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| − | {{JaponicaGene|
| + | The rice '''''Os05g0393800''''' was reported as '''''OsOSCA1.3''''' in 2015 <ref name="ref1" /> by researchers from China. |
| − | GeneName = Os05g0393800|
| |
| − | Description = Protein of unknown function DUF221 domain containing protein|
| |
| − | Version = NM_001061992.1 GI:115463714 GeneID:4338696|
| |
| − | Length = 5962 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os05g0393800, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| | | | |
| − | ORGANISM Oryza sativa Japonica Group
| + | ==Annotated Information== |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| + | ===Gene Symbol=== |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| + | *'''''Os05g0393800''''' '''<=>''' '''''OsSTA149, OsOSCA1.3, OsIOSCA1.3''''' |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| + | ===Function=== |
| − | |
| + | * Hyperosmolality-gated calcium-permeable channels (OSCA) were first characterised as an osmosensor in Arabidopsis and are involved in the perception of extracellular changes to trigger hyperosmolality-induced [Ca 2+ ] i increases (OICI). |
| − | Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
| + | * The entire OSCA family is characterised by the presence of a conserved DUF221 domain, which functions as an osmotic-sensing calcium channel. |
| − | AP = Chromosome 5:19166953..19172914|
| + | |
| − | CDS = 19167605..19167918,19168078..19168227,19169004..19169139,19169280..19169381,19169614..19169733<br>,19169858..19169938,19170099..19170439,19171354..19171599,19171759..19172083<br>,19172225..19172458,19172564..19172818|
| + | You can also add sub-section(s) at will. |
| − | GCID = <gbrowseImage1>
| + | |
| − | name=NC_008398:19166953..19172914
| + | ==Labs working on this gene== |
| − | source=RiceChromosome05
| + | * Beijing Key Laboratory of Gene Resource and Molecular Development, College of Life Sciences, Beijing Normal University, Beijing 100875, China |
| − | preset=GeneLocation
| + | |
| − | </gbrowseImage1>|
| + | ==References== |
| − | GSID = <gbrowseImage2>
| + | <references> |
| − | name=NC_008398:19166953..19172914
| + | * <ref name="ref1"> |
| − | source=RiceChromosome05
| + | Li Y, Yuan F, Wen Z, Li Y, Wang F, Zhu T, Zhuo W, Jin X, Wang Y, Zhao H, Pei |
| − | preset=GeneLocation
| + | ZM, Han S. Genome-wide survey and expression analysis of the OSCA gene family in |
| − | </gbrowseImage2>| | + | rice. BMC Plant Biol. 2015 Oct 26;15:261. doi: 10.1186/s12870-015-0653-8. PubMed |
| − | CDNA = <cdnaseq>atgggttctctcacagatatcggcgtcgccgcaggaataaacatactgtccgcattgggttttcttctcgcatttgcggttctcaggatacagcctatcaacgacagggtctactttcccaaatggtacctcaaagggacaagaagcagcccaagaagcatgggaacggttttctcaaagtttgtcaatgctgatctctcgacgtatatccgcttcctgaattggatgcctgcagcgctgcaaatgcctgagcccgagttgattgagcacgcaggcctcgactccgcggtatatgtccgcatatatcttcttgggttaaaaatatttgtgccgattgctgtgctggcattcattgtccttgttcctatcaactgggctagtggaactttggagaaggaaaagagtctaagttatgatcaaattgacaagctttcaatatctaaccttggaaaaggatcgaaaagattttgggcacacatagtgatggcctatgtatttacgttttggacgtttttcgtgttgtatcgtgaatacaaggttgtaacaactatgagattgcgctttcttgctattcagaatcgtcgagctgatcagtttacggtcctggtgagaaatgtaccacctgacccagatgaaacagttagtgagcatgttgagcacttctttgctgtcaatcatcgtgatcattatctcagtcaccagaccgtatacaatgcaaacacccttgccggtttggttgagcagaagaaaggcttgcaaaactggctggtctactacgaaaaccagcatgctaaaaaccctgcaaaaaaaccaactatgaagacaggattgtggggcctttgggggaaaagagtggatgctatagaacactacaccactgccattgaggagttatgcaaacaggaagatgaggagagacacaaggtgatcactgatcctaatgctattatgccagctgcatttgtatctttcaaaagccggtggggagctgctgtttgcgctcaaacgcaacagacgagcaatccaacgttgtggcttaccgagtgggccccagaacctcgggatgttttctggcctaatctcgcgatccctttcgtcgagctctcagtccggaggcttatcatggccgttgcactcttctttctgacctttttcttcatgattccaattgcaattgtccaatcaatggcaaacttggatgacattgaacggatgcttcctttcctgaaacctataatagaaagaaattcactgaagtcaattgtgcaaggtttcttgccaggaatcgcattgaaaatcttccttatacttctcccaacatttcttgtgatgatgagcaaaattgaaggtcatacatcactatctggattggacaggaggactgcgtcgaagtattatttgttcctatttgtcaatgtgttcttggggagtgtaataactggaacagcgttccaacaactcaacaattttatccatcagtcagctaataaaattccagagattgtcggagaatccatccccatgaaagcaacatttttcatcacatatgtaatggttgatggctgggctggtgttgccgctgaggttcttaggttgaagccattggtcatgttccatataaagaatactttcttggtcagaaccgagcgagatcgagagcaggccatggaccctgggagcctggattttggcaccacagaaccaaggatacaactgtactttctgcttgggcttgtatatgctgtcgtgacaccaattcttctacctttcatcatagtgttctttagccttgcctatctagtattcagacaccagatcattaatgtctacaatcagcaatatgagagtggcgcgcaattctggccagatgtccaaagacgactggttatagcattgatagtatcacaaatcctcctgttgggactgctgagcacgcaggaagcagagaaatccactgttgctcttcttcctcttcctgtactgtccatatggttccactatgtttgcaagggccgctttgagccagcgtttataaagttccccctgcaggatgcaatggtaaaggatacactggaacgggcaaatgacccaaccctgaatttgagagagtacctgaaggatgcatatgtgcacccagtgttccaaaaaaatgacatatatgagtttgctggcatcgacgaggaagagaagaaccccatggttgcaacgaagcgccaatcgcgaatgaacacaccagtagatagcaagttcaattccagttctggcactaatgaaggagagttcagtcggatggctcctacctga</cdnaseq>|
| + | PMID: 26503287; PubMed Central PMCID: PMC4624379. |
| − | AA = <aaseq>MGSLTDIGVAAGINILSALGFLLAFAVLRIQPINDRVYFPKWYL KGTRSSPRSMGTVFSKFVNADLSTYIRFLNWMPAALQMPEPELIEHAGLDSAVYVRIY LLGLKIFVPIAVLAFIVLVPINWASGTLEKEKSLSYDQIDKLSISNLGKGSKRFWAHI VMAYVFTFWTFFVLYREYKVVTTMRLRFLAIQNRRADQFTVLVRNVPPDPDETVSEHV EHFFAVNHRDHYLSHQTVYNANTLAGLVEQKKGLQNWLVYYENQHAKNPAKKPTMKTG LWGLWGKRVDAIEHYTTAIEELCKQEDEERHKVITDPNAIMPAAFVSFKSRWGAAVCA QTQQTSNPTLWLTEWAPEPRDVFWPNLAIPFVELSVRRLIMAVALFFLTFFFMIPIAI VQSMANLDDIERMLPFLKPIIERNSLKSIVQGFLPGIALKIFLILLPTFLVMMSKIEG HTSLSGLDRRTASKYYLFLFVNVFLGSVITGTAFQQLNNFIHQSANKIPEIVGESIPM KATFFITYVMVDGWAGVAAEVLRLKPLVMFHIKNTFLVRTERDREQAMDPGSLDFGTT EPRIQLYFLLGLVYAVVTPILLPFIIVFFSLAYLVFRHQIINVYNQQYESGAQFWPDV QRRLVIALIVSQILLLGLLSTQEAEKSTVALLPLPVLSIWFHYVCKGRFEPAFIKFPL QDAMVKDTLERANDPTLNLREYLKDAYVHPVFQKNDIYEFAGIDEEEKNPMVATKRQS RMNTPVDSKFNSSSGTNEGEFSRMAPT</aaseq>|
| + | </ref> |
