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| − | {{JaponicaGene|
| + | The rice '''Os11g0689300''' was reported as ''' OsPCBP''' in 2012 <ref name="ref1" /> by researchers from the China. |
| − | GeneName = Os11g0689300|
| + | <br> |
| − | Description = Similar to Calmodulin-binding protein MPCBP|
| |
| − | Version = NM_001075021.1 GI:115486690 GeneID:4351154|
| |
| − | Length = 5270 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os11g0689300, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| | | | |
| − | ORGANISM Oryza sativa Japonica Group
| + | ==Annotated Information== |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| + | ===Gene Symbol=== |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| + | *'''Os11g0689300 <=> OsPCBP''' |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| + | <br> |
| − | |
| + | ===Function=== |
| − | Chromosome = [[:category:Japonica Chromosome 11|Chromosome 11]]|
| + | *'''OsPCBP''' protein plays an important role during the late stage of pollen development |
| − | AP = Chromosome 11:29834440..29839709|
| + | <br> |
| − | CDS = 29834753..29835072,29835190..29835337,29835525..29836729,29836822..29837065,29839493..29839669<br>|
| + | ===Expression=== |
| − | GCID = <gbrowseImage1>
| + | *'''OsPCBP'''expression in transgenic lines via RT-PCR showed that a significant reduction in transcripts was correlated with this abortion phenotype. |
| − | name=NC_008404:29834440..29839709
| + | <br> |
| − | source=RiceChromosome11
| + | ===Evolution=== |
| − | preset=GeneLocation
| + | *Overexpression of '''OsPCBP''' in transgenic rice plants did not lead to phenotypic changes but did delay anther formation by about 1 week. Cytological observations at different stages revealed that microspores from the '''OsPCBP''' double-stranded RNA interference plants developed normally until the binucleate stage, but about half were later aborted. |
| − | </gbrowseImage1>| | + | <br> |
| − | GSID = <gbrowseImage2>
| + | ==Labs working on this gene== |
| − | name=NC_008404:29834440..29839709
| + | *School of Life Science, Ludong University, Yantai, Shandong 264025, China |
| − | source=RiceChromosome11
| + | *Key Laboratory of MOE for Plant Developmental Biology, College of Life Science, Wuhan University, Wuhan, Hubei 430072, China |
| − | preset=GeneLocation
| + | <br> |
| − | </gbrowseImage2>| | + | ==References== |
