Difference between revisions of "Os10g0471700"

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(Created page with "{{JaponicaGene| GeneName = Os10g0471700| Description = Similar to Cyclin-dependent kinase inhibitor 7| Version = NM_001071364.1 GI:115482471 GeneID:4348872| Length = 3340 ...")
 
(Labs working on this gene)
 
(5 intermediate revisions by 3 users not shown)
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{{JaponicaGene|
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The rice '''''Os10g0471700''''' was reported as '''''OsiICK6''''' in 2011 <ref name="ref1" /> by researchers from China.  
GeneName = Os10g0471700|
 
Description = Similar to Cyclin-dependent kinase inhibitor 7|
 
Version = NM_001071364.1 GI:115482471 GeneID:4348872|
 
Length = 3340 bp|
 
Definition = Oryza sativa Japonica Group Os10g0471700, complete gene.|
 
Source = Oryza sativa Japonica Group
 
  
  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Gene Symbol===
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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*'''''Os10g0471700''''' '''''<=>''''' '''''OsiICK6,iICK6'''''
            clade; Ehrhartoideae; Oryzeae; Oryza.
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===Function===
|
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* The significant changes displayed by the transgenic rice plants over-expressing OsiICK6 demonstrate that alterations in the expression of a CDK inhibitor can significantly affect plant growth and development in rice.
Chromosome = [[:category:Japonica Chromosome 10|Chromosome 10]]|
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AP = Chromosome 10:17957058..17960397|
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===Phenotypic analysis===
CDS = 17957371..17957437,17957584..17957787,17959957..17960270|
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* Over-expression of OsiICK6 resulted in multiple phenotypic effects on plant growth, morphology, pollen viability and seed setting.  
GCID = <gbrowseImage1>
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* In OsiICK6-over-expressing plants, leaves rolled toward the abaxial side, suggesting that cell proliferation is critical in maintaining an even growth along the dorsal–ventral plane of leaf blades.
name=NC_008403:17957058..17960397
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source=RiceChromosome10
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===Subcellular localization===
preset=GeneLocation
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* '''''OsiICK6''''' were localized in the nucleus of tobacco leaf cells
</gbrowseImage1>|
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GSID = <gbrowseImage2>
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You can also add sub-section(s) at will.
name=NC_008403:17957058..17960397
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source=RiceChromosome10
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==Labs working on this gene==
preset=GeneLocation
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* Institute of Crop Science, College of Agriculture and Biotechnology, Zhejiang University, Kaixuan Road 268,
</gbrowseImage2>|
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Hangzhou 310029, China
CDNA = <cdnaseq>atgggcaagtacatgcgcaaggccaaggtggtggtctccggcgaggtggtggccgccgccgtcatggagctcgccgcggcgccgctcggggtgcgcacccgcgcccgctccctcgcgctgcagaagaggcagggcggggagtacctcgagctcaggagccgcaggctcgagaagctccctcctcccccgccgccgccgccgaggaggagggcgacggctgcggctgcgactgctgatgcgacggcggcggagagcgcggaggcggaggtgtcgttcgggggggagaacgtcctcgagctggaggccatggaaaggaataccagggagacgacaccttgcagcttgatcagggaccccgatacgattagcacccctggatctaccacaaggcgcagccactcgagttctcattgcaaggtgcaaacacccgtgcgccacaacattattccagcatcagcagagctggaagcgttcttcgctgccgaagagcaacggcaacgacaggctttcatcgacaagtataactttgatcctgtgaatgactgccctcttcccggccggtttgaatgggtcaagctagactga</cdnaseq>|
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* Department of Biochemistry, University
AA = <aaseq>MGKYMRKAKVVVSGEVVAAAVMELAAAPLGVRTRARSLALQKRQ                    GGEYLELRSRRLEKLPPPPPPPPRRRATAAAATADATAAESAEAEVSFGGENVLELEA                    MERNTRETTPCSLIRDPDTISTPGSTTRRSHSSSHCKVQTPVRHNIIPASAELEAFFA                    AEEQRQRQAFIDKYNFDPVNDCPLPGRFEWVKLD</aaseq>|
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==References==
