Difference between revisions of "Os02g0762400"

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(Created page with "{{JaponicaGene| GeneName = Os02g0762400| Description = Cyclin-dependent kinase inhibitor family protein| Version = NM_001054739.1 GI:115448848 GeneID:4330816| Length = 163...")
 
(Gene Symbol)
 
(4 intermediate revisions by 3 users not shown)
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{{JaponicaGene|
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The rice '''''Os02g0762400''''' was reported as '''''KRP1''''' in 2006 <ref name="ref1" /> by researchers from Belgium.  
GeneName = Os02g0762400|
 
Description = Cyclin-dependent kinase inhibitor family protein|
 
Version = NM_001054739.1 GI:115448848 GeneID:4330816|
 
Length = 1638 bp|
 
Definition = Oryza sativa Japonica Group Os02g0762400, complete gene.|
 
Source = Oryza sativa Japonica Group
 
  
  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Gene Symbol===
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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*'''''Os02g0762400''''' '''''<=>''''' '''''KRP1,OsiICK1, Orysa;KRP1, OrysaICK1, Orysa;ICK1, CDKI'''''
            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Function===
Chromosome = [[:category:Japonica Chromosome 2|Chromosome 2]]|
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* Kip-related proteins ('''''KRPs''''') play a major role in the regulation of the plant cell cycle.
AP = Chromosome 2:32998172..32999809|
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* '''''KRP1''''' plays an important role in the exit from the mitotic cell cycle during rice grain
CDS = 32998231..32998662,32998763..32998827,32998933..32999142,32999311..32999392|
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formation.
GCID = <gbrowseImage1>
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===Phenotypic analysis===
name=NC_008395:32998172..32999809
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* Phenotypic analysis revealed that overexpressed '''''KRP1''''' reduced cell production during leaf development.
source=RiceChromosome02
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* The reduced cell production in the leaf meristem was partly compensated by an increased cell size, demonstrating the existence of a compensatory mechanism in monocot species by which growth rate is less reduced than cell production, through cell expansion.
preset=GeneLocation
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* Furthermore, '''''KRP1''''' overexpression dramatically reduced seed filling. Sectioning through the overex-pressed KRP1 seeds showed that KRP overproduction disturbed the production of endosperm cells. The decrease in the number of fully formed seeds was accompanied by a drop in the endoreduplication of endosperm cells, pointing toward a role of '''''KRP1''''' in connecting endocycle with endosperm development.
</gbrowseImage1>|
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GSID = <gbrowseImage2>
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You can also add sub-section(s) at will.
name=NC_008395:32998172..32999809
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source=RiceChromosome02
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==Labs working on this gene==
preset=GeneLocation
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* Department of Plant Systems Biology, Flanders Interuniversity Institute for Biotechnology, Ghent University,B–9052 Ghent, Belgium (R.M.B., L.D.V., L.S.L.N., V.M., G.T.S.B., D.I.); and CropDesign NV, B–9052 Ghent, Belgium (A.P., A.-M.D., J.D.W., R.P., W.F.B., V.F.)
</gbrowseImage2>|
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==References==
CDNA = <cdnaseq>atgggcaagtacatgaggaagttcaggggggccacgggggaggagttggccgccatggaggtcacgcaggtggttggcgtccggacgaggtcgaggtcggcagcggcggcgggcgcgacgacgacgaaggtgaaggcggcgtcggcggcgtccaccaggaggaggaaggcgctgctgccgacggcggtcgtggggactactcgccgtgacggcgggagctgctacctccagctgaggagccgcatgctgttcatggccccgccgaggccggcgccggccgcgagggctccggttgtagcggaggcggcgggttccgggaacggagcggcggcgcatgcggcggctggcctctcgcgttgctccagcacggcgtcgtccgtggacgcggcggctcaggacaggagcctcgcgtgccgctccgacgtcgcggaggcaggcagcgagcatgtcccggagggctccgcgagcgactcggcgagcggccgtgaccgcgagaggagagaaacaactccatcaagctttctccccggagaggtgagcgatctggagtcggatctggctggaggacagaagcgcagccgtccactaccttctgcggcaacagcctcagcacagcaagccacgcggccgaagattccgccggccgccgagatcgaggcgttcttcgcggcggccgaggaggctgaggccaagcgcttcgccgccaagtacaacttcgacgtcgttcgcggcgtgcccctcgacgccggtcggttcgagtggactccggtggtcagcagccgaagctga</cdnaseq>|
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<references>
AA = <aaseq>MGKYMRKFRGATGEELAAMEVTQVVGVRTRSRSAAAAGATTTKV                    KAASAASTRRRKALLPTAVVGTTRRDGGSCYLQLRSRMLFMAPPRPAPAARAPVVAEA                    AGSGNGAAAHAAAGLSRCSSTASSVDAAAQDRSLACRSDVAEAGSEHVPEGSASDSAS                    GRDRERRETTPSSFLPGEVSDLESDLAGGQKRSRPLPSAATASAQQATRPKIPPAAEI                    EAFFAAAEEAEAKRFAAKYNFDVVRGVPLDAGRFEWTPVVSSRS</aaseq>|
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* <ref name="ref1">
DNA = <dnaseqindica>60..491#592..656#762..971#1140..1221#agggaaacggccaaagaaggcgacggcggcggcgcaggaggggcgcgcacgcggcgcagatgggcaagtacatgaggaagttcaggggggccacgggggaggagttggccgccatggaggtcacgcaggtggttggcgtccggacgaggtcgaggtcggcagcggcggcgggcgcgacgacgacgaaggtgaaggcggcgtcggcggcgtccaccaggaggaggaaggcgctgctgccgacggcggtcgtggggactactcgccgtgacggcgggagctgctacctccagctgaggagccgcatgctgttcatggccccgccgaggccggcgccggccgcgagggctccggttgtagcggaggcggcgggttccgggaacggagcggcggcgcatgcggcggctggcctctcgcgttgctccagcacggcgtcgtccgtggacgcggcggctcaggacaggagcctcgcgtgccgctccgacgtcgcggaggtgagggaatcgaaaccctagaattcgaattcgaaaaatgatcccagatctctaatcaccggttgctgaagcgtgcgtgctttttggtgatgttctacaggcaggcagcgagcatgtcccggagggctccgcgagcgactcggcgagcggccgtgaccgcgagaggtgggagaattctccctcatttccggcaaattcttctgaattatgcgttctgacatgcccctgacgccgaatcaccctcgatttttcaaaattttcaaattccaggagagaaacaactccatcaagctttctccccggagaggtgagcgatctggagtcggatctggctggaggacagaagcgcagccgtccactaccttctgcggcaacagcctcagcacagcaagccacgcggccgaagattccgccggccgccgagatcgaggcgttcttcgcggcggccgaggaggctgaggccaagcgcttcgccgccaagtaagtatatacagaatttttaccgctcgctgtaacatctagtaaaagttactgcgcgccctagctagcttcgttcttcttctccgatgctcgcgcgtggcgtgaatttgccgctgctgccggcgagcaagataattaacgtgcgtgcgcttcttcccatggccgcaggtacaacttcgacgtcgttcgcggcgtgcccctcgacgccggtcggttcgagtggactccggtggtcagcagccgaagctgaagcgagcgtgcagattaagcggaagctagaaaggaaggtacaggggggcgccgtgtagaaagggaaggcgagctagagagaggagaagaagaagaagaaaagatgctcatccaaagggaataaactggaaaagtgggagactacaaaaaaagaagcattatagcctaacaaccaccgattcgactcttttttctttcacattttctttgcatttttactcttactgtgtactagaaagtagtagcagtagtaaactagtaattcgtcccagtatttatcagaggtttatctcgataggaatagatatattatccccttactgtaattgcctccatcttgtatttggatggaaattaaatttactgtacagcagcagcagctgttctgcaagtttaagttaaccatcaccgttttatt</dnaseqindica>|
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Barrôco RM, Peres A, Droual AM, De Veylder L, Nguyen le SL, De Wolf J, Mironov
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001054739.1 RefSeq:Os02g0762400]|
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V, Peerbolte R, Beemster GT, Inzé D, Broekaert WF, Frankard V. The
}}
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cyclin-dependent kinase inhibitor Orysa;KRP1 plays an important role in seed
[[Category:Genes]]
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development of rice. Plant Physiol. 2006 Nov;142(3):1053-64. PubMed PMID:
[[Category:Japonica mRNA]]
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17012406; PubMed Central PMCID: PMC1630760.
[[Category:Oryza Sativa Japonica Group]]
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</ref>
[[Category:Japonica Genes]]
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[[Category:Japonica Chromosome 2]]
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</references>
[[Category:Chromosome 2]]
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 +
==Structured Information==
 +
    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 2]]

