Difference between revisions of "Os03g0239400"

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Please input one-sentence summary here.
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The rice '''''Os03g0239400''''' was reported as '''''OsbZIP26''''' in 2008 <ref name="ref1" /> by researchers from India.  
  
 
==Annotated Information==
 
==Annotated Information==
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===Gene Symbol===
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*'''''Os03g0239400''''' '''<=>''' '''''OsbZIP26,OsbZIP, bZIP26'''''
 
===Function===
 
===Function===
Please input function information here.
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* The basic leucine (Leu) zipper (bZIP) proteins compose a family of transcriptional regulators present exclusively in eukaryotes.
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* The '''''OsbZIP''''' proteins characteristically harbor a bZIP domain composed of two structural features: a DNA-binding basic region and the Leu zipper dimerization region.
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* bZIP proteins have been shown to regulate diverse plant-specific phenomena, including seed maturation and germination, floral induction and development, and photomorphogenesis, and are also involved in stress and hormone signaling.
  
 
===Expression===
 
===Expression===
Please input expression information here.
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* The researchers from India find specific or coexpression patterns of rice bZIP transcription factors starting from floral transition to various stages of panicle and seed development.
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* bZIP transcription factor-encoding genes in rice also displayed differential expression patterns in rice seedlings in response to abiotic stress and light irradiation.
  
 
===Evolution===
 
===Evolution===
Please input evolution information here.
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* The phylogenetic relationship among rice bZIP domains as well as with bZIP domains from other plant bZIP factors suggests that homologous bZIP domains exist in plants.  
 
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* Similar intron/exon structural patterns were observed in the basic and hinge regions of their bZIP domains.
You can also add sub-section(s) at will.
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* Detailed sequence analysis has been done to identify additional conserved motifs outside the bZIP domain and to predict their DNA-binding site specificity as well as dimerization properties, which has helped classify them into different groups and subfamilies, respectively.
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<br>
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'''''You can also add sub-section(s) at will.'''''
  
 
==Labs working on this gene==
 
==Labs working on this gene==
Please input related labs here.
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* Interdisciplinary Centre for Plant Genomics and Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi 110021, India
  
 
==References==
 
==References==
Please input cited references here.
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<references>
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* <ref name="ref1">
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Nijhawan A, Jain M, Tyagi AK, Khurana JP. Genomic survey and gene expression
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analysis of the basic leucine zipper transcription factor family in rice. Plant
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Physiol. 2008 Feb;146(2):333-50. PubMed PMID: 18065552; PubMed Central PMCID:
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PMC2245831.
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</ref>
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</references>
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==Structured Information==
 
==Structured Information==
{{JaponicaGene|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 3]]
GeneName = Os03g0239400|
 
Description = Similar to Transcription factor HBP-1a(C14)|
 
Version = NM_001056041.1 GI:115451810 GeneID:4332201|
 
Length = 11523 bp|
 
Definition = Oryza sativa Japonica Group Os03g0239400, complete gene.|
 
Source = Oryza sativa Japonica Group
 
 
 
  ORGANISM  Oryza sativa Japonica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
 
AP = Chromosome 3:7407417..7418939|
 
CDS = 7407925..7407981,7408248..7408373,7409577..7409654,7409749..7410011,7410532..7410574<br>,7411414..7411465,7411538..7411704,7411968..7412027,7412124..7412207<br>,7412487..7412591,7412673..7412732,7412809..7412865|
 
GCID = <gbrowseImage1>
 
name=NC_008396:7407417..7418939
 
source=RiceChromosome03
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=NC_008396:7407417..7418939
 