| − | CDNA = <cdnaseq>atggcttcagacacagaggatggtggagaggtgcaacctacagagacgaccaccgatgactcctcgtcgcccatgacggtggagaaggaggagcaggcggcgtcgactgggatggagatagtgaaggcaggaaatagtaatgctcaagaaactgggggtctctctctaaattacgaggaagcgagagctctccttggaagactggaatttcaaaaaggtaatgtagaagctgctctctgtgtgtttgatggcatagaccttcaagctgccatccaacgattccaaccatcacttactgataagacgacatctaagaaaggccagacgaaatcagaatcaggcatagaaaatcctgctacccttgttcttgaagccatttacttgaaatcattgtcccttcaaaagctaggaaaatcaacagaagctgcgaatcagtgcaagagcgttcttgattcagtcgaaagcatgttccagaatggtcctcctgacatcgaacagaagctacaagaaactatcaacaaatccgttgagcttctcccagaggcatggaagcaagctggatcacatcaagaagcattagcttcgtaccgacgcagtcttctcagccaatggaatcttgacgatgaatgttgcacaaggattcagaagagatttgctgcatttctgctgtatagctgtgtagaggggagcccacccagctcgggatcacaagttgaaggttcttttattcctaagaacaatgttgaagaggccattctacttctaatggtagtactgaagaaatggtaccaggggaagacgcattgggatccatcggtgatggaacatttgacatacgcattatcgctttgcgaccaaccatctcttcttgcaaagaatctagaagaggttttgcctggaatatatcctcgcaccgagagatggcacactctatctctttgctattatgcaattggtcagaaagaagttgcactaaactttctgaggaagtctctgaacaagcatgagaatccaaatgatataatggcattgttgttggctagtaagatatgcagtgaggagcgacatctagcttccgagggcgtcgaatacgcgagaagagcgatcaaactttctgaatcttcagatgttcatctgaagagtgtgggactccatttcttggggaattgtcttggcaagaagtcaaagactgtctcatcagatcaccaaaggtctctcttgcagaatgaaactctaaagtcattctcagagtcgattgctcttgaccggcacaatccagacctgatatttgacatgggagttgaatatgctgagcagaggaacatgaatgccgcactgcgatgcgcaaaggaatatatcgacgcaatcggtggatcagtctcaaaaggttggaggttgctagcattggttctttctgcacagcagagatatcctgaagcagaagtggcaacaaatgctgcattagatgagactgcaaagttggatcaagggtcattacttagtctaaaggctaagctgaaggttgctcaatcatcacctatggaagcagttgaagcataccgtgcccttcttgctcttgttcaagcccaaaagaattcctctggatctagcaagactgatgcagagggacagaatgacagtgtaagtgagtttgaaatctggcaaggacttgcaaacctgtactccagtctctcaatctggagagacgctgagatatgtctgcggaaggctagagccctgaaatcctactcggctgcaacaatgcatgcagaaggttacatgctcgaggcgcgagatcagaacaaggaggcattggctgcctacgtcaatgcattctcgatagagctagagcatgttccatccaaggtggccattggtgcacttctctgcaagcaagggtcaaggtatctccctgcagcgagatgcttcctctcggatgcactgagaattgagcctacgaacaggatggcttggcttcatttagggaaagttcacaggaatgatgggaggatcaatgatgctgctgattgttttcaggctgcggtgatgcttgaggagtctgaccctgtagagagttttaggtcactcgcatga</cdnaseq>|
| + | <references> |
| − | AA = <aaseq>MASDTEDGGEVQPTETTTDDSSSPMTVEKEEQAASTGMEIVKAG NSNAQETGGLSLNYEEARALLGRLEFQKGNVEAALCVFDGIDLQAAIQRFQPSLTDKT TSKKGQTKSESGIENPATLVLEAIYLKSLSLQKLGKSTEAANQCKSVLDSVESMFQNG PPDIEQKLQETINKSVELLPEAWKQAGSHQEALASYRRSLLSQWNLDDECCTRIQKRF AAFLLYSCVEGSPPSSGSQVEGSFIPKNNVEEAILLLMVVLKKWYQGKTHWDPSVMEH LTYALSLCDQPSLLAKNLEEVLPGIYPRTERWHTLSLCYYAIGQKEVALNFLRKSLNK HENPNDIMALLLASKICSEERHLASEGVEYARRAIKLSESSDVHLKSVGLHFLGNCLG KKSKTVSSDHQRSLLQNETLKSFSESIALDRHNPDLIFDMGVEYAEQRNMNAALRCAK EYIDAIGGSVSKGWRLLALVLSAQQRYPEAEVATNAALDETAKLDQGSLLSLKAKLKV AQSSPMEAVEAYRALLALVQAQKNSSGSSKTDAEGQNDSVSEFEIWQGLANLYSSLSI WRDAEICLRKARALKSYSAATMHAEGYMLEARDQNKEALAAYVNAFSIELEHVPSKVA IGALLCKQGSRYLPAARCFLSDALRIEPTNRMAWLHLGKVHRNDGRINDAADCFQAAV MLEESDPVESFRSLA</aaseq>|
| + | <ref name="ref1"> |