DNA = <dnaseqindica>2961..3027#2611..2814#128..441#ccctccaaatccacccggggtccccctaccattttaaccccgcggccttagccgctaatgctccgcgtttgaaatcgctaagcgcacccgaaaccctagccccctcccctcccgagtcccgaccgccatgggcaagtacatgcgcaaggccaaggtggtggtctccggcgaggtggtggccgccgccgtcatggagctcgccgcggcgccgctcggggtgcgcacccgcgcccgctccctcgcgctgcagaagaggcagggcggggagtacctcgagctcaggagccgcaggctcgagaagctccctcctcccccgccgccgccgccgaggaggagggcgacggctgcggctgcgactgctgatgcgacggcggcggagagcgcggaggcggaggtgtcgttcgggggggagaacgtcctcgagctggaggccatggaaaggtggggattctctctctcttcttattgtgcgattctttttttgtttttcgtgggtttcttggttggattgattgggggaatcgcgtgattagggttcagggtttaagcaccgtacgggagttcttggggttcgatgtttctatccggtttttcgcatcggaaaattttggggattttttttcggtgcgattgtggcgctcggaattcctgtggccagttttggggtttcgaaagtatcgaaatggaggcgaggaatcttttttttttccatcacacgcggttgtaaagccccgatgctttcttggtgggattcttgtccctttgctaattgagacatgcaattcgtgctttccttgttgcctaaatttgttctttttccatgtttcttgtggcgatacagccttttctttttgccaatttcttgtcccttagcttgtttacaagttagaacccattttaacttcttttgaagaagggaaaaaaagaagaagagaaggtgttcccaagttttaatccaaatggttgcaagaaccacttctttgccccccaaatttacctcgaagaatccccccaaatttgttattgttttggatgataaaaaggtaggaactgtgcagtagtgctcaagctctcaactcaaatcccaattgaaacttgatcaattgattgagcccccctcttagtggggttactcccagtggccatggcctcctgcttttccttagtggaagggaaaagcagcatcctttccctcctgttctttgtgttttgtttggggggtagggacccctctcaatcttttaccaatcaaaagccctcaccttttgcaagaaatttctctcataaacatccttcccaaaggcaccccccatctcaccacccacctcaaggcctcattcttgcaactaactagcctgtcacttctctgggttctggaagggtgatgaaatggcatgccttggtaaaaccatcttcctgggccatgcccccaaattgtcaccaccattaaatgtttgaggtgaaaggagggggtcctccccctccccacaagtactagaagttgatttgttggtgatctttggttcaagctagggggatggaagaacattttaggatcagctagctaggctactactactactacttgcttctgcagttcttggcaggataatatttttagctactactactgtatctcacaagctagcaaacgttcttggttctagcactatcttgtggaggtgggggatcttcctcagcctaaacaggtcaaagaccctattttgctggcgtgtcctttggtgtaggatagctccatttgttagcttgaattgtgtgaaaaatacatgggttgcaccatcaccgaagtacccaagagtgggggcaacttgcttgcaagggacaaagggcgtgccgtatgagagagatgagcaagtgctgcgtcatttttggtttgtcatcttgggtgcaagatcaagcagcaggtgtcacaggactcaccacagcttgggctgtccttggtgccccatgtccaagggtgcattcattgcacctcctctagccatggcctaatggtgcatacttctgtgcctcaaggactgttgtctttgaaccattgatggatatctatctgcatccatttgttttaatccttggaagcaccatgcgtggcctaaatagtgtgatctgaacagtgagcatctaagctagccatggccctcccaagcatttgccatggtggaagctgcagtgcagagtcagcatgtggtgttgttgctgggccactgttggtgaccgtcctaccaccttttgcatgcagcagcagccagcagcagcttcggatgccggtgcttgggtctctaggatggagttatggccggggggatcacctcacctgagctagtcatgtgattcagatatgggagctccttagaccaaaccattttcttgtttcacttggccttgtgtttggttgtcccctagcctttttttggcatgtgagataaacattcagaggtggaacatggtttattttgcaggaccacggcgatgctgattttttttctcaatattaccggtgcatttttcttgtttagtttttggtacaaaagaaaaaaaagcttacgttgcatgttctgttttaaatttgtatgcttttgtttcttgcaggaataccagggagacgacaccttgcagcttgatcagggaccccgatacgattagcacccctggatctaccacaaggcgcagccactcgagttctcattgcaaggtgcaaacacccgtgcgccacaacattattccagcatcagcagagctggaagcgttcttcgctgccgaagagcaacggcaacgacaggctttcatcgacaagtacgatcttgctttgctcttctattatgttcagtaaatatatccctggatgcattgtgataatgtccatggccttgcaacttagaaatactataatggtgtattatcgctgactgacaatttaacttctttgtcgtaatcttcaggtataactttgatcctgtgaatgactgccctcttcccggccggtttgaatgggtcaagctagactgatagattttcaggaaaagaagggcaccatggacctctctgctccctccacagtagtagcgtggcagaggcgcttaccgtcaagttagctttgatcctgttgtaaaaatttagggttagcctgtagactcaatggtcaatgtgaacatacagaactgatgctgagttacaaccctaatccctcaactacaatgtaacccttaacagctcattctgtaaggaaccacctcctcctctagggcctagctagccttatcatctgttattaccagttgctggattaatgaagttagatctagatattgtgtcacagttt</dnaseqindica>|
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<references>
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001071364.1 RefSeq:Os10g0471700]|
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* <ref name="ref1">
}}
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Yang R, Tang Q, Wang H, Zhang X, Pan G, Wang H, Tu J. Analyses of two rice
[[Category:Genes]]
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(Oryza sativa) cyclin-dependent kinase inhibitors and effects of transgenic
[[Category:Japonica mRNA]]
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expression of OsiICK6 on plant growth and development. Ann Bot. 2011
[[Category:Oryza Sativa Japonica Group]]
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May;107(7):1087-101. doi: 10.1093/aob/mcr057. PubMed PMID: 21558459; PubMed
[[Category:Japonica Genes]]
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Central PMCID: PMC3091807.
[[Category:Japonica Chromosome 10]]
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</ref>
[[Category:Chromosome 10]]
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</references>
 +
 
