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| − | {{JaponicaGene|
| + | The rice '''Os01g0513900''' was reported as ''' dbs1''' in 2005 <ref name="ref1" /> by researchers from the Japan. |
| − | GeneName = Os01g0513900|
| + | <br> |
| − | Description = Similar to Kinesin heavy chain (Fragment)|
| + | ==Annotated Information== |
| − | Version = NM_001049721.1 GI:115436997 GeneID:4323990|
| + | ===Gene Symbol=== |
| − | Length = 6906 bp|
| + | *'''Os01g0513900 <=> dbs1''' |
| − | Definition = Oryza sativa Japonica Group Os01g0513900, complete gene.|
| + | <br> |
| − | Source = Oryza sativa Japonica Group
| + | ===Function=== |
| | + | *'''dbs1'''mutation causes a severe defect in DBS1 function but does not completely shut it down. We discuss the leaky phenotype of dbs1 under the restricted functioning of OsNACK. |
| | + | <br> |
| | + | ===Mutant=== |
| | + | *'''DBS1''' is involved in the growth and development of organs but not in organ initiation or organogenesis. Positional cloning of '''DBS1''' revealed that it encoded a NACK-type kinesin-like protein (OsNACK), homologous to the essential components of a mitogen-activated protein kinase cascade during plant cytokinesis. A BLAST search indicated that DBS1 was the only gene encoding the '''OsNACK'''-type protein in the rice genome, and the dbs1 mutant produced only small amounts of the translatable '''DBS1''' mRNA. |
| | + | <br> |
| | | | |
| − | ORGANISM Oryza sativa Japonica Group
| + | ==Labs working on this gene== |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| + | *Bioscience and Biotechnology Center, Nagoya University, Nagoya, Aichi, 464-8601 Japan |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| + | <br> |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| + | ==References== |
| − | |
| + | <references> |
| − | Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
| + | <ref name="ref1"> |
| − | AP = Chromosome 1:19807783..19814688|
| + | The Rice Mutant dwarf bamboo shoot 1: A Leaky Mutant of the NACK-type Kinesin-like Gene Can Initiate Organ Primordia but not Organ Development |
| − | CDS = 19809131..19809377,19809532..19809621,19809707..19809807,19809909..19810022,19810116..19810197<br>,19810327..19810394,19810482..19810541,19810620..19810744,19811398..19811596<br>,19811677..19811808,19811887..19811979,19812095..19812979,19813074..19813399<br>,19813738..19814080|
| + | </ref> |
| − | GCID = <gbrowseImage1>
| + | |
| − | name=NC_008394:19807783..19814688
| + | </references> |
| − | source=RiceChromosome01
| + | <br> |
| − | preset=GeneLocation
| + | |
| − | </gbrowseImage1>| | + | ==Structured Information== |
| − | GSID = <gbrowseImage2>
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]] |
| − | name=NC_008394:19807783..19814688
| |
| − | source=RiceChromosome01