Latest revision as of 02:19, 24 February 2017

The rice Os02g0762400 was reported as KRP1 in 2006 [1] by researchers from Belgium.

Annotated Information

Gene Symbol

  • Os02g0762400 <=> KRP1,OsiICK1, Orysa;KRP1, OrysaICK1, Orysa;ICK1, CDKI

Function

  • Kip-related proteins (KRPs) play a major role in the regulation of the plant cell cycle.
  • KRP1 plays an important role in the exit from the mitotic cell cycle during rice grain

formation.

Phenotypic analysis

  • Phenotypic analysis revealed that overexpressed KRP1 reduced cell production during leaf development.
  • The reduced cell production in the leaf meristem was partly compensated by an increased cell size, demonstrating the existence of a compensatory mechanism in monocot species by which growth rate is less reduced than cell production, through cell expansion.
  • Furthermore, KRP1 overexpression dramatically reduced seed filling. Sectioning through the overex-pressed KRP1 seeds showed that KRP overproduction disturbed the production of endosperm cells. The decrease in the number of fully formed seeds was accompanied by a drop in the endoreduplication of endosperm cells, pointing toward a role of KRP1 in connecting endocycle with endosperm development.

You can also add sub-section(s) at will.

Labs working on this gene

  • Department of Plant Systems Biology, Flanders Interuniversity Institute for Biotechnology, Ghent University,B–9052 Ghent, Belgium (R.M.B., L.D.V., L.S.L.N., V.M., G.T.S.B., D.I.); and CropDesign NV, B–9052 Ghent, Belgium (A.P., A.-M.D., J.D.W., R.P., W.F.B., V.F.)

References

  1. Barrôco RM, Peres A, Droual AM, De Veylder L, Nguyen le SL, De Wolf J, Mironov V, Peerbolte R, Beemster GT, Inzé D, Broekaert WF, Frankard V. The cyclin-dependent kinase inhibitor Orysa;KRP1 plays an important role in seed development of rice. Plant Physiol. 2006 Nov;142(3):1053-64. PubMed PMID: 17012406; PubMed Central PMCID: PMC1630760.

Structured Information