 +
==Structured Information==
 +
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 10]]

Latest revision as of 01:47, 17 February 2017

The rice Os10g0471700 was reported as OsiICK6 in 2011 [1] by researchers from China.

Annotated Information

Gene Symbol

  • Os10g0471700 <=> OsiICK6,iICK6

Function

  • The significant changes displayed by the transgenic rice plants over-expressing OsiICK6 demonstrate that alterations in the expression of a CDK inhibitor can significantly affect plant growth and development in rice.

Phenotypic analysis

  • Over-expression of OsiICK6 resulted in multiple phenotypic effects on plant growth, morphology, pollen viability and seed setting.
  • In OsiICK6-over-expressing plants, leaves rolled toward the abaxial side, suggesting that cell proliferation is critical in maintaining an even growth along the dorsal–ventral plane of leaf blades.

Subcellular localization

  • OsiICK6 were localized in the nucleus of tobacco leaf cells

You can also add sub-section(s) at will.

Labs working on this gene

  • Institute of Crop Science, College of Agriculture and Biotechnology, Zhejiang University, Kaixuan Road 268,

Hangzhou 310029, China

  • Department of Biochemistry, University

References

  1. Yang R, Tang Q, Wang H, Zhang X, Pan G, Wang H, Tu J. Analyses of two rice (Oryza sativa) cyclin-dependent kinase inhibitors and effects of transgenic expression of OsiICK6 on plant growth and development. Ann Bot. 2011 May;107(7):1087-101. doi: 10.1093/aob/mcr057. PubMed PMID: 21558459; PubMed Central PMCID: PMC3091807.

Structured Information