Difference between revisions of "Os03g0319300"

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(Created page with "{{JaponicaGene| GeneName = Os03g0319300| Description = Calmodulin (CaM)| Version = NM_001056483.1 GI:115452694 GeneID:4332664| Length = 1778 bp| Definition = Oryza sativa...")
 
(→‎Labs working on this gene)
 
(4 intermediate revisions by 3 users not shown)
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{{JaponicaGene|
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The rice '''''Os03g0319300''''' was reported as '''''OsCam1-1''''' in 2012 <ref name="ref1" /> by researchers from Thailand.  
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GeneName = Os03g0319300|
 
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Description = Calmodulin (CaM)|
 
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Version = NM_001056483.1 GI:115452694 GeneID:4332664|
 
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Length = 1778 bp|
 
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Definition = Oryza sativa Japonica Group Os03g0319300, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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[[File:212-Os03g0319300-1.png|right|thumb|227px|'''Figure 8.''' ''The phenotype comparison of (i) wild type (KDML-wt) rice cultivar, the three transgenic rice lines, (ii) CaM1-1T1, (iii) CaM1-1T2 and (iv) CaM1-1T3, and (v) the control KDML-vector (T1) line, all grown under (A) normal or (B) salt-stress conditions for 15 d.<ref name="ref1" />.'']]
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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===Gene Symbol===
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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*'''''Os03g0319300''''' '''''<=>''''' '''''OsCam1-1''''','''''OsCaM1''''','''''CAM3''''','''''OsCaM1-1'''''
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|
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===Function===
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Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
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* '''''OsCam1-1''''' signaling is likely to play an important role in ABA biosynthesis.
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AP = Chromosome 3:11573343..11575120|
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* The level of '''''OsCam1-1''''' gene expression and ABA accumulation probably contribute to salt resistance in rice.
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CDS = 11573474..11573549,11574380..11574753|
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GCID = <gbrowseImage1>
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===Phenotypic analysis===
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name=NC_008396:11573343..11575120
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* Transgenic plants over-expressing OsCam1-1 were more tolerant to salt stress, with, for example, a better ability to maintain their shoot and root mass (as dry weight) during salt stress, than the control plants.
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source=RiceChromosome03
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preset=GeneLocation
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You can also add sub-section(s) at will.
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</gbrowseImage1>|
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GSID = <gbrowseImage2>
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==Labs working on this gene==
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name=NC_008396:11573343..11575120
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* Biological Sciences Program, Faculty of Science, Chulalongkorn University, 254 Phayathai Road, Bangkok 10330, Thailand
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source=RiceChromosome03
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* Environment and Plant Physiology Research Unit, Department of Botany, Faculty of Science, Chulalongkorn University, 254 Phayathai Road, Bangkok 10330, Thailand
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preset=GeneLocation
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* Department of Biochemistry, Faculty of Science, Chulalongkorn University, 254 Phayathai Road, Bangkok 10330, Thailand
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</gbrowseImage2>|
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CDNA = <cdnaseq>atggcggaccagctcaccgacgaccagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggcgatggttgcatcacaaccaaggagctgggaaccgtgatgcgttcgctggggcagaacccaacggaggccgagctccaggacatgatcaacgaggtcgacgcggacggcaacggcaccatcgacttcccggagttcctcaacctgatggcacgcaagatgaaggacaccgactcggaggaggagctcaaggaggcgttcagggtgttcgacaaagaccagaacggcttcatctccgccgccgagctccgccacgtcatgaccaacctcggcgagaagctgaccgacgaggaggtcgacgagatgatccgcgaagccgacgtcgacggtgacggccagatcaactacgaggagttcgtcaaggtcatgatggccaagtga</cdnaseq>|
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==References==
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AA = <aaseq>MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP                    TEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFIS                    AAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK</aaseq>|
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<references>
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DNA = <dnaseqindica>132..207#1038..1411#acagatcgctcccagccattctctccgcgacggtctcgtcttccccacccctcgcctcctcgcgcgctcggtgagagaagcgaagaagaagaagaagaggaggaggaagaagccaggctaagcccagcggcatggcggaccagctcaccgacgaccagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggcgatggtaaaagaacaccctctcctcatccctgttcttgcagcttgctgttattctggatatccatgtcgttgtagcagaatattttgggcgttcttcgctaaccgctcgaattttgcatcgctgtcttacactgtgcgcactacataatgtgaagatctcgtgttacgcttaatctggaaaatttactccgagaattttaccgagctgtagagcttattgggttagattaattagtggcttcccttaaagatgaaactgcaactgttgcgatgcgccgcagcggcttggcatgtctcgagatggggacctttgtgttcctctgcttttgccattggatcgcggatccggatgccttagatccgatcccagcgtgcacaaaattttgacacgttgagaactagaaatagtgtagtttcaggatgattatagcagatggatggtagactaatagatccaaagatctttagcaacggagattaagaactattttcagagtttacgtgttcatagcagtatttgccatgattattatatatagattgcattttgatgttcatctgaattatgctctgtgaaaagcatgaatttgtaaggattacgtggtttgtttacattgggcatgttgcataaaacctggatgatcatggcttagttgtcaagctcgacataataatttatcggatcgggtgcagcttgatctgttcctacatgtctttgatgtagctggctgttagttgtttgctttagttgaaagcatgtgctaactaatggaatagtcactagtagcaatgtgaagatgatctgaaatctgtccgtgatgtcacatttggcaggttgcatcacaaccaaggagctgggaaccgtgatgcgttcgctggggcagaacccaacggaggccgagctccaggacatgatcaacgaggtcgacgcggacggcaacggcaccatcgacttcccggagttcctcaacctgatggcacgcaagatgaaggacaccgactcggaggaggagctcaaggaggcgttcagggtgttcgacaaagaccagaacggcttcatctccgccgccgagctccgccacgtcatgaccaacctcggcgagaagctgaccgacgaggaggtcgacgagatgatccgcgaagccgacgtcgacggtgacggccagatcaactacgaggagttcgtcaaggtcatgatggccaagtgaggcaccacttcccctgccgatgatggcatagtaccctgggaggaggaaaccgtgcattgccgtattagtaaggggatgcaaacactggtttcagtcgtcttccctgatgaagaaaaccgaaccgtactagttgtagttgctgaacatttttctatctctccagtctctccggtgtgccatggaacttcttgcttgatttttctgtgtgaatctgttaaggcttgctctgatctctccgaaccctgaattgcattgcagttgagtcccgtctttttgtagcactgtttttcttttccgtcagatctgatcggatcatttttagcatcatccatcaatgaacaggcagttgctttccgttgccgttatc</dnaseqindica>|
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* <ref name="ref1">
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001056483.1 RefSeq:Os03g0319300]|
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Saeng-ngam, S., Takpirom, W., Buaboocha, T. and Chadchawan, S., 2012. The role of the OsCam1-1 salt stress sensor in ABA accumulation and salt tolerance in rice. Journal of Plant Biology, 55(3), pp.198-208.
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}}
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</ref>
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[[Category:Genes]]
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</references>
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[[Category:Japonica mRNA]]
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[[Category:Oryza Sativa Japonica Group]]
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==Structured Information==
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[[Category:Japonica Genes]]
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 3]]
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[[Category:Japonica Chromosome 3]]
 
