Difference between revisions of "Os01g0713600"

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(Created page with "{{JaponicaGene| GeneName = Os01g0713600| Description = Transcriptional factor B3 family protein| Version = NM_001050588.1 GI:115439546 GeneID:4325939| Length = 4788 bp| D...")
 
(Annotated Information)
 
(3 intermediate revisions by 3 users not shown)
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{{JaponicaGene|
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The rice '''Os01g0713600''' was reported as ''' OsLFL''' in 2007 <ref name="ref1" /> by researchers from the China.
GeneName = Os01g0713600|
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<br>
Description = Transcriptional factor B3 family protein|
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==Annotated Information==
Version = NM_001050588.1 GI:115439546 GeneID:4325939|
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===Gene Symbol===
Length = 4788 bp|
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*'''Os01g0713600 <=> OsLFL'''
Definition = Oryza sativa Japonica Group Os01g0713600, complete gene.|
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<br>
Source = Oryza sativa Japonica Group
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===Function===
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*'''OsLFL1''', a putative B3 DNA-binding domain-containing transcription factor.
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<br>
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===Mutant===
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*Introduction of '''OsLFL1'''-RNAi into mutant W378 successfully down-regulated '''OsLFL1''' expression and restored flowering to almost normal time, indicating that overexpression of '''OsLFL1''' confers late flowering for mutant W378. The flowering-promoting gene Ehd1 and its downstream genes are all down-regulated in W378. Thus, overexpression of '''OsLFL1''' might delay the flowering of W378 by repressing the expression of Ehd1.
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<br>
  
  ORGANISM  Oryza sativa Japonica Group
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==Labs working on this gene==
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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*National Key Laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 300 Fenglin Road, Shanghai 200032, China
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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*Graduate School of the Chinese Academy of Sciences, 19 Yuquan Road, Beijing 100039, China
            clade; Ehrhartoideae; Oryzeae; Oryza.
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*The Plant Breeding and Cultivation Research Institute, Shanghai Academy of Agricultural Sciences,
|
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<br>
Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
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==References==
AP = Chromosome 1:31393920..31398707|
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<references>
CDS = 31394023..31394196,31395808..31395894,31396503..31396606,31397834..31397880,31397968..31398044<br>,31398124..31398504|
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<ref name="ref1">
GCID = <gbrowseImage1>
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Overexpression of transcription factor OsLFL1 delays flowering time in Oryza sativa
name=NC_008394:31393920..31398707
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</ref>
source=RiceChromosome01
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preset=GeneLocation
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</references>
</gbrowseImage1>|
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<br>
GSID = <gbrowseImage2>
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==Structured Information==
name=NC_008394:31393920..31398707
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]]
source=RiceChromosome01
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>atggccggggtcaccagcaagcgccgatcctcctccgcctccacctcctcctcctccggcgacggcgccgccgtctccgaccggccgcggggggtgacccggaagcgcaggtccggcggccgttgcccccgccccgccgcctccctgaggccggccgcgccccgaccctcctctcaccacactgctggattgagagtaattctgcaaaaggaactacggtacagcgacgtaagccagctagggagaattgttctcccgaagaaagaggcagaggcttacctaccaattctgacatcaaaggatggcaagaaaagtttatgtatgcatgatttgcaaaatgcacaactctggaccttcaagtacaggtattggcccaacaacaagagcaggatgtatgtacttgagaataccggggattatgtcagaacccatgatcttcaactaggagactccattgtgatatacaaagatgatgagaataaccgatttgtcatcggagcaaagaaggcaggtgatcaacaagctgccactgtgccacaagttgacgagcatatctctaccctcttccccatttttccaattgcacaagtcgatgactatctctctcccatggcaccacaagttgatatctctgccttcgtgccacatgctgatgagaaccatgagatatttgacgggatactgaattctctgccagagataccagtagccaatgtgaggtattctgacttcttcgacccattcgatgatggtatggacatggcaaacactctgaacgccaacgccaaccagtctgctagtctgcatgtcactgatgataagtctgggcattccttgattcccaacccaaagtctgggcctcacatgtga</cdnaseq>|
 
AA = <aaseq>MAGVTSKRRSSSASTSSSSGDGAAVSDRPRGVTRKRRSGGRCPR                    PAASLRPAAPRPSSHHTAGLRVILQKELRYSDVSQLGRIVLPKKEAEAYLPILTSKDG                    KKSLCMHDLQNAQLWTFKYRYWPNNKSRMYVLENTGDYVRTHDLQLGDSIVIYKDDEN                    NRFVIGAKKAGDQQAATVPQVDEHISTLFPIFPIAQVDDYLSPMAPQVDISAFVPHAD                    ENHEIFDGILNSLPEIPVANVRYSDFFDPFDDGMDMANTLNANANQSASLHVTDDKSG                    HSLIPNPKSGPHM</aaseq>|
 
