Difference between revisions of "Os03g0717700"

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(Created page with "{{JaponicaGene| GeneName = Os03g0717700| Description = Response regulator receiver domain containing protein| Version = NM_001057618.1 GI:115454964 GeneID:4333916| Length ...")
 
 
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{{JaponicaGene|
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The rice '''''Os03g0717700''''' was reported as '''''OsHk4''''' in 2012 <ref name="ref1" /> by researchers from Korea.  
GeneName = Os03g0717700|
 
Description = Response regulator receiver domain containing protein|
 
Version = NM_001057618.1 GI:115454964 GeneID:4333916|
 
Length = 2482 bp|
 
Definition = Oryza sativa Japonica Group Os03g0717700, complete gene.|
 
Source = Oryza sativa Japonica Group
 
  
  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Gene Symbol===
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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*'''''Os03g0717700''''' '''''<=>''''' '''''OsHk4''''','''''HK4'''','''''Ohk4''''','''''HISTIDINE KINASE 4'''''
            clade; Ehrhartoideae; Oryzeae; Oryza.
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===Function===
|
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* '''''OsHk4''''' and '''''OsHk6''''' mediated the canonical two-component signaling cascade of Arabidopsis to induce phosphorylation of ARR2.
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
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* The action mechanism of '''''OsHks''''' is evolutionarily diverged from bacterial histidine kinases.
AP = Chromosome 3:29816512..29818993|
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* '''''OsHks''''' are homomeric cytokinin receptors with distinctive cytokinin preferences in rice.
CDS = 29817060..29817553,29818174..29818432|
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GCID = <gbrowseImage1>
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===Expression===
name=NC_008396:29816512..29818993
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* '''''OsHk4''''' and '''''OsHk6''''' were highly expressed in spike- lets, suggesting that tZ and iP might play key roles in grain development.
source=RiceChromosome03
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You can also add sub-section(s) at will.
preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
GSID = <gbrowseImage2>
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* Department of Life Sciences and Functional Genomics Center, Pohang University of Science and Technology, Pohang 790-784,
name=NC_008396:29816512..29818993
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* Korea Crop Biotech Institute, Kyung Hee University, Youngin 446-701, Korea
source=RiceChromosome03
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* Department of Plant Molecular Systems Biotechnology, Kyung Hee University, Youngin 446-701, Korea
preset=GeneLocation
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</gbrowseImage2>|
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==References==
CDNA = <cdnaseq>atgttgctaatcgagagtgattcctggggaccacagatggatgtctccttacatgctagacttcaggagatgaaacagagtgatcgcatacatgtattgcccaaggttttccttctttctgctgcagaatcagacaaagtaaagaagatacatgcagttgattctgtgataccaaagcctctgaaagcaagtgcacttgcggcctgtctgttccaagcacttggtatcacacagccgagccatgagaaacgtgacgattcaggttctcttcatgggcgtgatggttcaggttctcttcatgggttgcttcttggcaagaacatattggtagttgatgacaacaaggtaaacctcagagtggccgctggtacattgaagaaatatggggcaaaggtggagtgtgtggagagtggaaaagatgctctttcccttctacaagtgccgcacaagtttgatctgtgtctcatggacattcagatgccggagatggatggatttgaggcaactcggcaaatacgagcaatggaagggaaggcaaatgagcaggcagacgacagcgaatcgggttcagaaatcgcagcaaagacggccaaatggcacttgccaatcctggcaatgaccgctgatgtcatccaggccacccacgaggaatgcacaaagtgcgggatggatggctacgtctcgaagccctttgaggagaagcagctcttccaggcagtacagaagttcttgggcccatgcgtttccagctga</cdnaseq>|
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<references>
AA = <aaseq>MLLIESDSWGPQMDVSLHARLQEMKQSDRIHVLPKVFLLSAAES                    DKVKKIHAVDSVIPKPLKASALAACLFQALGITQPSHEKRDDSGSLHGRDGSGSLHGL                    LLGKNILVVDDNKVNLRVAAGTLKKYGAKVECVESGKDALSLLQVPHKFDLCLMDIQM                    PEMDGFEATRQIRAMEGKANEQADDSESGSEIAAKTAKWHLPILAMTADVIQATHEEC                    TKCGMDGYVSKPFEEKQLFQAVQKFLGPCVSS</aaseq>|
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* <ref name="ref1">
DNA = <dnaseqindica>549..1042#1663..1921#aaaggcttggaatcacttctgaagttgttggtaccattgatccgacatttggtgtgttgtctgggagaaatggcagttctctaaccaggtacttctatcttctacattcctttcaaaaaattgaaatcctggagttaataggctacttttctctggaaattagaataaacggagcatgcttgcatactaacttcttatgcaaatatcactgttctatgtataaatgattacacgataatgattgttttttggtaagtattactgggtaatacttggccatcatagttcttgcctttattttgtatcacttcggtatattgctacttctgcggcagttctctttacgctaccgaatgtgatatatttaattgaaaattgattttattttaatctgtgaaaagaacatttttttaaggccccacaattctcaaataactagtaagctgattgcagatgatatttgaactatcttgacacccagtttttttttttaatctaactcgttttgttccaaatttgttgtcagcattggtaagaagcagccatgcatgttgctaatcgagagtgattcctggggaccacagatggatgtctccttacatgctagacttcaggagatgaaacagagtgatcgcatacatgtattgcccaaggttttccttctttctgctgcagaatcagacaaagtaaagaagatacatgcagttgattctgtgataccaaagcctctgaaagcaagtgcacttgcggcctgtctgttccaagcacttggtatcacacagccgagccatgagaaacgtgacgattcaggttctcttcatgggcgtgatggttcaggttctcttcatgggttgcttcttggcaagaacatattggtagttgatgacaacaaggtaaacctcagagtggccgctggtacattgaagaaatatggggcaaaggtggagtgtgtggagagtggaaaagatgctctttcccttctacaagtgccgcacaagtttgatctgtgtctcatggacattcagatgccggagatggatgggtaagcttatgtcccgttcaagatttatttcttttgaatttgagccttttatttcatatgatccaaagcgtgacatgtcatctggataagtgccacctcgttgactatcaatttattcacgcaatgaatcaggctttctgcctctttttgaagaaaaaaaaaatgttattcacacttcgtggttaatggaaacaagcatatacattgctgacgccaaatactgattataactagtaaaaatgtcagtcttgtgttagttttttatgtgcgaaaaatgccgtgtctaattcattatgtgaaaattttcaaagacattagccctgatatcgtcctgcattatgccaaacagtactttaaatattaatatcagaaggtctaaaatccgtgcagttaccatttgttcattgtagttttaaccatcatactgcaatatgcagttcttgggctaatgaacataatggtgtgctaacaccctcatgaccaattaacttatgtctcttgaacacttgctgcatattgacatctctgttcctatattttctgaatagtaaccaagtaatgtcaaaccatgtcattattttgtcttcgtttaatcaacatagttttgcttcatgtgctagatttgaggcaactcggcaaatacgagcaatggaagggaaggcaaatgagcaggcagacgacagcgaatcgggttcagaaatcgcagcaaagacggccaaatggcacttgccaatcctggcaatgaccgctgatgtcatccaggccacccacgaggaatgcacaaagtgcgggatggatggctacgtctcgaagccctttgaggagaagcagctcttccaggcagtacagaagttcttgggcccatgcgtttccagctgacaccaaccgatgcattctgctgtacaccaagagagtaaagaatgagcactgactgtgaactgaggcggctaaaattcttctccattttgttgctcttcaacagaggatgcgatctgaatgagagcctgcactcaaggcgacattgcacagaaaggatcggagccttcattgtgtacatgtatttttatcggcagagaccaagagctatagttttaagctaggagaagcataagttttagggtgacatgtccggcctcctgttatcggagccacaggtgtgttgctgggctattggaatcttgagcaatttttttttcctgtacagctcccacgatttttcggctccagcccactgttgacagaagacatgtttgcagggtgcagcatcttggaaaaacctgataacctgagaattttttgttgtgtcattctgtgtgcagtatattagaatttgagcagtattgtatatcaatgtaccatcggtgtatggatgtgaacaaggaaggcgaaacctgtgattaggacactgattaaaacttgcactcgttttttccatcccgt</dnaseqindica>|
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Choi J, Lee J, Kim K, Cho M, Ryu H, An G, Hwang I. Functional identification
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057618.1 RefSeq:Os03g0717700]|
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of OsHk6 as a homotypic cytokinin receptor in rice with preferential affinity for
}}
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iP. Plant Cell Physiol. 2012 Jul;53(7):1334-43. doi: 10.1093/pcp/pcs079. PubMed
[[Category:Genes]]
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PMID: 22642989.
[[Category:Japonica mRNA]]
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</ref>
[[Category:Oryza Sativa Japonica Group]]
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</references>
[[Category:Japonica Genes]]
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[[Category:Japonica Chromosome 3]]
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==Structured Information==
[[Category:Chromosome 3]]
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 3]]

