Difference between revisions of "Os01g0178500"

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(Created page with "{{JaponicaGene| GeneName = Os01g0178500| Description = Similar to Auxin-responsive protein (Aux/IAA) (Fragment)| Version = NM_001048727.1 GI:115434867 GeneID:4323871| Leng...")
 
 
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{{JaponicaGene|
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The rice '''''Os01g0178500''''' was reported as '''''OsIAA1''''' in 2009 <ref name="ref1" /> by researchers from China.  
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GeneName = Os01g0178500|
 
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Description = Similar to Auxin-responsive protein (Aux/IAA) (Fragment)|
 
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Version = NM_001048727.1 GI:115434867 GeneID:4323871|
 
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Length = 2523 bp|
 
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Definition = Oryza sativa Japonica Group Os01g0178500, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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* Aux/IAA and auxin response factor (ARF) are two important families that have been well recognized for their roles in auxin-mediated responses.
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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* '''''OsIAA1''''' may play important roles in the cross-talk of auxin and brassinosteroid signaling pathways and plant morphogenesis.
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|
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Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
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===Expression===
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AP = Chromosome 1:4072916..4075438|
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* The results indicated that OsIAA1 was constitutively expressed in all the tissues and organs investigated.  
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CDS = 4073313..4073332,4073450..4073511,4074624..4074738,4074819..4075000,4075097..4075317<br>|
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* The expression of this gene was induced by various phytohormones including IAA, 2,4-D, kinetin, 24-epibrassinolide, and jasmonic acid.
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GCID = <gbrowseImage1>
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name=NC_008394:4072916..4075438
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===Phenotypic analysis===
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source=RiceChromosome01
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* Over-expression of OsIAA1 in rice resulted in reduced inhibition of root elongation to auxin treatment, but increased sensitivity to 24-epiBL treatment. In addition, the OsIAA1-overexpression transgenic plants showed distinctive morphological changes such as decreased plant height and loose plant architecture.
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preset=GeneLocation
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</gbrowseImage1>|
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You can also add sub-section(s) at will.
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GSID = <gbrowseImage2>
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name=NC_008394:4072916..4075438
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==Labs working on this gene==
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source=RiceChromosome01
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* National Center of Plant Gene Research (Wuhan), National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China
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preset=GeneLocation
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==References==
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</gbrowseImage2>|
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<references>
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CDNA = <cdnaseq>atgtcggtggagacggagcggagctccacggagtcgtccgccgcgtcggggctcgacttcgaggacaccgccctcaccctccgcctcccgggctccctcgccgccgccgccgcacctgaccccgaccgcaagcgctcctccccctcctcctccgacgccgccgacgccgcagacaactcctcccccctcgccgccgccgccgatgctccccctgctcccaaggcgagggtggtggggtggccgccggtgaggtcgttcaggaagaacgcgctggcggccaagttcgtgaaggtggccgtggacggcgcgccgtacctgcgcaaggtggacctcgaggcctactccggctacgaccagctcctccgcgcgctccaggacaagttcttctcccacttcaccatccggaagttcgccgacgacgagaggaagctggtggacgcggtgaacgggacggagtacgtgccgacgtacgaggacaaggacggcgactggatgctcgtcggcgacgtcccctggaagatgtttgtggaaacttgccagcgccttcgtctcatgaaaagctcagaggctgtcaacttagcaccaagagccgctcaatga</cdnaseq>|
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* <ref name="ref1">
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AA = <aaseq>MSVETERSSTESSAASGLDFEDTALTLRLPGSLAAAAAPDPDRK                    RSSPSSSDAADAADNSSPLAAAADAPPAPKARVVGWPPVRSFRKNALAAKFVKVAVDG                    APYLRKVDLEAYSGYDQLLRALQDKFFSHFTIRKFADDERKLVDAVNGTEYVPTYEDK                    DGDWMLVGDVPWKMFVETCQRLRLMKSSEAVNLAPRAAQ</aaseq>|
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Song Y, You J, Xiong L. Characterization of OsIAA1 gene, a member of rice
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DNA = <dnaseqindica>2107..2126#1928..1989#701..815#439..620#122..342#attttgctttgctttctttgctttcctctcctctctcgccgcccacctcgccgtcgccgccgccgcgagggccaacgccggcgaagtccgcgagccgaagcatcacacagctgcgccagcgatgtcggtggagacggagcggagctccacggagtcgtccgccgcgtcggggctcgacttcgaggacaccgccctcaccctccgcctcccgggctccctcgccgccgccgccgcacctgaccccgaccgcaagcgctcctccccctcctcctccgacgccgccgacgccgcagacaactcctcccccctcgccgccgccgccgatgctccccctgctcccaagtatatacaatacactgcctcttctcttgtgttcttgcgcgcgagaggtttgattgggtggtgtttggattgattggtgaggttgtggtttgtcagggcgagggtggtggggtggccgccggtgaggtcgttcaggaagaacgcgctggcggccaagttcgtgaaggtggccgtggacggcgcgccgtacctgcgcaaggtggacctcgaggcctactccggctacgaccagctcctccgcgcgctccaggacaagttcttctcccacttcaccatccgtaagctcttcttcttcatcatctctcgatccatctgattctgttggttgttcgagcaattgacgggaggaaagttgcagggaagttcgccgacgacgagaggaagctggtggacgcggtgaacgggacggagtacgtgccgacgtacgaggacaaggacggcgactggatgctcgtcggcgacgtcccctggaagtgagcctcttctttgatttcttgccaaccttttccttttccccttgattcattcatcacttggttgtgaaattcgtgttccagtgccagatcttagtatgattcttgatggttttccatagtggataatttgttggtctggttcttggaccgaccaggttagaatgtcttggctctgattcgttcgagaaattcagagtacttcatttgttgatttggagctatacataactgtagaggctttggtactattgctaaaagtggtattttgtgctgatagagatctgaaatgaatttggtatatagatgcatgatgctttacgttttgggtaggaagcagatatggtttgctttgcttgtggttttagtctaaaaatgggtgctttttatatgttgtgtggtctcatggatatgctcttagttgttgacataatccaatgcaagttcatgaatgcatttcaaagatttggagttgcttatgtggctctggtctgtgttgatctgaagaaaggggggttagttagggatctgaacaaataatgcattactaacaacaaatcataccctgattccatagatagtgaaaccccttccctttcagtcttgaggttaggttacattggaaatgcagattggattctactagtggccaataataggaagttctgtttggttcttgttgcactacgtcttgcgttactgttgcttccttagcagattaagcaactttgatgtatcacttccaaataaataaattgatgtgcaatctctctcctcctcagagcaactagcctatgaggcctctgtacaataaaaagaagaaccccactttgttaggatagactactttggataagcttgcctttctagttttgttctccactacctggaacacactgttcattgacctatgggctgtgctatgaggcgtcgatccttcttgatccttctagctaaatttcgtttgattaatttttgagattgtttttgtcctacttattatgtttctttatcttactttttggtgaactgcaacagttctcatgaaacagtaaatggcacaaatgctctctttttatcttcagcagtttctgaccttaatggttgtgcaggatgtttgtggaaacttgccagcgccttcgtctcatgaaaagctcagaggctgtcaacttaggtacatgtttgcttagttgttttaaattcacctgcctacgcaagagctgtttttactctcttttgtacctgcgtcctcagccgtcttgttctaatcggtttgttctctcccttgcagcaccaagagccgctcaatgaggcattcccggtgcccatgaccgtgtggttggattgaaagaaagtggaagctttgccccgccgatgttcgcccacgtgtgatatgaacatgtacagttgtctcctactacttttggttccttgatgatgctgagttgagaaaaaggttgtagtttcgttactcgtctgtagtctctccatatatagataatgaagcactgaagcttgaaatatacacctacagtttgtctctttatgaataagaccatatacgcaaaaaaaccgatgttctttgctgcggctcgcgtgtcgtcaggctatatgcagttttttgtcgcaccataggcgatggacatctctggccttatactttcgtaaaaatcttatcatgttaagcgatggtcttgctttggagttc</dnaseqindica>|
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Aux/IAA family involved in auxin and brassinosteroid hormone responses and plant
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001048727.1 RefSeq:Os01g0178500]|
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morphogenesis. Plant Mol Biol. 2009 Jun;70(3):297-309. doi:
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}}
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10.1007/s11103-009-9474-1. PubMed PMID: 19266169.
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[[Category:Genes]]
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</ref>
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[[Category:Japonica mRNA]]
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</references>
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[[Category:Oryza Sativa Japonica Group]]
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[[Category:Japonica Genes]]
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[[Category:Japonica Chromosome 1]]
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==Structured Information==
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[[Category:Chromosome 1]]
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]]

Latest revision as of 03:14, 18 February 2017

The rice Os01g0178500 was reported as OsIAA1 in 2009 [1] by researchers from China.

Annotated Information

Function

  • Aux/IAA and auxin response factor (ARF) are two important families that have been well recognized for their roles in auxin-mediated responses.
  • OsIAA1 may play important roles in the cross-talk of auxin and brassinosteroid signaling pathways and plant morphogenesis.

Expression

  • The results indicated that OsIAA1 was constitutively expressed in all the tissues and organs investigated.
  • The expression of this gene was induced by various phytohormones including IAA, 2,4-D, kinetin, 24-epibrassinolide, and jasmonic acid.

Phenotypic analysis

  • Over-expression of OsIAA1 in rice resulted in reduced inhibition of root elongation to auxin treatment, but increased sensitivity to 24-epiBL treatment. In addition, the OsIAA1-overexpression transgenic plants showed distinctive morphological changes such as decreased plant height and loose plant architecture.

You can also add sub-section(s) at will.

Labs working on this gene

  • National Center of Plant Gene Research (Wuhan), National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China

References

  1. ↑ Song Y, You J, Xiong L. Characterization of OsIAA1 gene, a member of rice Aux/IAA family involved in auxin and brassinosteroid hormone responses and plant morphogenesis. Plant Mol Biol. 2009 Jun;70(3):297-309. doi: 10.1007/s11103-009-9474-1. PubMed PMID: 19266169.


Structured Information