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[[Category:Chromosome 3]]
 

Latest revision as of 01:30, 14 February 2017

The rice Os03g0319300 was reported as OsCam1-1 in 2012 [1] by researchers from Thailand.

Annotated Information

Figure 8. The phenotype comparison of (i) wild type (KDML-wt) rice cultivar, the three transgenic rice lines, (ii) CaM1-1T1, (iii) CaM1-1T2 and (iv) CaM1-1T3, and (v) the control KDML-vector (T1) line, all grown under (A) normal or (B) salt-stress conditions for 15 d.[1].

Gene Symbol

  • Os03g0319300 <=> OsCam1-1,OsCaM1,CAM3,OsCaM1-1

Function

  • OsCam1-1 signaling is likely to play an important role in ABA biosynthesis.
  • The level of OsCam1-1 gene expression and ABA accumulation probably contribute to salt resistance in rice.

Phenotypic analysis

  • Transgenic plants over-expressing OsCam1-1 were more tolerant to salt stress, with, for example, a better ability to maintain their shoot and root mass (as dry weight) during salt stress, than the control plants.

You can also add sub-section(s) at will.

Labs working on this gene

  • Biological Sciences Program, Faculty of Science, Chulalongkorn University, 254 Phayathai Road, Bangkok 10330, Thailand
  • Environment and Plant Physiology Research Unit, Department of Botany, Faculty of Science, Chulalongkorn University, 254 Phayathai Road, Bangkok 10330, Thailand
  • Department of Biochemistry, Faculty of Science, Chulalongkorn University, 254 Phayathai Road, Bangkok 10330, Thailand

References

  1. ↑ 1.0 1.1 Saeng-ngam, S., Takpirom, W., Buaboocha, T. and Chadchawan, S., 2012. The role of the OsCam1-1 salt stress sensor in ABA accumulation and salt tolerance in rice. Journal of Plant Biology, 55(3), pp.198-208.

Structured Information

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os03g0319300&oldid=276194"