|
|
| (3 intermediate revisions by 3 users not shown) |
| Line 1: |
Line 1: |
| − | {{JaponicaGene|
| + | The rice '''Os01g0713600''' was reported as ''' OsLFL''' in 2007 <ref name="ref1" /> by researchers from the China. |
| − | GeneName = Os01g0713600|
| + | <br> |
| − | Description = Transcriptional factor B3 family protein|
| + | ==Annotated Information== |
| − | Version = NM_001050588.1 GI:115439546 GeneID:4325939|
| + | ===Gene Symbol=== |
| − | Length = 4788 bp|
| + | *'''Os01g0713600 <=> OsLFL''' |
| − | Definition = Oryza sativa Japonica Group Os01g0713600, complete gene.|
| + | <br> |
| − | Source = Oryza sativa Japonica Group
| + | ===Function=== |
| | + | *'''OsLFL1''', a putative B3 DNA-binding domain-containing transcription factor. |
| | + | <br> |
| | + | ===Mutant=== |
| | + | *Introduction of '''OsLFL1'''-RNAi into mutant W378 successfully down-regulated '''OsLFL1''' expression and restored flowering to almost normal time, indicating that overexpression of '''OsLFL1''' confers late flowering for mutant W378. The flowering-promoting gene Ehd1 and its downstream genes are all down-regulated in W378. Thus, overexpression of '''OsLFL1''' might delay the flowering of W378 by repressing the expression of Ehd1. |
| | + | <br> |
| | | | |
| − | ORGANISM Oryza sativa Japonica Group
| + | ==Labs working on this gene== |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| + | *National Key Laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 300 Fenglin Road, Shanghai 200032, China |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| + | *Graduate School of the Chinese Academy of Sciences, 19 Yuquan Road, Beijing 100039, China |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| + | *The Plant Breeding and Cultivation Research Institute, Shanghai Academy of Agricultural Sciences, |
| − | |
| + | <br> |
| − | Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
| + | ==References== |
| − | AP = Chromosome 1:31393920..31398707|
| + | <references> |
| − | CDS = 31394023..31394196,31395808..31395894,31396503..31396606,31397834..31397880,31397968..31398044<br>,31398124..31398504|
| + | <ref name="ref1"> |
| − | GCID = <gbrowseImage1>
| + | Overexpression of transcription factor OsLFL1 delays flowering time in Oryza sativa |
| − | name=NC_008394:31393920..31398707
| + | </ref> |
| − | source=RiceChromosome01
| + | |
| − | preset=GeneLocation
| + | </references> |
| − | </gbrowseImage1>| | + | <br> |
| − | GSID = <gbrowseImage2>
| + | ==Structured Information== |
| − | name=NC_008394:31393920..31398707 | + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]] |
| − | source=RiceChromosome01
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>| | |
| − | CDNA = <cdnaseq>atggccggggtcaccagcaagcgccgatcctcctccgcctccacctcctcctcctccggcgacggcgccgccgtctccgaccggccgcggggggtgacccggaagcgcaggtccggcggccgttgcccccgccccgccgcctccctgaggccggccgcgccccgaccctcctctcaccacactgctggattgagagtaattctgcaaaaggaactacggtacagcgacgtaagccagctagggagaattgttctcccgaagaaagaggcagaggcttacctaccaattctgacatcaaaggatggcaagaaaagtttatgtatgcatgatttgcaaaatgcacaactctggaccttcaagtacaggtattggcccaacaacaagagcaggatgtatgtacttgagaataccggggattatgtcagaacccatgatcttcaactaggagactccattgtgatatacaaagatgatgagaataaccgatttgtcatcggagcaaagaaggcaggtgatcaacaagctgccactgtgccacaagttgacgagcatatctctaccctcttccccatttttccaattgcacaagtcgatgactatctctctcccatggcaccacaagttgatatctctgccttcgtgccacatgctgatgagaaccatgagatatttgacgggatactgaattctctgccagagataccagtagccaatgtgaggtattctgacttcttcgacccattcgatgatggtatggacatggcaaacactctgaacgccaacgccaaccagtctgctagtctgcatgtcactgatgataagtctgggcattccttgattcccaacccaaagtctgggcctcacatgtga</cdnaseq>|
| |
| − | AA = <aaseq>MAGVTSKRRSSSASTSSSSGDGAAVSDRPRGVTRKRRSGGRCPR PAASLRPAAPRPSSHHTAGLRVILQKELRYSDVSQLGRIVLPKKEAEAYLPILTSKDG KKSLCMHDLQNAQLWTFKYRYWPNNKSRMYVLENTGDYVRTHDLQLGDSIVIYKDDEN NRFVIGAKKAGDQQAATVPQVDEHISTLFPIFPIAQVDDYLSPMAPQVDISAFVPHAD ENHEIFDGILNSLPEIPVANVRYSDFFDPFDDGMDMANTLNANANQSASLHVTDDKSG HSLIPNPKSGPHM</aaseq>|
| |
| − | DNA = <dnaseqindica>104..277#1889..1975#2584..2687#3915..3961#4049..4125#4205..4585#agccgcctccgccgccgcagcgtcctcgcctcctcctcctcctcctcctccaattcctcctcttcctccctccacctcgacctccgccgcccgtcccaccgacatggccggggtcaccagcaagcgccgatcctcctccgcctccacctcctcctcctccggcgacggcgccgccgtctccgaccggccgcggggggtgacccggaagcgcaggtccggcggccgttgcccccgccccgccgcctccctgaggccggccgcgccccgaccctcctctgtgagtgcctcggaattcacggactctcctcctgttccgcggttttgcttggtttctccgtatatgcgtggagatggtgggccgttggtgttgtcggggaggcgccgtgggctggaggcccaggcgagagaggggcgatcgtcggctcgttccactggtcccaacgtcgccggattataaaattttggttggaagaagctcgcagatgtgttgatcttcctgggcgatttggagccctgatttgctcgattggggaaatctgatcaacgaatttcctcgattccagtagctgactcgaataccatgatcagatttgagcgatctatgtgtacggtgtttgatcaatcgacattttttttaggaaaaacttggctctcgtttttgcttcaggcgtgatccgtattgcttaagtcataggttatggcaaggaataattggggcggttctttgtcggattcctgatagcgatagctcgttccagggtagttttttttttttttttgtcagtgatgattagtataagtgtataacatccatgttcctgggtcaatcagagatggatttcgtggtccacgtgccgtgtcacgtgacacatgaatagacgatttgctgtggcgccctgtgggcttaatctttgcccttttcagggtagtaacaatcgcataatcagtggatcgtcttcgtcaatttgttgatttagttatgttaagtattttggggtgttcggtgctctttttgttgtatttatatgttaggaatgctgaaaagttggtagaaattgtcggtatttgtgtatgctctcagcagcttgctgcatcacaaagttggtaggagttggcagtacatgccatgccatgtcaactcgccatggtttgccgtacaagtgaatcttcgatgggaactgatacattctggccagaacatggagcatagaagtgattacattagtcatcacactagctgatacatgaaagtgccagtatagtataaggtttacattttggaccttaggttagttcttgacctctaatgtccaggtaaccctccattttagataaatgcttgtttttgtctccatgttttatgtcaacaactggaccatatgaaatctctacttcttaaaaaaaactgtgggggaattttcttccctgtttgtaaagagcgatgcacgtgcaagaactaggcacaaatcggggatatgtgttcttagtggagtaatttctattactaatggtgggtataactggtgtaggaaggtatggatagtacggtaatgaaatgttagttatacatactgacaaacacttttctgattattttaacctggtcatcatgcaagcaagtgtggtgaaaccatttgcaaatagaaaagggggttgactgtgtatggtccatgaattcaaatctgccacacttcatgtattctgcctaaatggacttcatcttctgatgataggtaaacatgttggatttgaatagagctatccttgattcagatgtaagatttatgcagaaaaccgagtgactatttcttttcttcatggaaaagggcagatttattcgaacgtaattcacatttctgaattgcaagcttctccaatgtttatgtagcaccacactgctggattgagagtaattctgcaaaaggaactacggtacagcgacgtaagccagctagggagaattgttctcccgaaggtctgttctgatgcaaatctatgacatgttccttttttggggggtatttgcttcagtacacctcttaataattatgtgaatctttaatgtctattaatgataaaagtgaaccatcttaatcaagaaccagttaggtgaacatcattggtttttggtggcagcatggatggtaaaatcatgtaggatttctggtggcatccaataagaaaatagagaacaaggatcaaaagtgcaaacattagttcttgaataaaatgagcttctcttgacgtgaatagcatgaatatactggtaaatacttggggatgatgaatctgtaaattagcactacttgtcacagatcaaatgtttgtgctataagcagaaagaatatgctgataagtacttggagatgacagatctatataatattatattccctataggttgacagcattaggtctttgttttaaaccatagagatcaaatctaatttttattcagattcatccctttgttagtaaaactaatgtttcttcatattcacaaactcttcttatataggattactgaagcaaacctgtctttttatacacctgacacttgtctctgatgaatgaattcctcagaaagaggcagaggcttacctaccaattctgacatcaaaggatggcaagaaaagtttatgtatgcatgatttgcaaaatgcacaactctggaccttcaagtacaggttgaacagtttgtctatttggctttaaatttgttgttaccatggcttcctctgccaataaccatctgagtcatactttattttcaatgatgcattaatttcaactttattgtatgtatgaattctcttaacgctttgatattaggttgtttcctcttaatgaaatgtattttctttagtgtgtttgcgcctattttgccatatccaacaagaaattagttcttctatattgggtagactttgaaaaataatacggttgcaacatgtatatggattctgttaggaatgttgttgttttatataccatcctcatctctttgaatttactcacatttatttgttgagctttttatgtccttgggaaggtagcaaacctaactctgtacattttgaatgatggtttttttagataatggaataaaattccagcatttgctcacagagctaaaaccaattattacaaaaattgggaacaaaccgatcacatcacaacgaaatatgaaggacacaaccaaactgatagaggcacacaccagcataaaaaaccacaacttattgaattctatttgtgatcctccagccgaagtttgtgaaaagttacataaccattgactcaagatggcgacatgcaacttttattaacttgatatcttcatcacacttttgtagtggaacctaggaccggaccggccaatatgttgcctgaaaagcacctgcatataaaattcagatggtattttatcaaaaactatatcatttatgctcaactatagagtccaacataaagtagatgctcctacaagaatgagtttttttggtttttttatcaaccctcacaagccaatttccaaaaatatgagaaatactatgaggaatatataaaccagaagaaaactgcgatgctctccaaaggaattttgcatagtgacactccaggaaaagatgatggatagtctcatttttcatgcaaaagcaacatctcatactaccattccaattcctcttaccaaattgttctttgtcaaaaccaccccttttaagttttaacaagtaccacataaaaatcttaatcttaagaggcattttaagtttctagataatcttcaaaaaatgtttttttctgttcactaaaaaatgtccccttttttttctgtttatactaaaaaaattttatttccgcagtaagttgcacatgtatagtgtcacaatgaatcatctcctatacaggtattggcccaacaacaagagcaggatgtatgtacttgagaataccggtgagtacctcatttcatttttttcctttttctgttaaacgttatagaacaatgttcttatattccttccctccttttaaacaccaggggattatgtcagaacccatgatcttcaactaggagactccattgtgatatacaaagatgatgagaataaccgatttgtaatcaccttgtctcataattatttaatcaccctactcttttatgctcattacatatgataatttataacttgtgaaggtcatcggagcaaagaaggcaggtgatcaacaagctgccactgtgccacaagttgacgagcatatctctaccctcttccccatttttccaattgcacaagtcgatgactatctctctcccatggcaccacaagttgatatctctgccttcgtgccacatgctgatgagaaccatgagatatttgacgggatactgaattctctgccagagataccagtagccaatgtgaggtattctgacttcttcgacccattcgatgatggtatggacatggcaaacactctgaacgccaacgccaaccagtctgctagtctgcatgtcactgatgataagtctgggcattccttgattcccaacccaaagtctgggcctcacatgtgagactgacagggaagtggtatttcataccatggtcagtttgtatgaagctcagaaaccccttccctggcgccattgttgtacatccaaataattggtgtccttattttgacgctgtatatgctaactgctacatgcagttttatgtgtaaaatattttgttcacaacccaactggaggtttaatcagatgaaacattgtaactc</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001050588.1 RefSeq:Os01g0713600]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 1]]
| |
| − | [[Category:Chromosome 1]]
| |