Latest revision as of 02:56, 14 February 2017

The rice Os03g0717700 was reported as OsHk4 in 2012 [1] by researchers from Korea.

Annotated Information

Gene Symbol

  • Os03g0717700 <=> OsHk4,HK4',Ohk4,HISTIDINE KINASE 4

Function

  • OsHk4 and OsHk6 mediated the canonical two-component signaling cascade of Arabidopsis to induce phosphorylation of ARR2.
  • The action mechanism of OsHks is evolutionarily diverged from bacterial histidine kinases.
  • OsHks are homomeric cytokinin receptors with distinctive cytokinin preferences in rice.

Expression

  • OsHk4 and OsHk6 were highly expressed in spike- lets, suggesting that tZ and iP might play key roles in grain development.

You can also add sub-section(s) at will.

Labs working on this gene

  • Department of Life Sciences and Functional Genomics Center, Pohang University of Science and Technology, Pohang 790-784,
  • Korea Crop Biotech Institute, Kyung Hee University, Youngin 446-701, Korea
  • Department of Plant Molecular Systems Biotechnology, Kyung Hee University, Youngin 446-701, Korea

References

  1. Choi J, Lee J, Kim K, Cho M, Ryu H, An G, Hwang I. Functional identification of OsHk6 as a homotypic cytokinin receptor in rice with preferential affinity for iP. Plant Cell Physiol. 2012 Jul;53(7):1334-43. doi: 10.1093/pcp/pcs079. PubMed PMID: 22642989.

Structured Information