Difference between revisions of "Os09g0522200"
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| − | + | The rice '''''Os09g0522200''''' was reported as '''''OsDREB1A''''' in 2006 <ref name="ref1" /> by researchers from Japan. | |
==Annotated Information== | ==Annotated Information== | ||
| + | ===Gene Symbol=== | ||
| + | *'''''Os09g0522200''''' '''<=>''' '''''OsDREB1A,CBF3, OsCBF3, OsDREB1A/OsCBF3, ERF24, OsERF24''''' | ||
| + | |||
===Function=== | ===Function=== | ||
| − | + | * The transcription factors dehydration-responsive element-binding protein 1s (DREB1s)/C-repeat-binding factors (CBFs) specifically interact with the DRE/CRT cis-acting element and control the expression of many stress-inducible genes in Arabidopsis. | |
| − | + | * The genes for DREB1 orthologs, '''''OsDREB1A''''' and '''''OsDREB1B''''' from rice, are induced by cold stress, and overexpression of DREB1 or OsDREB1 induced strong expression of stress-responsive genes in transgenic Arabidopsis plants, resulting in increased tolerance to high-salt and freezing stresses. | |
| + | * '''''OsDREB1A''''' contained an open reading frame of 238 amino acids and encoded a putative protein with a predicted molecular mass of 25.6 kDa. | ||
===Expression=== | ===Expression=== | ||
| − | + | * The expression patterns of the ''OsDREB'' genes were analyzed by RNA-gel blot hybridization. | |
| + | * The ''OsDREB1A'' genes were not responsive to exposure to ABA but they were induced within 40 min after exposure to cold stress. | ||
| + | * ''OsDREB1A'' was also induced within 5 h after salt treatment and was transiently expressed in wounded seedlings. | ||
===Evolution=== | ===Evolution=== | ||
| − | + | * The analyses of the similarities of the ERF/AP2 domains of the ''OsDREB'' proteins and compared them with those in Arabidopsis and other genera. | |
| − | + | * The '''''OsDREB1''''' proteins were classified into the A-1 (DREB1/CBF) subgroup which is one of five groups of ERF/AP2-related proteins– AP2 subfamily,RAV subfamily, DREB subfamily, ERF subfamily, and one very specific gene, AL079349. | |
| − | + | * The DREB1-type ERF/AP2 domains in the three monocots were closely related to each other but distant from those in the dicots. | |
==Labs working on this gene== | ==Labs working on this gene== | ||
| − | + | *Biological Resources Division, Japan International Research Center for Agricultural Sciences (JIRCAS), Japan. | |
| + | *Key Laboratory of Agro-Ecological Processes in Subtropical Region, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Changsha, China | ||
==References== | ==References== | ||
| − | + | <references> | |
| + | * <ref name="ref1"> | ||
| + | Ito Y, Katsura K, Maruyama K, Taji T, Kobayashi M, Seki M, Shinozaki K, | ||
| + | Yamaguchi-Shinozaki K. Functional analysis of rice DREB1/CBF-type transcription | ||
| + | factors involved in cold-responsive gene expression in transgenic rice. Plant | ||
| + | Cell Physiol. 2006 Jan;47(1):141-53. PubMed PMID: 16284406. | ||
| + | </ref> | ||
| + | |||
| + | </references> | ||
==Structured Information== | ==Structured Information== | ||
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[[Category:Genes]] | [[Category:Genes]] | ||
[[Category:Japonica mRNA]] | [[Category:Japonica mRNA]] | ||
Latest revision as of 08:49, 23 February 2017
The rice Os09g0522200 was reported as OsDREB1A in 2006 [1] by researchers from Japan.
Contents
Annotated Information
Gene Symbol
- Os09g0522200 <=> OsDREB1A,CBF3, OsCBF3, OsDREB1A/OsCBF3, ERF24, OsERF24
Function
- The transcription factors dehydration-responsive element-binding protein 1s (DREB1s)/C-repeat-binding factors (CBFs) specifically interact with the DRE/CRT cis-acting element and control the expression of many stress-inducible genes in Arabidopsis.
- The genes for DREB1 orthologs, OsDREB1A and OsDREB1B from rice, are induced by cold stress, and overexpression of DREB1 or OsDREB1 induced strong expression of stress-responsive genes in transgenic Arabidopsis plants, resulting in increased tolerance to high-salt and freezing stresses.
- OsDREB1A contained an open reading frame of 238 amino acids and encoded a putative protein with a predicted molecular mass of 25.6 kDa.
Expression
- The expression patterns of the OsDREB genes were analyzed by RNA-gel blot hybridization.
- The OsDREB1A genes were not responsive to exposure to ABA but they were induced within 40 min after exposure to cold stress.
- OsDREB1A was also induced within 5 h after salt treatment and was transiently expressed in wounded seedlings.
Evolution
- The analyses of the similarities of the ERF/AP2 domains of the OsDREB proteins and compared them with those in Arabidopsis and other genera.
- The OsDREB1 proteins were classified into the A-1 (DREB1/CBF) subgroup which is one of five groups of ERF/AP2-related proteins– AP2 subfamily,RAV subfamily, DREB subfamily, ERF subfamily, and one very specific gene, AL079349.
- The DREB1-type ERF/AP2 domains in the three monocots were closely related to each other but distant from those in the dicots.
Labs working on this gene
- Biological Resources Division, Japan International Research Center for Agricultural Sciences (JIRCAS), Japan.
- Key Laboratory of Agro-Ecological Processes in Subtropical Region, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Changsha, China
References
- ↑ Ito Y, Katsura K, Maruyama K, Taji T, Kobayashi M, Seki M, Shinozaki K, Yamaguchi-Shinozaki K. Functional analysis of rice DREB1/CBF-type transcription factors involved in cold-responsive gene expression in transgenic rice. Plant Cell Physiol. 2006 Jan;47(1):141-53. PubMed PMID: 16284406.