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>| | |
| − | CDNA = <cdnaseq>atgggtgtatcaagacctccaagcacccctgcatcaaagattgagcgcacaccgatgtcgaccccaacccctggtggcagcactagggtcaaggaggagaagatttttgtcacagtgagggtgcgaccattgagcaagaaagaactggccttgaaggatcaggtggcatgggagtgcgatgataaccagacaattttgtacaagggccccccacaggatcgggctgcacccacctcttacactttcgacaaggtgtttggaccagcttcccagacagaagtggtgtatgaagagggagctaaggatgttgctatgtctgcattgacaggcattaatgccaccatttttgcctatggtcaaaccagcagtggtaagacattcaccatgagaggcgtcacagagagtgctgtaaatgatatatacaggcacatagaaaatactcctgagagggactttatcatcaagatatctgctatggaaatttacaatgagattgtgaaggatcttctacgacctgagtctaccaatcttcgcttgttagatgatcctgagaaaggaacaattgtagaaaaactggaagaagaaattgccaaggatagccaacatcttaggcatctaatcagtatttgtgaagaacaaagacaggttggggagactgcactaaatgacaccagttcacgttcccaccagatcattaggctgacagttgagagtaggctccgtgaagtgtcaggatgtgttaaatcttttgtggctaatctgaattttgttgatcttgctggaagtgaacgagctgcacaaacacatgcagttggcgcaagactgaaagaaggctgccatataaatcgcagcttactgactcttactactgtcatcagaaagctaagctcggataaaagaagtggacacataccctatcgagactcgaagttgacacgcattctccagctttctttgggtggaaatgcaagaacagccatcatctgtaccatgagtccagcgcaaacacatgtagaacaatctagaaatactctattctttgcaacctgtgccaaggaggttacgaataatgcaaaagttaatatggtggtatcagataagcaattggtgaagcacctacagatggaagttgctagactcgaagctgagctgagaacccctgatcgtgcctcctcttctgagatcattataatggaaagggacaggaagattagacagatggaaaaagaaatggaggaactcaagaagcaaagagacaatgcacagttgaaacttgaagaattacagaagaagatgggtgataatcagccaggatggaatccttttgactcaccacaaaggacacggaaatgcctcacatattctggatcactacagccaagtaacaaaatgaagatacggagctcgattagacaatcagccactgctccatttatgttaaagcatgaaattcgcaagcttgagcagctacaacagcagcttgaggttgaggctaaccgagctattgaagtactgcacaaagaagtcgaatgccataaacatggcaatcaagatgcagcagaaactattgctaaactacaggctgaaatcagggggatgcaatctgtcagatctgacagagatgttgacatgatcacagatgaaggaaatggatctgatttgaaagaagaaattagtagacttcatatgcaagacaatgatattgcaaaacttgaggctaaactagaaaatgtacagaggtctattgatagattggtgatgtcacttccaaatgttggcacacaatgtaacgagactacaccaaagtccaacagagcaaagaagaagaagaggatgcttcttccactgggcgtgagcaacataaacagaccaaatctgataagagcaccatgctctcccctctcttctagtaggcctttagagccagaagttgagaatagggctccagagggtgacactgtgtctcatgaaggttcagaaagggctactcctactaagagtgaagacactggagatgtatcatcgcgtgatgaaaccccacgctataggcgatccagctcagtgaacatgaaaaagatgcagaagatgttccaaaatgctgctgaggagaatgttagaaatatccgggcttatgtcactgaactgaaggagagagttgcaaaacttcaataccaaaagcagctgcttgtctgtcaggtcttggagttggaatcgaatgaaggcaagacaaatgacatggaagaagattcagaggaaaatgcaggatctctacaggatggtcctgattcatgggacagattatttaaggagcagatgcagcacattatccaactgtgggatctctgtcatgtatcaatcatacacaggacccagttctacttattattcaggggggatagggctgatcagatatatattgaagtcgaagttagaagactgacatggttgcaacagcattttgctgaggtgggcgatgcaagtcctgcagctggtgatgactccacaatttctttagcctcaagtatcaaggcattgaggaatgagcgagaattcctcgcgagaaggatgggctcaaggctgacagaagaagagcgagagcgcctcttcatcaaatggcaggtgcccctggaggcgaagcagcggaagctccagcttgtgaacaggctctggacagaccccaatgaccaagctcacattgatgagagcgccgatatagtggccaggctggttggtttctgtgagggtggtaacatcagcaaggagatgtttgagctcaattttgcagtccctgcaagtaggaagccatggctgatgggttggcagcccatttcaaacatgatcagggagaagacacaactttggtaa</cdnaseq>|
