Difference between revisions of "Os10g0148100"

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Please input one-sentence summary here.
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The rice '''Os10g0148100''' was reported as ''' OsPRP3''' in 2010 <ref name="ref1" /> by researchers from the India.  
 
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<br>
 
==Annotated Information==
 
==Annotated Information==
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===Gene Symbol===
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*'''Os10g0148100 <=> OsPRP3'''
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<br>
 
===Function===
 
===Function===
Please input function information here.
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*'''OsPRP3''' is a cell wall protein, playing a crucial role in determining extracellular matrix structure of floral organ*s
 
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<br>
 
===Expression===
 
===Expression===
Please input expression information here.
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*Expression analysis showed that the '''OsPRP3''' transcript was mainly present in rice flower and accumulated abundantly during the late stage of the flower development.  
 
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<br>
===Evolution===
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===Mutant===
Please input evolution information here.
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*Our overexpression plants showed a significant increase in cold tolerance than the WT plants which is conferred by the accumulation of '''OsPRP3''' protein during cold treatment.
 
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*Microscopic analysis of the RNAi mutant flower revealed that blocking '''OsPRP3''' function caused significant defects in floral organogenesis.
You can also add sub-section(s) at will.
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<br>
 
 
 
==Labs working on this gene==
 
==Labs working on this gene==
Please input related labs here.
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*School of Bio Sciences & Technology, VIT University, Vellore 632 014, Tamil Nadu, India
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*School of Life Sciences & Biotechnology, Korea University, Seoul 136-701, Korea
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<br>
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==References==
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<references>
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<ref name="ref1">
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OsPRP3, a flower specific proline-rich protein of rice, determines extracellular matrix structure of floral organs and its overexpression confers cold-tolerance
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</ref>
  
==References==
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</references>
Please input cited references here.
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<br>
  
 
==Structured Information==
 
==Structured Information==
{{JaponicaGene|
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[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 10]]
GeneName = Os10g0148100|
 
Description = Protein of unknown function DUF1210 family protein|
 
Version = NM_001070699.1 GI:115481141 GeneID:4348110|
 
Length = 1372 bp|
 
Definition = Oryza sativa Japonica Group Os10g0148100, complete gene.|
 
Source = Oryza sativa Japonica Group
 
 
 
  ORGANISM  Oryza sativa Japonica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Japonica Chromosome 10|Chromosome 10]]|
 
AP = Chromosome 10:2876697..2878068|
 
CDS = 2876907..2877547,2877838..2878012|
 
GCID = <gbrowseImage1>
 
name=NC_008403:2876697..2878068
 
source=RiceChromosome10
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=NC_008403:2876697..2878068
 
source=RiceChromosome10
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>atgggggctctgccaagggctctagtcctcggcgtttgcgccgccgtcttgctggtgaacgtgctcgccgttgccgccgacggcgacgccgcggcggcggcgtccatggtcgtcggattggccaagtgcgccgactgcaccaggaagaacatgaaagctgaggccgttttcaagggtgttcgcgtggcgatcaagtgcaagaacagcaacggcgagtacgagacgaaggccaccggcgaggtcggcaagtctggcgcgttcgccgtgcccctcgcggcggacctcctcggcgacgacggcgagctgaggcagcaatgcttcgcgcagctgcacagcgcggcgtcgaaccagccatgccccgggcaggagccgtcgtggatcgtcaacgccgccgccgacaagaagaagaccttcgtcgccgtcgccggcgacacccacttcccgtcgtcggagtgcgcgtcggcgttcctctgcgacccgttccacaagaaggacttcttcttccactacaagaacccgtcgccgccagcgccggcggcgtaccacaagccgccgccgtcgtacacgcacccggcgccgccggtgtactcctacccgacgccggcgtactctcacccgacgccggtgtacaagcagccgctgccgacgccgtcgccgccgatctaccacccgccggcggaggagaagaaggtggcgatgcaggacgacgcggaggctgaccccgagctgttcaagaagctgctgccattgatcaagaagaatccattcctcaagttccccaagctcccgcctgtggaggtggaggcaaagccatag</cdnaseq>|
 
