Difference between revisions of "Os01g0588900"

From RiceWiki
Jump to: navigation, search
(Annotated Information)
 
(2 intermediate revisions by 2 users not shown)
Line 1: Line 1:
Please input one-sentence summary here.
+
The rice '''Os01g0588900''' was reported as ''' log''' in 2007 <ref name="ref1" /> by researchers from the Japan.  
 
+
<br>
 
==Annotated Information==
 
==Annotated Information==
 +
===Gene Symbol===
 +
*'''Os01g0588900 <=> log'''
 +
<br>
 
===Function===
 
===Function===
Please input function information here.
+
*The '''LONELY GUY (LOG)''' gene of rice is required to maintain meristem activity and its loss of function causes premature termination of the shoot meristem. '''LOG''' encodes a novel cytokinin-activating enzyme that works in the final step of bioactive cytokinin synthesis.
 
+
<br>
 
===Expression===
 
===Expression===
Please input expression information here.
+
*'''LOG''' messenger RNA is specifically localized in shoot meristem tips, indicating the activation of cytokinins in a specific developmental domain
 
+
<br>
===Evolution===
 
Please input evolution information here.
 
 
 
You can also add sub-section(s) at will.
 
  
 
==Labs working on this gene==
 
==Labs working on this gene==
Please input related labs here.
+
*Graduate School of Agricultural and Life Sciences, University of Tokyo, Yayoi, Bunkyo, Tokyo 113-8652, Japan.  
 +
*RIKEN Plant Science Center, Tsurumi, Yokohama 230-0045, Japan.
 +
*Research Institute for Bioresources, Okayama University, Kurashiki, Okayama, 710-0046 Japan.
 +
<br>
 +
==References==
 +
<references>
 +
<ref name="ref1">
 +
Direct control of shoot meristem activity by a cytokinin-activating enzyme
 +
</ref>
  
==References==
+
</references>
Please input cited references here.
+
<br>
  
 
==Structured Information==
 
==Structured Information==
{{JaponicaGene|
+
    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]]
GeneName = Os01g0588900|
 
Description = Conserved hypothetical protein 730 family protein|
 
Version = NM_001049974.1 GI:115438023 GeneID:4324445|
 
Length = 4079 bp|
 
Definition = Oryza sativa Japonica Group Os01g0588900, complete gene.|
 
Source = Oryza sativa Japonica Group
 
 
 
  ORGANISM  Oryza sativa Japonica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
 
AP = Chromosome 1:24611916..24615994|
 
CDS = 24612255..24612350,24612458..24612601,24613353..24613423,24613525..24613624,24614419..24614449<br>,24615079..24615176,24615684..24615872|
 
GCID = <gbrowseImage1>
 
name=NC_008394:24611916..24615994
 
source=RiceChromosome01
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=NC_008394:24611916..24615994
 
source=RiceChromosome01
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>atggcaatggaggctgcggcggagaggagcgccggagcaggggcggcggcgacggcggcgccggagagcggtggcggtggtgcaggggagaggcggtcgcggttcaggcggatctgcgtgtactgcggcagcgccaaggggaggaaggccagctaccaggacgccgccgtcgagctcggcaaggaactggtcgagaggggcatagacctggtctacggcggtggctccatcggcctcatgggcctcgtctcccacgctgttcacgacggtggtcgccatgtcattggggtcatcccgaaatccttgatgcccagagaggtcactggtgagcctgttggtgaagttagagcggtctctggcatgcacgagaggaaggctgaaatggcccggtttgctgatgcgttcattgcactgcctggcggctacgggactcttgaggagttgcttgaggtcatcacctgggcccaactaggaatccacaagaagccggttggccttctgaatgtcgacgggttttatgatccttttctatccttcattgacatggctgtcagcgaaggattcatagcggaggatgcgcggcgcattatcatctcggctccaactgccagggagctagttctgaagcttgaggagtatgttcccgagtacgaggtcggcttggtttgggacgatcagatgccgcacagcttcgcgcctgacctcgagaccaggatcacctcatcctga</cdnaseq>|
 
AA = <aaseq>MAMEAAAERSAGAGAAATAAPESGGGGAGERRSRFRRICVYCGS                    AKGRKASYQDAAVELGKELVERGIDLVYGGGSIGLMGLVSHAVHDGGRHVIGVIPKSL                    MPREVTGEPVGEVRAVSGMHERKAEMARFADAFIALPGGYGTLEELLEVITWAQLGIH                    KKPVGLLNVDGFYDPFLSFIDMAVSEGFIAEDARRIIISAPTARELVLKLEEYVPEYE                    VGLVWDDQMPHSFAPDLETRITSS</aaseq>|
 
DNA = <dnaseqindica>3645..3740#3394..3537#2572..2642#2371..2470#1546..1576#819..916#123..311#gcctcaactcaagcaaaagcctccccctccaattcaatttcctctctctccatctctctcctccaatcgctgcctcgctcacgcacgcgcgctctacctacctgagggcgaggctggtgccgatggcaatggaggctgcggcggagaggagcgccggagcaggggcggcggcgacggcggcgccggagagcggtggcggtggtgcaggggagaggcggtcgcggttcaggcggatctgcgtgtactgcggcagcgccaaggggaggaaggccagctaccaggacgccgccgtcgagctcggcaaggaactggtcaggattcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttttttgatttgattgattgtcctttctccctccctccctcccaaatccgtcataaaaatccaatcttttcattttctacttttctttctttcttccccctccgggcttcgccggccggctcgccggcggcggcggcggcgaccgactctccggctcgccgtggccgtttctctcttggtgcgcgtccctagtatcctaggcagctatagtagtaggttttctagatgagcaaacaaaaccaatcatgattgctggcgagcgcggtgacctcagttgcgtcccgaacggaacaacaatcttacaatttttgcatgcatcaaaacgccaccaccatctcctccctctctcccccaccttttggatttttcttgtcgactcaagagagtagagagaggttgattggtttcttgtttttttacatttccccttttgtttttggttcgtgttggtgcaggtcgagaggggcatagacctggtctacggcggtggctccatcggcctcatgggcctcgtctcccacgctgttcacgacggtggtcgccatgtcattgggtgagtgatccatttgtccatctctctctctctctatctttctctggttgcttgccaggtgagatgtgtgagaatgcatgcgtcgctgggatgataaaaacggcagcttttgatcgccagattgggggtaggaggagtagtaggtgctgagtccctgcccattttcgtctctctttcttgggtctcagtgtggggggggggggggcattttgaatgcatctggggccttttcgcctccgtttccgaaaggctactcgcctgcatgcttgaattgttgtttgtgcagcagcacactccaacttcacttggcctgctcctgcatagctcagctcctgcaatctgctgctgctgctgctgctgctagcttgctagtactagtgctcttctcttctttgctctcattattgtgcagtgtttatttggtccagctccctctctctctctatctatctgtattgctagtgtggtgtagctgtgctgcctgtgcaatagcctgggccttggctttgccagtctctttaccaagggagagaaagcaagcctgcttgttcttactacacctgtttgaccgcttttgtgctaaaaactgatgtgcttttctgtttcctctctctttgtgttcttggcagggtcatcccgaaatccttgatgcccagagaggtgagctgtctactcctggaagctagtaggagtagtactactgctattacacaagctcgatcgatagagatagatataatcttgattgctgtttttaatgtggccgtgctgctccattttgttcggggcgaaattgatgaatgctttcaattcctctccctgctggcttctgctgctgctgctgctgctgtgcgcagctgaaaaataggagttgcaataaagaaccaagttggcatgctgctagtgcttattggggggacatgatgcatttatgctcatcacatgaatctaatgcgcctatccaacagcattgcgtgctgctcttaaatggattttgagctatagtagctgtctaggatgtgccatcgcatttgccttgccttcggataatttactggggcttgcacgtagtagtaagtgcagtaactgggattatttactcttcttgtacgtatctctacttgtactagtactcattcggtagtacaatgtcttaaaaatgggactttcttgattgtcgtggtctttgaccactgcattacgtacgtagaacttgtatttcctgtgtattctaatgtcgatgatgatctcacgctgaacaactctgtgtgccgtagtttgcatccgaatgttgtcagccatgtatttctatggacttttgcattgctagtttcactaaaaaaggtttttaaatatttttctactaggatgatgagcttattaacatgattctgaaagagaaacaagtgtgatgtgtgccggatcctcaatatatactggtttttcgtttgcaggtcactggtgagcctgttggtgaagttagagcggtctctggcatgcacgagaggaaggctgaaatggcccggtttgctgatgcgttcattgcactgcctggtatgataatttagttgctactacgacgtcgtttgcagtgaattttttttgatgctgcatcctaaggatgcaaaatttgacactcttaatttgcgcgacaggcggctacgggactcttgaggagttgcttgaggtcatcacctgggcccaactaggaatccacaagaagccggtaagtaaccaactggttctgattcctctgtatatcttgtactagtaagattcacgaagaaaacgaatggcattattgcgcgataatttggaggccatgtggttgtgcgtgcatgatcccgaattcctttcttgtctctggttgcaattgaggcaaattaataatcgcaaagtcgttggatccattgagatcttgtgctaacatcttgcccttgattatggcttcgtggtgctcccatgtggttggctgaaggttttgccatctagaaaccgaattattgaccaatagtttaagccctctatgatctgcagatcttacagtacattaggcgatagcttggggatcacgagatctgcaccctctattgtttatgcttcctgttaatatgatatatgctttatacttttatgaatgttccaactcatctaatagaatgatgttcgcaggatcttgtacctgtcattttttttaattcaaaaaggaacttatcgtttgcatctatgctaaattaatgacccaatggatctgagcagtgcattaaacctcattcatcatgcctagcaatcagctttgctgatggcccccacaaaattcatatggtgtcgtgtaactgtattaactaggatagtgatccttcttggatccatgtttttagaggaatgctcgtcttttaatcgcgcgggatttcccttattgctctcaaatgcacattctctactcctagctctaacagctcctcaatatttaccaggttggccttctgaatgtcgacgggttttatgatccttttctatccttcattgacatggctgtcagcgaaggattcatagcggaggatgcgcggcgcattatcatctcggctccaactgccagggagctagttctgaagcttgaggtaaaaaaaactcacagcttgcactgttccattttcgacacattgccctacatggcaatttccttctcataacaccaagtttgtatgtacccttttggaaatttcaggagtatgttcccgagtacgaggtcggcttggtttgggacgatcagatgccgcacagcttcgcgcctgacctcgagaccaggatcacctcatcctgatctctcggctctggccctattcttacccaagcttctaaccggcggacgacgataccttcttctcgtgccgaagccgaatatgatcctggaggaagtttgtttttctcagccaggggaaagtaacatccactaaccgaaaagatttagccaaaggcggcccctagctcgggtctgccgatttgttgttttggcaaaatatgtcaattgggacagtatttagcattagcagtgcctcctcaatgctgttcttttggcccccctccctcctcactagctagaagaaggaatatatgtatatgcaagtaatattagtagcatctgtctatcttgatcttctcc</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001049974.1 RefSeq:Os01g0588900]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 1]]
 
[[Category:Chromosome 1]]
 

Latest revision as of 15:02, 20 December 2016

The rice Os01g0588900 was reported as log in 2007 [1] by researchers from the Japan.

Annotated Information

Gene Symbol

  • Os01g0588900 <=> log


Function

  • The LONELY GUY (LOG) gene of rice is required to maintain meristem activity and its loss of function causes premature termination of the shoot meristem. LOG encodes a novel cytokinin-activating enzyme that works in the final step of bioactive cytokinin synthesis.


Expression

  • LOG messenger RNA is specifically localized in shoot meristem tips, indicating the activation of cytokinins in a specific developmental domain


Labs working on this gene

  • Graduate School of Agricultural and Life Sciences, University of Tokyo, Yayoi, Bunkyo, Tokyo 113-8652, Japan.
  • RIKEN Plant Science Center, Tsurumi, Yokohama 230-0045, Japan.
  • Research Institute for Bioresources, Okayama University, Kurashiki, Okayama, 710-0046 Japan.


References

  1. Direct control of shoot meristem activity by a cytokinin-activating enzyme


Structured Information