in 2010<ref name="ref1" /> by researchers from Germany. |
| − | GeneName = Os12g0547500|
| |
| − | Description = Calponin-like actin-binding domain containing protein|
| |
| − | Version = NM_001073499.1 GI:115488959 GeneID:4352456|
| |
| − | Length = 6612 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os12g0547500, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| | | | |
| − | ORGANISM Oryza sativa Japonica Group
| + | ==Annotated Information== |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| + | ===Gene Symbol=== |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| + | *'''''Os12g0547500 <=> OsKCH1, O12 |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| + | |
| − | |
| + | ===Function=== |
| − | Chromosome = [[:category:Japonica Chromosome 12|Chromosome 12]]|
| + | * Plant kinesins with the calponin-homology domain (KCH) were recently identified and associated with a putative role in microtubule-microfilament cross-linking. '''''OsKCH1''''' is a member of the KCH in rice. |
| − | AP = Chromosome 12:22330365..22336976|
| + | ===Mutation=== |
| − | CDS = 22330560..22330656,22331352..22331518,22331615..22331758,22332192..22332449,22332531..22332602<br>,22332695..22332760,22333148..22333282,22333372..22333453,22333538..22333633<br>,22333743..22333919,22334022..22334128,22334217..22334392,22334515..22334676<br>,22334759..22335012,22335094..22335257,22335359..22335517,22335985..22336397<br>,22336485..22336620|
| + | * '''''kch1''''' insertion mutants show impaired cell expansion and increased division |
| − | GCID = <gbrowseImage1>
| + | |
| − | name=NC_008405:22330365..22336976
| + | * ''''KCH''''' overexpression delays nuclear positioning and mitosis in BY-2 cells. |
| − | source=RiceChromosome12
| + | ===Expression === |
| − | preset=GeneLocation
| + | * '''''OsKCH1''''' is expressed in a development and tissue-specific manner in rice |
| − | </gbrowseImage1>|
| + | |
| − | GSID = <gbrowseImage2>
| + | ===Evolution=== |
| − | name=NC_008405:22330365..22336976
| + | |
| − | source=RiceChromosome12
| + | You can also add sub-section(s) at will. |
| − | preset=GeneLocation
| + | ==Labs working on this gene== |
| − | </gbrowseImage2>| | + | * Institute of Botany 1 and Center for Functional Nanostructures (CFN), Karlsruhe Institute of Technology (KIT), Kaiserstrasse 2, D-76131 Karlsruhe, Germany |
| − | CDNA = <cdnaseq>atgatggccgcggcggtcgaggaggaggagatggtggagaggatgcacgggtgggcgagggacatggacgtggcgtcacgcagggccgaggaggaagcaatgagacggtatgatgcggcaagttggttgcgaagcacggttggggtagtgtgtgcaagagacctgccagatgaaccgtctgaggaggaattccggcttgggctgagaaatgggattgttctttgcaatgcactgaataagatccagcctggtgccatacctaaggttgtacaagcccagtcagatgctgctggccccacggatggctcagctctgtgtgcatatcagtactttgagaatctgcggaacttccttgttgttgtagaagatttaaggcttcctacatttgaggtgtccgatttagaaaagggtggcaaaggtgttcgggttgtggattgtgttcttgctttgaagtcattcagtgaaagtaataaaacagggagacaagcttcgtgtaaatatggcggcctttcaaaacctttgacagccagaaagtattttatactcaagaatactgatgcttttatgaataagataatgaaagggcactcagcagaggcaatccagagtgaattttcagaggggcaaagcatagttactgatttttctatagagtctaatgagatgactacttcagactcccttagcattcttttgcgtaaagttctcttagataagaaaccagaggaagtcccattgattgttgagtcgatcctaagcaaagttattcaggaatatgagcatcgaattgcaatccagaacaagatggatgaggaggagcaaaatctcttgaatatcacggaacaggtcaaccatgtagttgtaaatggtgatggtgaagttaaacagttccaactagaggcacagacaaattttgatgtgcaacaaaaacagatccaggaattgaagggtgctctttcttttgtcaagtctggcatggaacaactgagattacagtactctgaagaatttgctaaacttgggaaacatttctacactctctccaatgcggcttccagctaccataaagttcttgaggaaaaccgcaaattatacaaccaaatacaggaccttaaaggaaatattagagtatactgtcgagtgaggcctttcctacctggacatagaagtttatcaagcagtgttgctgacacggaagaaagaacaatcacaataatcactcccacaaaatatgggaaagatgggtgcaaatcattcagttttaacagggtctttggtccagcatctactcaagaagaggtcttttcagacatgcagcctttgatccgttcagtccttgatggtttcaatgtctgcatatttgcatatggccaaactggatcaggaaagacttttaccatgagtggaccgaaagttttgacagaggaaagcctcggtgttaactatagagcactaaatgacttatttaatattaaagcacagagaaaggggacaatcgattatgaaatttctgtgcagatgattgagatctacaatgagcaagtgagggatctccttcaggatggtggaaacaggagattagaaataagaaatactccacagaaagggcttgctgttccggatgcaagcatagttcctgtcacatctacggccgatgttgttgaattgatgaatcaaggccagaagaatcgtgcagtgggttcaacagccatcaacgatcgaagtagccgctctcatagctgcttgtctgttcatgtccaaggaaaatatttaacatctggggcaatgttgagaggttgcatgcatcttgtggatctagctggtagtgaaagagttgataagtctgaggttgtaggagacaggctgaaggaagcacagtacataaacaagtcactttcagcattaggagatgtgattgcatctcttgcacagaaaaattcgcatgtcccttaccgaaacagcaagcttacccagcttttgcaagattctctaggaggacaagcaaaaacgctgatgtttgttcacgtaagcccggaactagatgctgtcggtgagacaataagcacattgaaatttgctgaaagggttgcttcagttgagcttggtgcagcaaaagcaaacaaagaaggcagtgaggttagagagctcaaagaacagattgctaccctcaaggcggcattggctaaaaaggaaggagaaccagaaaacattcaaagcacacagtcaagccctgacatgtatagaattaaaagaggcaatgcaatacctgccttccctaaaaatagacagccaatggaagaagttggaaacttagaggtccggaacaatgccactccaatgcaaaagaaggccagctttcaattttctggtgtcctcagtgagaacaactcatccgacttggctgaaaattgcaatggcattcagaagaccgatagaatggctgtcggtaataatcaatttgagaatggaaattccattctagagctggagcctggcgcaactcagcttccaacatttttctaccaaagatatgatcccgacaagcaaaggcgtagggctgaaccagtagaaactgatgactcagatagctttgatgctgctactagctcgccttccgaccaagaaatgttgttgtccaccagtggcctcaaagctgatggtattgccagcagaggtgcctttattataaagaaacctcaaacaaagaatacgaaaattacagcaacgaagattccaaatcttgcaatgaagtcgccaatgtcagagaaaaggctgcaaaccccaatcaggaacagcaagcagctacctttcagcactacgggtggaagaagaactcgaaatggcaaaattaacactccaaaataa</cdnaseq>|
| + | ==References== |