| − | DNA = <dnaseqindica>4638..4957#4373..4520#2981..4185#2645..2888#41..217#aactgggtgttcgccggtgagaccattatacggcgtcggcatggcttcagacacagaggatggtggagaggtgcaacctacagagacgaccaccgatgactcctcgtcgcccatgacggtggagaaggaggagcaggcggcgtcgactgggatggagatagtgaaggcaggaaatagtaatgctcaagaaactgggggtctctctctaaattacgaggtgagaatttttgaaaatttttcttttgaataagttgatcaacaaaaatggcgaatacaacatggcgtctttagggtctaacatcattagatgtcattattgacacaaggttatcgatttattatggcaaattggacatagatattactgtccaaggaggcctttttgagtgccattttgatcatagattccaaagtttgccacaaatgtgttatttcttttttttttcacatcttacaagcatttggaacatttcatgatgtattgatgtgtacaaaatgttctttgaatatgatgattgtgtgatagtgtaagcgtgctattcctttatctctttgtgattggggcaatcatacgttgatattatgattgtccaattgcaacgcaaagatttggtacttatagagtgttaactaaaattacatttgtgttatatccttgcatcaacaaccattttgcagtatatgagaattcataagtgttactaatacaaccagcaactcatgcatttgccagcccaaacaattttaaagagatatcatgtagttttactttttaatgaaaattaaaacatttcaacttctaaaatgttattgttgagtaaaaaaagaaaaaaattgaaatttcaaatatttatgaccaaacttttgaccttatttgttaagatatgtaccaattctaacatttagatttgattataacattcaataatatgcatgcattatagacattttttttcttacgagaagtctaattgtgaaccgtacgtatgcatgcaactatttttattgttgtttgtttgtttctgactattattgaaccgatggcactattgacataaatagagataattgttatgggcaaaggtttcagttttgtataacactgctaagagctagacgacgttagctttgtgaagaccaagcgagagtatagatttgggataataactttggagaaaaacaagagaaattcaaatttattgctatattctaaagactaaccaaataccctttatggcaatctgatcaaattattacagaaggaaatatcattcccctaaatgttttccacgcttgaatattaattctcacatgcttgattgagggtactactccttggccaggtcttggacttagacatgggcctcagcctcttgacctaatcccctaaacataataaagccatacattatagttatctagaggtaattaaaatcaactttgatatccaaccacactgggctagctgttggcattggcaatagtctctatatcaggctatgcttgcgggttcttgcgtgtcgaaggaaacattccattatacaacttttagttcttctaattatcaactagaggtgttcattgagttagttgatatgtattatccatggtacaagcatcggtcctttatgtacggtagatgccatagattgagagaaaacaacaaaattgattttctctctaattaacatgggagtttctaaaaaagatctacttttttgagacaaggctgactatattaaataatatagaaaaaaattaaaaaaaaaaccaccccataagttatttgaagtttgacattccatcccataagttattttgttgcatatgtccaccctcctactcaattttgtttaaaaaacaccctagtatgcactcgcttaaccgaatcagcctgttatcgctgatgtagagctaccacatactaagctagccaagttaattttgtccaagtccttgcattaaatttattcttcatgtttcattgaactttgtttagatacagtgaaactcaatgcaataatatttaagctcccatcaccattttctatgaatggaatttcaaaaaaaagtgtttagactatactctaaaagtctttagtttgggtaaagaccgtattgatggctcataatttatgaaaacatgttgatccgattaaatacgtgtgcactggagtggattttgcaatgaaactaagtaggtggtgggcatttgtaacaaaatgacttatgaggtggattatcaaatttcaagtgacttatgggggtggtttttgcaaatttccccaaaaatgaaaagtattacaacattgttgttacaataaaaggaaataaaagatctaccaacatataataaagaggcttcacctcttggaaatataccatgaaatgtgagcaaacaagcgtaccaataatgctgaccaactccgacacgtgtaaaaataattctattctctgataaatgtagggatttttagcatagaaaagatcatgacagacacattatgttgagaaatatttaactgttgaattattgtgatattgatctccagttatatttgcatttagaattagcttagcacatgaagagttacattttttttctttggactccaagtatatcggtatgcctattgattgataggaagcgagagctctccttggaagactggaatttcaaaaaggtaatgtagaagctgctctctgtgtgtttgatggcatagaccttcaagctgccatccaacgattccaaccatcacttactgataagacgacatctaagaaaggccagacgaaatcagaatcaggcatagaaaatcctgctacccttgttcttgaagccatttacttgaaatcattgtcccttcaaaagctaggaaaatcaacaggtacacataagcacataccactagaaaactatttttttgttgctttttggatatcatatgtactaaccaaaaaattatcaatgaacatgcagaagctgcgaatcagtgcaagagcgttcttgattcagtcgaaagcatgttccagaatggtcctcctgacatcgaacagaagctacaagaaactatcaacaaatccgttgagcttctcccagaggcatggaagcaagctggatcacatcaagaagcattagcttcgtaccgacgcagtcttctcagccaatggaatcttgacgatgaatgttgcacaaggattcagaagagatttgctgcatttctgctgtatagctgtgtagaggggagcccacccagctcgggatcacaagttgaaggttcttttattcctaagaacaatgttgaagaggccattctacttctaatggtagtactgaagaaatggtaccaggggaagacgcattgggatccatcggtgatggaacatttgacatacgcattatcgctttgcgaccaaccatctcttcttgcaaagaatctagaagaggttttgcctggaatatatcctcgcaccgagagatggcacactctatctctttgctattatgcaattggtcagaaagaagttgcactaaactttctgaggaagtctctgaacaagcatgagaatccaaatgatataatggcattgttgttggctagtaagatatgcagtgaggagcgacatctagcttccgagggcgtcgaatacgcgagaagagcgatcaaactttctgaatcttcagatgttcatctgaagagtgtgggactccatttcttggggaattgtcttggcaagaagtcaaagactgtctcatcagatcaccaaaggtctctcttgcagaatgaaactctaaagtcattctcagagtcgattgctcttgaccggcacaatccagacctgatatttgacatgggagttgaatatgctgagcagaggaacatgaatgccgcactgcgatgcgcaaaggaatatatcgacgcaatcggtggatcagtctcaaaaggttggaggttgctagcattggttctttctgcacagcagagatatcctgaagcagaagtggcaacaaatgctgcattagatgagactgcaaagttggatcaagggtcattacttagtctaaaggctaagctgaaggttgctcaatcatcacctatggaagcagttgaagcataccgtgcccttcttgctcttgttcaagcccaaaagaattcctctggatctagcaagactgatgcagaggtgtgtttccttgatccaaaccaatgcacaaaatcacagtttatatttgtgtaatctgctcagattttagcataatgtgattattacaaatatatttaatttgtttggttggttgtagtataaatgtagagggaatcactaccataaatttttctctctcatgttttgggtcttttttaacattcagggacagaatgacagtgtaagtgagtttgaaatctggcaaggacttgcaaacctgtactccagtctctcaatctggagagacgctgagatatgtctgcggaaggctagagccctgaaatcctactcggctgcaacaatgcatgcagaaggtgatcaacccaaccaaacttgaactttcaccacttctatataacactgacatgacaattctctgcgtttaactgaattcaacatcaaaatctaactcatggttgctataaattcaggttacatgctcgaggcgcgagatcagaacaaggaggcattggctgcctacgtcaatgcattctcgatagagctagagcatgttccatccaaggtggccattggtgcacttctctgcaagcaagggtcaaggtatctccctgcagcgagatgcttcctctcggatgcactgagaattgagcctacgaacaggatggcttggcttcatttagggaaagttcacaggaatgatgggaggatcaatgatgctgctgattgttttcaggctgcggtgatgcttgaggagtctgaccctgtagagagttttaggtcactcgcatgaggatatcacaattcacaaacatgttctctcttgttttttcaggttcatagtatttgagagaattaacacacattagatattactaaggttgttgtatctaaaaatatgtgtaatcctgtatattttttttctttctgaactctatcaggcattaacaaacagagtggtgtatcaaagctgtaattaattaacaactcaccgtccttatataattgttttacttggtgatttcatctggtgtagctccagaaaataactggatttgataatgtaatatgaatcccaagtacataattcagcaaagattatagcc</dnaseqindica>|
| + | A Calmodulin-Binding Protein from Rice is Essential to Pollen Development |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001075021.1 RefSeq:Os11g0689300]|
| + | </ref> |
| − | }}
| + | |
| − | [[Category:Genes]] | + | </references> |
| − | [[Category:Japonica mRNA]]
| + | <br> |
| − | [[Category:Oryza Sativa Japonica Group]] | + | ==Structured Information== |
| − | [[Category:Japonica Genes]] | + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 11]] |
| − | [[Category:Japonica Chromosome 11]]
| |
| − | [[Category:Chromosome 11]]
| |