AA = <aaseq>MGALPRALVLGVCAAVLLVNVLAVAADGDAAAAASMVVGLAKCA                    DCTRKNMKAEAVFKGVRVAIKCKNSNGEYETKATGEVGKSGAFAVPLAADLLGDDGEL                    RQQCFAQLHSAASNQPCPGQEPSWIVNAAADKKKTFVAVAGDTHFPSSECASAFLCDP                    FHKKDFFFHYKNPSPPAPAAYHKPPPSYTHPAPPVYSYPTPAYSHPTPVYKQPLPTPS                    PPIYHPPAEEKKVAMQDDAEADPELFKKLLPLIKKNPFLKFPKLPPVEVEAKP</aaseq>|
 
DNA = <dnaseqindica>522..1162#57..231#atctcccaatccactacttcttgctgatcatcatatatctcttgtgagcttcagcaatgggggctctgccaagggctctagtcctcggcgtttgcgccgccgtcttgctggtgaacgtgctcgccgttgccgccgacggcgacgccgcggcggcggcgtccatggtcgtcggattggccaagtgcgccgactgcaccaggaagaacatgaaagctgaggccgttttcaagggtatgttgatatcataaataatcacgcaatatggtccaattaatcattgtcatttatttaaactactacctgaaaaatgcttgttctaagttctcataaatgcaagacgtttttggttgtcctaagtcaattttttttaaattaaaccaaatttatattaaaaatatatatcgcaatatttatgacaccaaattaatttcattaaatctatcattgaatatattcttttatattgtgtatatattttgtgttgaaaatgctgctgcatttttattcttgattttgttcaggtgttcgcgtggcgatcaagtgcaagaacagcaacggcgagtacgagacgaaggccaccggcgaggtcggcaagtctggcgcgttcgccgtgcccctcgcggcggacctcctcggcgacgacggcgagctgaggcagcaatgcttcgcgcagctgcacagcgcggcgtcgaaccagccatgccccgggcaggagccgtcgtggatcgtcaacgccgccgccgacaagaagaagaccttcgtcgccgtcgccggcgacacccacttcccgtcgtcggagtgcgcgtcggcgttcctctgcgacccgttccacaagaaggacttcttcttccactacaagaacccgtcgccgccagcgccggcggcgtaccacaagccgccgccgtcgtacacgcacccggcgccgccggtgtactcctacccgacgccggcgtactctcacccgacgccggtgtacaagcagccgctgccgacgccgtcgccgccgatctaccacccgccggcggaggagaagaaggtggcgatgcaggacgacgcggaggctgaccccgagctgttcaagaagctgctgccattgatcaagaagaatccattcctcaagttccccaagctcccgcctgtggaggtggaggcaaagccatagatggtcgccggcttcgccgcggcgccatgatcgatcgatcgaagcgaggaaacatgagtactagctggtttaattgcttcgtttctttgtgtgtttttcacaccggctactcgagctagttaattactgcccttctagcgttgttgaagcttggtctgttgcctgcctgctagcttaactattcagatataaataaaagcttctgttctc</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001070699.1 RefSeq:Os10g0148100]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 10]]
 
[[Category:Chromosome 10]]
 

Latest revision as of 13:30, 20 December 2016

The rice Os10g0148100 was reported as OsPRP3 in 2010 [1] by researchers from the India.

Annotated Information

Gene Symbol

  • Os10g0148100 <=> OsPRP3


Function

  • OsPRP3 is a cell wall protein, playing a crucial role in determining extracellular matrix structure of floral organ*s


Expression

  • Expression analysis showed that the OsPRP3 transcript was mainly present in rice flower and accumulated abundantly during the late stage of the flower development.


Mutant

  • Our overexpression plants showed a significant increase in cold tolerance than the WT plants which is conferred by the accumulation of OsPRP3 protein during cold treatment.
  • Microscopic analysis of the RNAi mutant flower revealed that blocking OsPRP3 function caused significant defects in floral organogenesis.


Labs working on this gene

  • School of Bio Sciences & Technology, VIT University, Vellore 632 014, Tamil Nadu, India
  • School of Life Sciences & Biotechnology, Korea University, Seoul 136-701, Korea


References

  1. OsPRP3, a flower specific proline-rich protein of rice, determines extracellular matrix structure of floral organs and its overexpression confers cold-tolerance


Structured Information