Difference between revisions of "Os03g0406100"
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| − | + | The rice '''''Os03g0406100''''' was reported as '''''OsSPX5''''' in 2009 <ref name="ref1" /> by researchers from China. | |
==Annotated Information== | ==Annotated Information== | ||
| + | ===Gene Symbol=== | ||
| + | *'''''Os03g0406100''''' '''<=>''' '''''OsSPX5,SPX5''''' | ||
===Function=== | ===Function=== | ||
| − | + | * The rice (Oryza sativa L.) genome contains at least six genes exclusively with an SPX (SYG1/PHO81/XPR1) domain at the N-terminal, designated as '''''OsSPX1-6'''''. | |
| + | * Among them, five genes, '''''OsSPX1, OsSPX2, OsSPX3, OsSPX5 and OsSPX6''''' are responsive to Pi-starvation in shoots and/or in roots. | ||
| + | * '''''OsSPX1''''' regulates '''''OsSPX2, OsSPX3 and OsSPX5''''' at the transcription level. | ||
| + | * '''''OsSPX3''''' downregulates '''''OsIPS1''''' and suppresses the responses of '''''OsmiR399''''' and '''''OsPHO2''''' to Pi-starvation. | ||
| + | * Whether '''''OsSPX4''''' functions as ScPHO81 in Pi-signaling pathway on plant Pi-starvation tolerance is an interesting question. | ||
| + | * Overexpression of '''''OsSPX3''''' inhibits plant growth | ||
===Expression=== | ===Expression=== | ||
| − | + | * Except for OsSPX5, the expression was detected only in roots and callus, a constitutive expression pattern was observed in five other genes. | |
| + | * The transcript level of OsSPX1-3 was higher in root, leaf and callus than in stem, panicle and seed. | ||
| + | * The transcript level of OsSPX6 in root and leaf was much higher than in other tissues. RT-PCR analysis indicates that except for OsSPX4, other SPX genes were induced by Pi-starvation in shoot and/or in root | ||
| − | === | + | ===Subcellular Localization=== |
| − | + | * '''''OsSPX1''''' and '''''OsSPX2 '''''were localized exclusively to the nucleus, and OsSPX4 to membrane (Figure 4H,I,K), while fluorescence of OsSPX3-GFP was present in onion cells as many fluorescent speckles in the cytoplasm (Figure 4J). | |
| + | |||
| + | [[File:238-Os10g0392600.png|center|thumb|727px|'''Snapshot Figure 4.''' ''Histochemical analysis and subcellular localization of the OsSPX proteins.<ref name="ref1" />.'']] | ||
You can also add sub-section(s) at will. | You can also add sub-section(s) at will. | ||
==Labs working on this gene== | ==Labs working on this gene== | ||
| − | + | * State Key Laboratory of Plant Physiology and Biochemistry, College of Life Sciences, Zhejiang University, Hangzhou 310058, China | |
| + | ==References== | ||
| + | <references> | ||
| + | * <ref name="ref1"> | ||
| + | Wang Z, Hu H, Huang H, Duan K, Wu Z, Wu P. Regulation of OsSPX1 and OsSPX3 on | ||
| + | expression of OsSPX domain genes and Pi-starvation signaling in rice. J Integr | ||
| + | Plant Biol. 2009 Jul;51(7):663-74. doi: 10.1111/j.1744-7909.2009.00834.x. PubMed | ||
| + | PMID: 19566645. | ||
| + | </ref> | ||
| + | </references> | ||
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==Structured Information== | ==Structured Information== | ||
| − | + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 3]] | |
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| − | [[Category:Genes]] | ||
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| − | [[Category:Oryza Sativa Japonica Group]] | ||
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Latest revision as of 02:14, 17 February 2017
The rice Os03g0406100 was reported as OsSPX5 in 2009 [1] by researchers from China.
Contents
Annotated Information
Gene Symbol
- Os03g0406100 <=> OsSPX5,SPX5
Function
- The rice (Oryza sativa L.) genome contains at least six genes exclusively with an SPX (SYG1/PHO81/XPR1) domain at the N-terminal, designated as OsSPX1-6.
- Among them, five genes, OsSPX1, OsSPX2, OsSPX3, OsSPX5 and OsSPX6 are responsive to Pi-starvation in shoots and/or in roots.
- OsSPX1 regulates OsSPX2, OsSPX3 and OsSPX5 at the transcription level.
- OsSPX3 downregulates OsIPS1 and suppresses the responses of OsmiR399 and OsPHO2 to Pi-starvation.
- Whether OsSPX4 functions as ScPHO81 in Pi-signaling pathway on plant Pi-starvation tolerance is an interesting question.
- Overexpression of OsSPX3 inhibits plant growth
Expression
- Except for OsSPX5, the expression was detected only in roots and callus, a constitutive expression pattern was observed in five other genes.
- The transcript level of OsSPX1-3 was higher in root, leaf and callus than in stem, panicle and seed.
- The transcript level of OsSPX6 in root and leaf was much higher than in other tissues. RT-PCR analysis indicates that except for OsSPX4, other SPX genes were induced by Pi-starvation in shoot and/or in root
Subcellular Localization
- OsSPX1 and OsSPX2 were localized exclusively to the nucleus, and OsSPX4 to membrane (Figure 4H,I,K), while fluorescence of OsSPX3-GFP was present in onion cells as many fluorescent speckles in the cytoplasm (Figure 4J).
Snapshot Figure 4. Histochemical analysis and subcellular localization of the OsSPX proteins.[1].
You can also add sub-section(s) at will.
Labs working on this gene
- State Key Laboratory of Plant Physiology and Biochemistry, College of Life Sciences, Zhejiang University, Hangzhou 310058, China
References