| − | AA = <aaseq>MMAAAVEEEEMVERMHGWARDMDVASRRAEEEAMRRYDAASWLR STVGVVCARDLPDEPSEEEFRLGLRNGIVLCNALNKIQPGAIPKVVQAQSDAAGPTDG SALCAYQYFENLRNFLVVVEDLRLPTFEVSDLEKGGKGVRVVDCVLALKSFSESNKTG RQASCKYGGLSKPLTARKYFILKNTDAFMNKIMKGHSAEAIQSEFSEGQSIVTDFSIE SNEMTTSDSLSILLRKVLLDKKPEEVPLIVESILSKVIQEYEHRIAIQNKMDEEEQNL LNITEQVNHVVVNGDGEVKQFQLEAQTNFDVQQKQIQELKGALSFVKSGMEQLRLQYS EEFAKLGKHFYTLSNAASSYHKVLEENRKLYNQIQDLKGNIRVYCRVRPFLPGHRSLS SSVADTEERTITIITPTKYGKDGCKSFSFNRVFGPASTQEEVFSDMQPLIRSVLDGFN VCIFAYGQTGSGKTFTMSGPKVLTEESLGVNYRALNDLFNIKAQRKGTIDYEISVQMI EIYNEQVRDLLQDGGNRRLEIRNTPQKGLAVPDASIVPVTSTADVVELMNQGQKNRAV GSTAINDRSSRSHSCLSVHVQGKYLTSGAMLRGCMHLVDLAGSERVDKSEVVGDRLKE AQYINKSLSALGDVIASLAQKNSHVPYRNSKLTQLLQDSLGGQAKTLMFVHVSPELDA VGETISTLKFAERVASVELGAAKANKEGSEVRELKEQIATLKAALAKKEGEPENIQST QSSPDMYRIKRGNAIPAFPKNRQPMEEVGNLEVRNNATPMQKKASFQFSGVLSENNSS DLAENCNGIQKTDRMAVGNNQFENGNSILELEPGATQLPTFFYQRYDPDKQRRRAEPV ETDDSDSFDAATSSPSDQEMLLSTSGLKADGIASRGAFIIKKPQTKNTKITATKIPNL AMKSPMSEKRLQTPIRNSKQLPFSTTGGRRTRNGKINTPK</aaseq>|
| + | <references> |
| − | DNA = <dnaseqindica>196..292#988..1154#1251..1394#1828..2085#2167..2238#2331..2396#2784..2918#3008..3089#3174..3269#3379..3555#3658..3764#3853..4028#4151..4312#4395..4648#4730..4893#4995..5153#5621..6033#6121..6256#attcgaaaaccaagacccccctcctccccatcaaaacccagccacaatcacccggttccaccccccgatccagccctcctcgccgcgatccactctcccgggcgtcttctcctcgctcccacgatcccgccggtggatcgggccgccgtgattggtgccggttcgaggcgccgtgattggtgccggttcgaggcgatgatggccgcggcggtcgaggaggaggagatggtggagaggatgcacgggtgggcgagggacatggacgtggcgtcacgcagggccgaggaggaaggtgggttctctctctcgggcggcatttcgtagaacactctgggtgtgtgtgtgggtgggtgatttcttgatttgtttgctctgctgttcttggttgacccgtttcgggtttcagcttcattttttgggttttttatggtttagatggttgatcgaactggggagaatctcgtattgggggctctgatggttttgattttgacgtttcaacttttttttggtcagattcagtttagtatcgattcggctttttcaaattttgttggtgcgattcgggttgatgatttagttgggtggtggtgattaaaggtttcatttaatagcctcgcttgaaattgagctagtgttgagctcacagttgtgtcggtttcacgagatctttgtgtggggagaagggtttatgctttatgcctttcttggttcagactaagaagtggtagctgtaccatactggtataccttgatgtgtccagataatagtagcactatgaaaattagtatacattgatgtgtccagattataatgccactgaaaattatgtagtgatgtaatgaattatgaatcgtgttatcataattttgtggtaagcaaaaatgttgggcatgtttaggacacttcttagcagagatttttagcagtatttacagtacatctagtcagtgtgagatgatggtttactgggttgacaattgcagcaatgagacggtatgatgcggcaagttggttgcgaagcacggttggggtagtgtgtgcaagagacctgccagatgaaccgtctgaggaggaattccggcttgggctgagaaatgggattgttctttgcaatgcactgaataagatccagcctggtgccatacctaaggttgcatttttcgcattcaaattttatagattattcagaagccacaaatgctaatatgtgatgacatttctcttggcaatcttaaaatgtttccaggttgtacaagcccagtcagatgctgctggccccacggatggctcagctctgtgtgcatatcagtactttgagaatctgcggaacttccttgttgttgtagaagatttaaggcttcctacatttgaggtgtccgatttagaaaaggtaactctgtcatgctgatttggagagttcatgtcacaagccactttttcatcctagaggttcaattttctttagacaggcttcccggcttacctcatcatttgcaatactgcctttggtcacaaatatttgttgtttagaacaagtgtctggtcaaactttttaaatcaatttcttaaatatttagattggacacaattaaattatacagattttttctcaaaaagtaatttcataacattttaattttaatgggttttaaagatatttgacaatacaaattagtggtaaaatttacatttggaagattacgtcgctgtccaaaatgacatgtatctatgactagagggagaaatcttgaaatgaatgttgcatcactaatatatgagtcacttgagaaactgatgtattttatctgccaattcgaatgtagggtggcaaaggtgttcgggttgtggattgtgttcttgctttgaagtcattcagtgaaagtaataaaacagggagacaagcttcgtgtaaatatggcggcctttcaaaacctttgacagccagaaagtattttatactcaagaatactgatgcttttatgaataagataatgaaagggcactcagcagaggcaatccagagtgaattttcagaggggcaaagcatagttactgatttttctatagagtctaatgagatggtaagaactataatttggtatggtttttttgggcacaatcatgcttatacttcttaatgacctttaccttcttgtttgcagactacttcagactcccttagcattcttttgcgtaaagttctcttagataagaaaccagaggaagtcccattggtaagcctattttgcttgaagcataattgattattatgtgttgtgattgatgaacattgagaatataacaaaatactctctaatttggtcagattgttgagtcgatcctaagcaaagttattcaggaatatgagcatcgaattgcaatccagaacaaggtgtgttccgttccactataattatgataatgtttctttttttgctatttagaaaatcaggtttctccaaattacttgggttccgaagttagtaataagacttgatggtttggtgtttttgttgacctttatggttaggacatacaaactttaatttgggtaagaaaaacatctcaggttaaattcataggagattgtgtaggttctgtgtcatgttccagattatatacaccatcagaagctgaaaatgcttctagttgtgaccagatgagggtatattatttatttgagtaaatttcacatcatttattctaaatctgtggttgctacactctactcaattttttggtactttaataactgatgtttgttatggtgtatatgaagatggatgaggaggagcaaaatctcttgaatatcacggaacaggtcaaccatgtagttgtaaatggtgatggtgaagttaaacagttccaactagaggcacagacaaattttgatgtgcaacaaaaacagatccaggtattacttttgtgttccctattctttgtttgatcttttataacctggattcccatgaatattatttctaacagtttatactaccataggaattgaagggtgctctttcttttgtcaagtctggcatggaacaactgagattacagtactctgaagaatttgctaaacttggtaatatacagttctatttgcgttcatcttttttgtcatcacagaagtatttaatatatccatttttttaccatgttgtaaaagggaaacatttctacactctctccaatgcggcttccagctaccataaagttcttgaggaaaaccgcaaattatacaaccaaatacaggaccttaaaggtataattttgaatgttgaaggaacagatgcctgttatctatggtattttataaatttgaatttcttttcttttttttgaaactcaatttgaatttcttttctcgctaggaaatattagagtatactgtcgagtgaggcctttcctacctggacatagaagtttatcaagcagtgttgctgacacggaagaaagaacaatcacaataatcactcccacaaaatatgggaaagatgggtgcaaatcattcagttttaacagggtctttggtccagcatctactcaaggttaaacttataagttgctctggatttcccttttttttctcaaactgctttgatttgtatggaccactgaactttgcttcttttttttttttgttaatgcagaagaggtcttttcagacatgcagcctttgatccgttcagtccttgatggtttcaatgtctgcatatttgcatatggccaaactggatcaggaaagacttttaccatggtaatgaactgtactaaaaaaatattatttccatatgtcttgataaccttttcaaaattgttcaaaccactttatgaattttgtgcagagtggaccgaaagttttgacagaggaaagcctcggtgttaactatagagcactaaatgacttatttaatattaaagcacagagaaaggggacaatcgattatgaaatttctgtgcagatgattgagatctacaatgagcaagtgagggatctccttcaggatggtggaaacaggagatatccttttccattgaattgtgtttttctttaccagtaaaacgtcttctttttttctgttgttctcttttttatcttagttactatgaagcatatcttgtatctccttaacattaatctacattagaaataagaaatactccacagaaagggcttgctgttccggatgcaagcatagttcctgtcacatctacggccgatgttgttgaattgatgaatcaaggccagaagaatcgtgcagtgggttcaacagccatcaacgatcgaagtagccgctctcataggtatgcaattgtttcatactgagaacgtccagaaaacttcatatttgagctctgtacttatggctgaggaatctacatgcagctgcttgtctgttcatgtccaaggaaaatatttaacatctggggcaatgttgagaggttgcatgcatcttgtggatctagctggtagtgaaagagttgataagtctgaggttgtaggagacaggctgaaggaagcacagtacataaacaagtcactttcagcattaggagatgtgattgcatctcttgcacagaaaaattcgcatgtcccttaccgaaacagcaagcttacccagcttttgcaagattctctaggtactatctgaagttaatatgctaacttttcactcaattactacatatattcatagggtaactattttattccaatgtcaggaggacaagcaaaaacgctgatgtttgttcacgtaagcccggaactagatgctgtcggtgagacaataagcacattgaaatttgctgaaagggttgcttcagttgagcttggtgcagcaaaagcaaacaaagaaggcagtgaggttagagagctcaaagaacaggtgttcacttaactcctgattgctcatttatataaactatctagatgtggtacttctgtttagatttatataatcatcgtttttctctgctcttgtttcagattgctaccctcaaggcggcattggctaaaaaggaaggagaaccagaaaacattcaaagcacacagtcaagccctgacatgtatagaattaaaagaggcaatgcaatacctgccttccctaaaaatagacagccaatggaagaagttggaaacttagaggtattaactgctctttcacacaagatcaactctttttcttggaaatcacaaaaatatttccttttcacattgaagtttttttgtgagtgctagttatgattccaatcaatgtcaaataggaaaataacctaccaaacattctaaatggagatgggctatttatgcatttgtacataagtttagagtcattttgtcaataatctgaacaactctaaaactgaccaaagggtagttcatggtcttattgagagtacttatgtttaccttcagtagatttatgcatttgtacatcaagttcagaatcattttgtgaatgatctggacaacactaaaactgacgaaagcgtagttcatggtcttgttgagagtacttatgttaccttcagtagattattattccttttaatcttttcacaagaaaggtaatgatgttcatttaatgaatattatatttctttatgtaaaaggtccggaacaatgccactccaatgcaaaagaaggccagctttcaattttctggtgtcctcagtgagaacaactcatccgacttggctgaaaattgcaatggcattcagaagaccgatagaatggctgtcggtaataatcaatttgagaatggaaattccattctagagctggagcctggcgcaactcagcttccaacatttttctaccaaagatatgatcccgacaagcaaaggcgtagggctgaaccagtagaaactgatgactcagatagctttgatgctgctactagctcgccttccgaccaagaaatgttgttgtccaccagtggcctcaaagctgatggtattgccagcagaggtgcctttattataaagaaacctcaaacaaagaatacgaaaattacagcaacgaagtaagtccaatttaaatcctgtattttccatgaaaattgtgtgcattggattgctttaacctgttgtgctgctttgaatttactcaggattccaaatcttgcaatgaagtcgccaatgtcagagaaaaggctgcaaaccccaatcaggaacagcaagcagctacctttcagcactacgggtggaagaagaactcgaaatggcaaaattaacactccaaaataatcgactagtgcgaaggtggatcccactatgccaaggtgagatcaataggaaactgaaagaaggatgtttctaaaaccctgtataaggatcagtggattgttcagtctgatggaaaaattggttttgagacatcaaagatagagataaacagataagacctccaacaggacagagaaattgtaaacccagaaggaatttttcaaatttgagatcagtacatagctcacacgcagaagttacggttgtattgtatgtacattagcctggaatagatgcccgccatgtgccattacaacaaagagaagttcaatgacaagtttgtacgcttcatcatgttaaattgtcaaatttaggcc</dnaseqindica>|
| + | * <ref name="ref1"> |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001073499.1 RefSeq:Os12g0547500]|
| + | Frey N, Klotz J, Nick P. A kinesin with calponin-homology domain is involved |
| − | }}
| + | in premitotic nuclear migration. J Exp Bot. 2010 Jul;61(12):3423-37. doi: |
| − | [[Category:Genes]] | + | 10.1093/jxb/erq164. PubMed PMID: 20566563; PubMed Central PMCID: PMC2905203. |
| − | [[Category:Japonica mRNA]]
| + | |
| − | [[Category:Oryza Sativa Japonica Group]] | + | </ref> |
| − | [[Category:Japonica Genes]] | + | </references> |
| − | [[Category:Japonica Chromosome 12]]
| + | |
| − | [[Category:Chromosome 12]]
| + | |
| | + | ==Structured Information== |
| | + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 12]] |