| |
| − | AA = <aaseq>MGVSRPPSTPASKIERTPMSTPTPGGSTRVKEEKIFVTVRVRPL SKKELALKDQVAWECDDNQTILYKGPPQDRAAPTSYTFDKVFGPASQTEVVYEEGAKD VAMSALTGINATIFAYGQTSSGKTFTMRGVTESAVNDIYRHIENTPERDFIIKISAME IYNEIVKDLLRPESTNLRLLDDPEKGTIVEKLEEEIAKDSQHLRHLISICEEQRQVGE TALNDTSSRSHQIIRLTVESRLREVSGCVKSFVANLNFVDLAGSERAAQTHAVGARLK EGCHINRSLLTLTTVIRKLSSDKRSGHIPYRDSKLTRILQLSLGGNARTAIICTMSPA QTHVEQSRNTLFFATCAKEVTNNAKVNMVVSDKQLVKHLQMEVARLEAELRTPDRASS SEIIIMERDRKIRQMEKEMEELKKQRDNAQLKLEELQKKMGDNQPGWNPFDSPQRTRK CLTYSGSLQPSNKMKIRSSIRQSATAPFMLKHEIRKLEQLQQQLEVEANRAIEVLHKE VECHKHGNQDAAETIAKLQAEIRGMQSVRSDRDVDMITDEGNGSDLKEEISRLHMQDN DIAKLEAKLENVQRSIDRLVMSLPNVGTQCNETTPKSNRAKKKKRMLLPLGVSNINRP NLIRAPCSPLSSSRPLEPEVENRAPEGDTVSHEGSERATPTKSEDTGDVSSRDETPRY RRSSSVNMKKMQKMFQNAAEENVRNIRAYVTELKERVAKLQYQKQLLVCQVLELESNE GKTNDMEEDSEENAGSLQDGPDSWDRLFKEQMQHIIQLWDLCHVSIIHRTQFYLLFRG DRADQIYIEVEVRRLTWLQQHFAEVGDASPAAGDDSTISLASSIKALRNEREFLARRM GSRLTEEERERLFIKWQVPLEAKQRKLQLVNRLWTDPNDQAHIDESADIVARLVGFCE GGNISKEMFELNFAVPASRKPWLMGWQPISNMIREKTQLW</aaseq>|
| |
| − | DNA = <dnaseqindica>1349..1595#1750..1839#1925..2025#2127..2240#2334..2415#2545..2612#2700..2759#2838..2962#3616..3814#3895..4026#4105..4197#4313..5197#5292..5617#5956..6298#ggagagaattcaaactgtactacgtagtagtactagcgctagcactagcgagcggtggttgagcggcgcatcgcacgcgccgcccttgaccagcgacggcgagaagctcctccgcctccgcctcctcgtcgtcgggcgcgcgcccaccgccggcggcggctctcggcggcagcaggcagcggcagtggcctcgatcggcgggttgcgcggtcggatccccaatccccgggctgcgctggtgagtggttttcctcagctgcttctgcttgtccccgtgcgtctccctctcttccgagccccctggttctgctctgcctgcggccggcgccgttttcccgccgggcccgacggagtagccgagaggtggtgagtccgtaaggagggggggtgcagatgctggcggcggcggaaccggccgatctgccgctgtggcctcccgtgcgttcgcgcggcgcggcggatggagaacggaagttggtcgggtttgccgctcggaggttacagggcgggttcgtccatgaaaggaatgctgtttattttggcgctaactcgtggaattttttgtttgtgaactcagtttaccagattgcaatttccatacatgaatatacttgctagattttttttaagatcggtatctacttgctagattgagctttccaaatattaatacacttcgtctccctctcattttatttcttaccaattttgctttgcgtgtttttctcggcccatggccctaatctgaaattgtggggttttttttggaggtggggagaggggatccgaagtttttgaattcggtaccatttcgtaatttagattggggtgtatctgaatgtgacccgagcgatgcagataacacatttcttcttatgaagattacatcttattggcacagctttatgtatgaaattgagtaattttcgccccacgctataattttaggaaaaaacacccgcacatgtgcagatgtgcttgccttgtttagtgccgtccattcattcgtttttcattttaaaatttaacattaatggtggtaatagatctccttgtaatactactcataatggtgaagtaaaacatgcaatttactccgtttgtaataaatgaaatatttgtgtgttgactatgtaatttatttcctttgtaatagtgaaatagttgtgttggctaggtcagcacattgttgctgcagagctatcttcccggaattgtttgccaatattatgtgcaactgtgtgataaattgaatctgaccattttttgccttgtgccagcttcgtgagaaggctgggttcttgctgttttccccagacttcaaggaatctgcaatttactagcgaaaatgggtgtatcaagacctccaagcacccctgcatcaaagattgagcgcacaccgatgtcgaccccaacccctggtggcagcactagggtcaaggaggagaagatttttgtcacagtgagggtgcgaccattgagcaagaaagaactggccttgaaggatcaggtggcatgggagtgcgatgataaccagacaattttgtacaagggccccccacaggatcgggctgcacccacctcttacactttcggtaggcttttcagtgatctattcatgactgcatatctcaagcaattatgtttgtagtgacactcttgatcaatgacttcatatctcaatcctataagtttgaagttacctcagtagctaaattgactaatttaaattccatcttacccttccagacaaggtgtttggaccagcttcccagacagaagtggtgtatgaagagggagctaaggatgttgctatgtctgcattgacaggcattaatggtaaattaattctcactcagtagtttgaataaagttgaatgatcctttatctactctttattctttaccttcctttgttttgcagccaccatttttgcctatggtcaaaccagcagtggtaagacattcaccatgagaggcgtcacagagagtgctgtaaatgatatatacaggcacatagaaaatgtgagtttttttatacatggagcaacaaaatcatgctatctatattgctttctaaaatgcacataacacataattgtttcttgcttttgttgattgcatagactcctgagagggactttatcatcaagatatctgctatggaaatttacaatgagattgtgaaggatcttctacgacctgagtctaccaatcttcgcttgttagatgatcctgaggtttgtttccagttcgacagagtctatgcactgcccccacatattctcttgcatgccatgattatcctttaataaattgttatggtttgacagaaaggaacaattgtagaaaaactggaagaagaaattgccaaggatagccaacatcttaggcatctaatcagtatttgtgaaggtaactactatctgtatatattgtcttaacttattttttcaagaagaaccagaagaaatgggttgccttatttacttttttttttgttgacgcggtagcctattgcttatgatgtctttatgactgcagaacaaagacaggttggggagactgcactaaatgacaccagttcacgttcccaccagatcattaggctggtatatataaaaataagcctccatgtttatgttagatctttttcatgaaagtgagaaaaataattattgtgcattatctctatccagacagttgagagtaggctccgtgaagtgtcaggatgtgttaaatcttttgtggctaatctggtaagcataacgtcctcattttgcaatggtgtacatgctgtttttttaatctcaataatatgtgttgctttttcacagaattttgttgatcttgctggaagtgaacgagctgcacaaacacatgcagttggcgcaagactgaaagaaggctgccatataaatcgcagcttactgactcttactactgtcatcagaaagctaaggtatgattttctaaagaaagaaagaaaaaactctgggtctattatctcttatctgcaccaatcttgaaagtagtcgctgagttacctcgatgcactcatgggttagtctcagttctaatgttatctgttgatttgtaatgatatcagtatgttaatgatgtatcttatctcctaatgaatttctaaaacatgctaatgagattcatcagatcaaaatattcccaggccactttgtttaagtgggaggcaattgctctgtactctgtcctattgccactatactgtttaatcattctgcatatttagaactaaagtgagttttattaaaatctcatagctgcaacacagttaattgtaagttcttgaatgtgttggctaagtgacattggtatggcaggactaataagcagcattgtgtatttgcagtgtcatgaacatgttaaactagacaatttatttgcagtgtcatgaacacgttaaactagataatttatttgcagtgtcatgctaatacacagtttgagacctcttttctacttagataatttactgcatatttgtatttttaccgtttcttggtttgaacaggaaactataatgaagtatatctttattgggaatattagcagactgactctaaattttcaatgcagctcggataaaagaagtggacacataccctatcgagactcgaagttgacacgcattctccagctttctttgggtggaaatgcaagaacagccatcatctgtaccatgagtccagcgcaaacacatgtagaacaatctagaaatactctattctttgcaacctgtgccaaggaggttacgaataatgcaaaagttaatatggtaagatctgtgactgtgatgcatcatttatttacttatgagaatgcaaatcttcatcccttgggccttggtacgtacaggtggtatcagataagcaattggtgaagcacctacagatggaagttgctagactcgaagctgagctgagaacccctgatcgtgcctcctcttctgagatcattataatggaaagggacaggaagattagacaggtaatgtctatgctcaaggatgaagttcactggaatcatttccattttgtaactgacctaattaagtgaacactgcagatggaaaaagaaatggaggaactcaagaagcaaagagacaatgcacagttgaaacttgaagaattacagaagaagatgggtgataatcagccagtgagtatttgccctttccttgcaaatttacttttctttcaaaggatatcagccagtcagaaccacattcatttactgtcaacctaatctttccgaaacccatgttttcttttagggatggaatccttttgactcaccacaaaggacacggaaatgcctcacatattctggatcactacagccaagtaacaaaatgaagatacggagctcgattagacaatcagccactgctccatttatgttaaagcatgaaattcgcaagcttgagcagctacaacagcagcttgaggttgaggctaaccgagctattgaagtactgcacaaagaagtcgaatgccataaacatggcaatcaagatgcagcagaaactattgctaaactacaggctgaaatcagggggatgcaatctgtcagatctgacagagatgttgacatgatcacagatgaaggaaatggatctgatttgaaagaagaaattagtagacttcatatgcaagacaatgatattgcaaaacttgaggctaaactagaaaatgtacagaggtctattgatagattggtgatgtcacttccaaatgttggcacacaatgtaacgagactacaccaaagtccaacagagcaaagaagaagaagaggatgcttcttccactgggcgtgagcaacataaacagaccaaatctgataagagcaccatgctctcccctctcttctagtaggcctttagagccagaagttgagaatagggctccagagggtgacactgtgtctcatgaaggttcagaaagggctactcctactaagagtgaagacactggagatgtatcatcgcgtgatgaaaccccacgctataggcgatccagctcagtgaacatgaaaaagatgcagaagatgttccaaaatgctgctgaggagaatgttagaaatatccgggcttatgtcactgaactgaaggagagagttgcaaaacttcaataccaaaagcagctgcttgtctgtcaggttatgatcgtttatcttgcacacataagttttgttcatgcaaaggttactttgtttcaccactaaaatatgttttcttgtaatcttactacaggtcttggagttggaatcgaatgaaggcaagacaaatgacatggaagaagattcagaggaaaatgcaggatctctacaggatggtcctgattcatgggacagattatttaaggagcagatgcagcacattatccaactgtgggatctctgtcatgtatcaatcatacacaggacccagttctacttattattcaggggggatagggctgatcagatatatattgaagtcgaagttagaagactgacatggttgcaacagcattttgctgaggtgggcgatgcaagtcctgcagctggtgatgactccacaatttctttagcctcaaggtaaatattagcctttacttctttgagttttacgggctatgttagttaattccagaaaaagaaaatagtgttggaaggtctaaaaaagagtcatgtcccctaggcctttaaaatggatgttgctggaagcaaaaccttgtaatctgttttctcacagtagttttatcctctgtaaaagaacacttactgagaaaccttatatgttgatagtgaagatggagcttagttatctgatagaaaagccttaacatgaatgtttttccgagtcaaatgtttcattagtcataactgatatcgaatcgtgatatataaaccaattatctgatttcatgttgcagtatcaaggcattgaggaatgagcgagaattcctcgcgagaaggatgggctcaaggctgacagaagaagagcgagagcgcctcttcatcaaatggcaggtgcccctggaggcgaagcagcggaagctccagcttgtgaacaggctctggacagaccccaatgaccaagctcacattgatgagagcgccgatatagtggccaggctggttggtttctgtgagggtggtaacatcagcaaggagatgtttgagctcaattttgcagtccctgcaagtaggaagccatggctgatgggttggcagcccatttcaaacatgatcagggagaagacacaactttggtaagcagagatatgcccatcttccttgttaagatgaggtagaaggatcatataatctcataaaaattttggtgctctggaccaaaggtgaagtggctgagcttctgggttggtcaaggccaggattgacagggggtgaattgatgcaagcatggtgccaacatgcttcagtctgtgtagaatcttctcttgaacctgtattcttctttcatcaccagtgtagagagacttggatgttctcatattctttattaagtagtgttaagaaatgattccgttccaaattttgcccccaaattgatgatcaaaagttcgtcttgccatgtggttaaaggctgaatcatttaaagaatgcatagagatatttccactctttctcacaggaacacatggagttcaggaaccaggatctcgcggagttagaaaatattgtggttctcgctgtacaacgaggacctctccttttggcttgtgctatttgttccgctttctggattgttctagcgtctttctagttccagattcttctttcttggcgagtaacttctcgtcagacatcttccttttagttttgttagtcaacctcgtctgcatgagttatcagtgattttg</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001049721.1 RefSeq:Os01g0513900]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]]
| |
| − | [[Category:Japonica Chromosome 1]] | |
| − | [[Category:Chromosome 1]]
| |