| − | DNA = <dnaseqindica>653..966#1126..1275#2052..2187#2328..2429#2662..2781#2906..2986#3147..3487#4402..4647#4807..5131#5273..5506#5612..5866#accgggctggtcgatctgcctcgttggcggccggccgccggccgatcgtgatctgacaggacagccatttgcacgcgtctctccctcgttttactaccatccacaggaggcccgaagtcacccgcgtctcggccctctccgtcctcgttgcttccgacgccggaggccgagagacaggcgacgcgcacgtctgtctgcgccgttgccgcagatcagcctgacgaggtaatcgtgcgcgtgcgcctgcgcctcgatcgatcgaccattcctgccctactcctcgatttgttcgcagtcgaattggattgcgatgtgctctcttcctcctcggttttcatcgatcgcttccttctttttgggcgcgttacttcttgaataaatccttttcattttctcaaactgtcaaacaccttgaacaatatttgccgttatctcgattcaccattcatacccttcttactttgtgatgatcatcacctaggtttattcgacttcaccaatagtctgtcacgtttattgtgttacaactgagaattaacaaattctttctgaccatttttccaattcattgcagataccagctctaccaacaactcccgttacttctctgtatgatgcctgttctgaactgagtcttcatagatagagagaaatgggttctctcacagatatcggcgtcgccgcaggaataaacatactgtccgcattgggttttcttctcgcatttgcggttctcaggatacagcctatcaacgacagggtctactttcccaaatggtacctcaaagggacaagaagcagcccaagaagcatgggaacggttttctcaaagtttgtcaatgctgatctctcgacgtatatccgcttcctgaattggatgcctgcagcgctgcaaatgcctgagcccgagttgattgagcacgcaggcctcgactccgcggtatatgtccgcatatatcttcttgggtgagcatgctgttcgtgtttcgcaattggtctttttttttgtctttaaagtttccgaaaaggttgaattcaactgataaatgtgactatatgatttggattggatgtcagaacatattcggtgtattatgcttactgcatagttctcttgctatgcaggttaaaaatatttgtgccgattgctgtgctggcattcattgtccttgttcctatcaactgggctagtggaactttggagaaggaaaagagtctaagttatgatcaaattgacaagctttcaatatctaaccttggaaaaggatcgaaaaggtataattctctgtgcttcatgtgtgtgtcctaatgcttgccgcaccaccatggatcgtgcctttgtttctttgaataattacctgtgtcgcgtataatgttaccgctagtctttacttctcattcacggtataatgcataccatcatatccttcgaacaagataatgacattgaaggtttcctttcctatctgtactttgaaaaattggcggtcagacattttggaattttgtgaatatgtttgaagtttttcaatatcggtgcactattagatactttcaataaatttagtacaaaaatatttatgcagtgataacctatgcttaacctaaaattgtaacaattaatggagactggtgtgactaataatccaaactggacctcttcgaaattgatgcatgttctaactttttcacataaatctgctctattaatacagaagtggcaaaccttctgccctttcttcaaaaagaaaaaaaagcttttcacataaatgaatgcaaaggctttgcctccaaataatttcccaattatcgatgattattctagcatttagtcatcatcacttttatcaaatcagtttttatgatgctctagcactagaatttgatcaggctcttgcggtatttttctaaccaacacaaatgcctactaattagttttttttcgttgtcaatttcactagtgagagtttagccgaatttatatcttgtgttcgatatcctgataggctgataatttctctaatgaatttatgttttttccctgtcaatagattttgggcacacatagtgatggcctatgtatttacgttttggacgtttttcgtgttgtatcgtgaatacaaggttgtaacaactatgagattgcgctttcttgctattcagaatcgtcgagctgatcagtttacggtgagagatctttcccgtaacactcagatcaacgaatttaaacttctttactagattatttcaactttgcaacttattatatagttatgcttctttttttttttgaatttacggcggtgaaaattttcttatttatctaggtcctggtgagaaatgtaccacctgacccagatgaaacagttagtgagcatgttgagcacttctttgctgtcaatcatcgtgatcattatctcagtcaccaggtaataaattttgctatcttcaatccgctgtggacttcagcattgctttttgtggaaaaactagataattaagttgtaaggaaatccaaataagaaacgactcattgtatttccttttgttctgttctcctgaattaccgacagttctttactcttagcacataacaaatagtccagctcaaatgtgtgctcctcatttggagtaatttcttttttatcatatgaccaacagaccgtatacaatgcaaacacccttgccggtttggttgagcagaagaaaggcttgcaaaactggctggtctactacgaaaaccagcatgctaaaaaccctgcaaaaaaaccaactatgaaggtacgggttgtctgttgcagatttattctcatggacccaaagctttttaatctactagtatgaagttattgttttagtttctgctaatcttgcaagtggcatgaatcaactacatttcttgtagacaggattgtggggcctttgggggaaaagagtggatgctatagaacactacaccactgccattgaggagttatgcaaacaggtgcaagtttcagtaattcattggaagcattttcatgctttcaccatgttgacactcgacagtgttaccagactacttgaccaccaattttccttcgataaacatatatttaccctgtaacaatcaaaataccaaacgaaattgcacacttgcattgcaggaagatgaggagagacacaaggtgatcactgatcctaatgctattatgccagctgcatttgtatctttcaaaagccggtggggagctgctgtttgcgctcaaacgcaacagacgagcaatccaacgttgtggcttaccgagtgggccccagaacctcgggatgttttctggcctaatctcgcgatccctttcgtcgagctctcagtccggaggcttatcatggccgttgcactcttctttctgacctttttcttcatgattccaattgcaattgtccaatcaatggcaaacttggatgacattgaacggatgcttcctttcctgaaacctataatagaaaggtgactgttattacccattgtttttgcagtttaatttccataaaaaatgcatttgcagcatgttgttgatcagtgcatctacatattttttgccttcctatcatgaaaacagttagataggtccaaattttgactagtaatgatactggtatgatggtaccatactgaaataacatccaatttcatataaataaatgcatatgcatttcaaactggatgtatgattggaagattttgcaattcattatgttacattgttgacataatttctgggtaaacatttgtttagcacgctgttgagtacttatttctttaagtcactctttcttgctaactaggatataatataaagcaacaggaatcgaaccactcatataataaactgtaataaagtagacttttggatttgttgaacatgctgtagcctgtaggagtgaacagttaccttctacatttctttatcattgaacaaggagtaatgtctgaatgttggaattgagtacaaccattaaaatgtttcattttgctgtcttcaaccttttgataaacccataaaagtgtgttgctgctgggtgtgtgactcctggagttagcaccctgctatgcttggacgtgttcagttctggatgttcatttgcattcctttgaatctgaaaatttatagggctaccaaatttagataatgacaggtcaaacgtgtatatcataacagaaataatgctccacaagtgcatagatgcatgacttgggttcatgtttaaacacttcaaaatttccctggctagataacaaagtgagtaaagaaaagaaaaataaatttaacaaaccccacatttgtcacattactgttgtttactgtttgtcacatagtgtttttctggatctaaaatcatttctgatgcaatgtactgcagaaattcactgaagtcaattgtgcaaggtttcttgccaggaatcgcattgaaaatcttccttatacttctcccaacatttcttgtgatgatgagcaaaattgaaggtcatacatcactatctggattggacaggaggactgcgtcgaagtattatttgttcctatttgtcaatgtgttcttggggagtgtaataactggaacagcgttccaacaactcaacaattttatccatcagtcagctaataagtatgctcaatctgtcattgcttctttgttatggatgtgggttagggggtgtgtttccctaaccccctgacccacattggttaagttggttaatgtttaccagctagccaataatactaataccttaccttgacaccttttgccttttgttttcacaagaattccagagattgtcggagaatccatccccatgaaagcaacatttttcatcacatatgtaatggttgatggctgggctggtgttgccgctgaggttcttaggttgaagccattggtcatgttccatataaagaatactttcttggtcagaaccgagcgagatcgagagcaggccatggaccctgggagcctggattttggcaccacagaaccaaggatacaactgtactttctgcttgggcttgtatatgctgtcgtgacaccaattcttctacctttcatcatagtgttctttagccttgcctatctagtattcagacaccaggtactagtctgccttcaagtttaaatatacccttttatcatattgccacattcacaatggcagaagcatacgtttccggtcattcttcaatcttctcttagcacggtctgctaatctttttttctgcttcttttttgcaagatcattaatgtctacaatcagcaatatgagagtggcgcgcaattctggccagatgtccaaagacgactggttatagcattgatagtatcacaaatcctcctgttgggactgctgagcacgcaggaagcagagaaatccactgttgctcttcttcctcttcctgtactgtccatatggttccactatgtttgcaagggccgctttgagccagcgtttataaagttccccctgcaggttagactgaaactttactcttcacacatgcattcaccatagcatatagtaaaattaaaaactaagctagaacaatcctgatacataaacattttggtcttgtaggatgcaatggtaaaggatacactggaacgggcaaatgacccaaccctgaatttgagagagtacctgaaggatgcatatgtgcacccagtgttccaaaaaaatgacatatatgagtttgctggcatcgacgaggaagagaagaaccccatggttgcaacgaagcgccaatcgcgaatgaacacaccagtagatagcaagttcaattccagttctggcactaatgaaggagagttcagtcggatggctcctacctgaagcttgatttttcatcagtcaatgtaaacattttgcagtttggtaatattgtaaatgttcaggcaaaaaggaaatacaaggtttaaacaatgttgg</dnaseqindica>|
| + | |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001061992.1 RefSeq:Os05g0393800]|
| + | </references> |
| − | }}
| + | |
| − | [[Category:Genes]] | + | ==Structured Information== |
| − | [[Category:Japonica mRNA]]
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]] |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]]
| |
| − | [[Category:Japonica Chromosome 5]] | |
| − | [[Category:Chromosome 5]]
| |