DNA = <dnaseqindica>104..277#1889..1975#2584..2687#3915..3961#4049..4125#4205..4585#agccgcctccgccgccgcagcgtcctcgcctcctcctcctcctcctcctccaattcctcctcttcctccctccacctcgacctccgccgcccgtcccaccgacatggccggggtcaccagcaagcgccgatcctcctccgcctccacctcctcctcctccggcgacggcgccgccgtctccgaccggccgcggggggtgacccggaagcgcaggtccggcggccgttgcccccgccccgccgcctccctgaggccggccgcgccccgaccctcctctgtgagtgcctcggaattcacggactctcctcctgttccgcggttttgcttggtttctccgtatatgcgtggagatggtgggccgttggtgttgtcggggaggcgccgtgggctggaggcccaggcgagagaggggcgatcgtcggctcgttccactggtcccaacgtcgccggattataaaattttggttggaagaagctcgcagatgtgttgatcttcctgggcgatttggagccctgatttgctcgattggggaaatctgatcaacgaatttcctcgattccagtagctgactcgaataccatgatcagatttgagcgatctatgtgtacggtgtttgatcaatcgacattttttttaggaaaaacttggctctcgtttttgcttcaggcgtgatccgtattgcttaagtcataggttatggcaaggaataattggggcggttctttgtcggattcctgatagcgatagctcgttccagggtagttttttttttttttttgtcagtgatgattagtataagtgtataacatccatgttcctgggtcaatcagagatggatttcgtggtccacgtgccgtgtcacgtgacacatgaatagacgatttgctgtggcgccctgtgggcttaatctttgcccttttcagggtagtaacaatcgcataatcagtggatcgtcttcgtcaatttgttgatttagttatgttaagtattttggggtgttcggtgctctttttgttgtatttatatgttaggaatgctgaaaagttggtagaaattgtcggtatttgtgtatgctctcagcagcttgctgcatcacaaagttggtaggagttggcagtacatgccatgccatgtcaactcgccatggtttgccgtacaagtgaatcttcgatgggaactgatacattctggccagaacatggagcatagaagtgattacattagtcatcacactagctgatacatgaaagtgccagtatagtataaggtttacattttggaccttaggttagttcttgacctctaatgtccaggtaaccctccattttagataaatgcttgtttttgtctccatgttttatgtcaacaactggaccatatgaaatctctacttcttaaaaaaaactgtgggggaattttcttccctgtttgtaaagagcgatgcacgtgcaagaactaggcacaaatcggggatatgtgttcttagtggagtaatttctattactaatggtgggtataactggtgtaggaaggtatggatagtacggtaatgaaatgttagttatacatactgacaaacacttttctgattattttaacctggtcatcatgcaagcaagtgtggtgaaaccatttgcaaatagaaaagggggttgactgtgtatggtccatgaattcaaatctgccacacttcatgtattctgcctaaatggacttcatcttctgatgataggtaaacatgttggatttgaatagagctatccttgattcagatgtaagatttatgcagaaaaccgagtgactatttcttttcttcatggaaaagggcagatttattcgaacgtaattcacatttctgaattgcaagcttctccaatgtttatgtagcaccacactgctggattgagagtaattctgcaaaaggaactacggtacagcgacgtaagccagctagggagaattgttctcccgaaggtctgttctgatgcaaatctatgacatgttccttttttggggggtatttgcttcagtacacctcttaataattatgtgaatctttaatgtctattaatgataaaagtgaaccatcttaatcaagaaccagttaggtgaacatcattggtttttggtggcagcatggatggtaaaatcatgtaggatttctggtggcatccaataagaaaatagagaacaaggatcaaaagtgcaaacattagttcttgaataaaatgagcttctcttgacgtgaatagcatgaatatactggtaaatacttggggatgatgaatctgtaaattagcactacttgtcacagatcaaatgtttgtgctataagcagaaagaatatgctgataagtacttggagatgacagatctatataatattatattccctataggttgacagcattaggtctttgttttaaaccatagagatcaaatctaatttttattcagattcatccctttgttagtaaaactaatgtttcttcatattcacaaactcttcttatataggattactgaagcaaacctgtctttttatacacctgacacttgtctctgatgaatgaattcctcagaaagaggcagaggcttacctaccaattctgacatcaaaggatggcaagaaaagtttatgtatgcatgatttgcaaaatgcacaactctggaccttcaagtacaggttgaacagtttgtctatttggctttaaatttgttgttaccatggcttcctctgccaataaccatctgagtcatactttattttcaatgatgcattaatttcaactttattgtatgtatgaattctcttaacgctttgatattaggttgtttcctcttaatgaaatgtattttctttagtgtgtttgcgcctattttgccatatccaacaagaaattagttcttctatattgggtagactttgaaaaataatacggttgcaacatgtatatggattctgttaggaatgttgttgttttatataccatcctcatctctttgaatttactcacatttatttgttgagctttttatgtccttgggaaggtagcaaacctaactctgtacattttgaatgatggtttttttagataatggaataaaattccagcatttgctcacagagctaaaaccaattattacaaaaattgggaacaaaccgatcacatcacaacgaaatatgaaggacacaaccaaactgatagaggcacacaccagcataaaaaaccacaacttattgaattctatttgtgatcctccagccgaagtttgtgaaaagttacataaccattgactcaagatggcgacatgcaacttttattaacttgatatcttcatcacacttttgtagtggaacctaggaccggaccggccaatatgttgcctgaaaagcacctgcatataaaattcagatggtattttatcaaaaactatatcatttatgctcaactatagagtccaacataaagtagatgctcctacaagaatgagtttttttggtttttttatcaaccctcacaagccaatttccaaaaatatgagaaatactatgaggaatatataaaccagaagaaaactgcgatgctctccaaaggaattttgcatagtgacactccaggaaaagatgatggatagtctcatttttcatgcaaaagcaacatctcatactaccattccaattcctcttaccaaattgttctttgtcaaaaccaccccttttaagttttaacaagtaccacataaaaatcttaatcttaagaggcattttaagtttctagataatcttcaaaaaatgtttttttctgttcactaaaaaatgtccccttttttttctgtttatactaaaaaaattttatttccgcagtaagttgcacatgtatagtgtcacaatgaatcatctcctatacaggtattggcccaacaacaagagcaggatgtatgtacttgagaataccggtgagtacctcatttcatttttttcctttttctgttaaacgttatagaacaatgttcttatattccttccctccttttaaacaccaggggattatgtcagaacccatgatcttcaactaggagactccattgtgatatacaaagatgatgagaataaccgatttgtaatcaccttgtctcataattatttaatcaccctactcttttatgctcattacatatgataatttataacttgtgaaggtcatcggagcaaagaaggcaggtgatcaacaagctgccactgtgccacaagttgacgagcatatctctaccctcttccccatttttccaattgcacaagtcgatgactatctctctcccatggcaccacaagttgatatctctgccttcgtgccacatgctgatgagaaccatgagatatttgacgggatactgaattctctgccagagataccagtagccaatgtgaggtattctgacttcttcgacccattcgatgatggtatggacatggcaaacactctgaacgccaacgccaaccagtctgctagtctgcatgtcactgatgataagtctgggcattccttgattcccaacccaaagtctgggcctcacatgtgagactgacagggaagtggtatttcataccatggtcagtttgtatgaagctcagaaaccccttccctggcgccattgttgtacatccaaataattggtgtccttattttgacgctgtatatgctaactgctacatgcagttttatgtgtaaaatattttgttcacaacccaactggaggtttaatcagatgaaacattgtaactc</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001050588.1 RefSeq:Os01g0713600]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 1]]
 
[[Category:Chromosome 1]]
 

Latest revision as of 16:15, 20 December 2016

The rice Os01g0713600 was reported as OsLFL in 2007 [1] by researchers from the China.

Annotated Information

Gene Symbol

  • Os01g0713600 <=> OsLFL


Function

  • OsLFL1, a putative B3 DNA-binding domain-containing transcription factor.


Mutant

  • Introduction of OsLFL1-RNAi into mutant W378 successfully down-regulated OsLFL1 expression and restored flowering to almost normal time, indicating that overexpression of OsLFL1 confers late flowering for mutant W378. The flowering-promoting gene Ehd1 and its downstream genes are all down-regulated in W378. Thus, overexpression of OsLFL1 might delay the flowering of W378 by repressing the expression of Ehd1.


Labs working on this gene

  • National Key Laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 300 Fenglin Road, Shanghai 200032, China
  • Graduate School of the Chinese Academy of Sciences, 19 Yuquan Road, Beijing 100039, China
  • The Plant Breeding and Cultivation Research Institute, Shanghai Academy of Agricultural Sciences,


References

  1. Overexpression of transcription factor OsLFL1 delays flowering time in Oryza sativa


Structured Information