source=RiceChromosome03
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>atgggaaaaggagaggtagccactaggtccaaatctcaaaaatcatcggcgacacagaatgaacagagtacacccactaatcctcctactgcatatccggactggtctcaatttcaggcatactataatcctgctgggacagctccaatgaccccaccgggctttttccatccaaatgtggctccaagtcctcaggggcacccatatatgtggggtccacagatgatgcctccctatggaacaccgccgccatatgcggcgatgtatgcgcaagggacaccatatcagcaggcacctatgctaccgggttcacacccatacaatccttatcccgggcaatcaccaaatgggacagttcaaactcctacatctgctggcggaacagagacagataagtcaggcaaaagtaagcggaagactcccctgaagagatcgaaaggaagcttaggtaatcttgatgtagttgcaacaaaaaataaaaaggcgcccgcaaaaccttcagcatcctcatccaatgaaggttcttcacacagtgagagcggaagtggaagttcttctgaaggaagcagtacaaattcaaaaagtggttcaaggacaaaggatggttctgagcatggccagggtaatgatgctagcaacaaaggagctactgctcagagttctgcggttgagcccgtacaagcatctactgggccagttgtgcttaaccctatgatgccatactggcctgtccctcctcccatggctggcccagcaactggtgtaaacatgggaatggattactggggtactcctacttcagtacccatgcataataaagttattgcagcaccagcatcagctccttcatcaaactctcgtgatgttgttctcagtgatccagccatacaggatgagcgagaactgaagagacaaaagcggaagcaatcaaatagggaatcagctcgacgttcaagattacgcaagcaggctgaatgggaggaagtagccaatcgagctgatttgctaaagcaggaaaacagctcacttaaggaagaattgaaacaacttcaggagaagtgcaatagcttgacctcagaaaatacaactttacatgaaaagcttaaagagcttgaaggcgagaaatcaaatggaaactggtataaagagtga</cdnaseq>|
 
AA = <aaseq>MGKGEVATRSKSQKSSATQNEQSTPTNPPTAYPDWSQFQAYYNP                    AGTAPMTPPGFFHPNVAPSPQGHPYMWGPQMMPPYGTPPPYAAMYAQGTPYQQAPMLP                    GSHPYNPYPGQSPNGTVQTPTSAGGTETDKSGKSKRKTPLKRSKGSLGNLDVVATKNK                    KAPAKPSASSSNEGSSHSESGSGSSSEGSSTNSKSGSRTKDGSEHGQGNDASNKGATA                    QSSAVEPVQASTGPVVLNPMMPYWPVPPPMAGPATGVNMGMDYWGTPTSVPMHNKVIA                    APASAPSSNSRDVVLSDPAIQDERELKRQKRKQSNRESARRSRLRKQAEWEEVANRAD                    LLKQENSSLKEELKQLQEKCNSLTSENTTLHEKLKELEGEKSNGNWYKE</aaseq>|
 
DNA = <dnaseqindica>10959..11015#10567..10692#9286..9363#8929..9191#8366..8408#7475..7526#7236..7402#6913..6972#6733..6816#6349..6453#6208..6267#6075..6131#gtttttccccttcacaatcagagcgaaatcgagagagagggcggcggcggcgacttcgtgcgcaagagggaggcggcggcgacttcgtgcgcaagagggcgtgccacgggccagcgacgccagtgtcctcccttctccatcctccttcctctcatccctcctcccgccgatccctttcccttctccatcctccttcctctcatccgccgccgcgccggctcgtggctgagctgctcctgcacctcctcctcccagtcccgcgcccgcagctcccgcctctccccccgcttcttccgcctctcccgccctgtcagctccccctcacctccatagccaaggtaaggaaaccctagcagtgtgtaccatctctgatattttgtttataatgctagatctgcgcgattccgtttgcatgatatgaatgtccttgctgtcaacatctgttcaagcacactgcaatattttcgtttatcaattattacacagtagttattttcctgacgtgaacaagtattactatgtgatttgggcaagtattttttgatgagatgatttatgcttgagcatgacatggcaacgtgtttatttttctttgattgttgtattgtagatggataagaggaccaaggttttaatttttgctgcttctgccaatctattgttgtcaatgatggccatgattattcattctaggaaaagaaagatagtttctaggagggaaggtgttaaatatgacccaatggttgaaagggataggatgagaattgagtatctaaacacaaaaatttggaggaacgataacatgcttagacttagaaaagattctttctttcggttttgtaagctctttagaaatcgtggtttgcttgaagataccatccacatgtctattgaggaacaagtaactatgtttctaaatacagcagggcacaatcttagaaatagataagttggcactaattttgataggtccggagaaacagttagttgttatttcaacaagtgcttcatactgttggtgagctgcgagatgaactaatcaggcctccctcattggacaccccaagtaaaattgccgggaaccctaggtgggatccttactttaaggtgtgagattcatctgtgtctcattttcaattttatattttaacaaacctcaatgtcccctgatcttttatggtgttgaatataaaataggattgtatggagctattgatggcacacatattagagcctctgttcagaagaatatcgagccctcttttcgtggtaggaagtctcatgccacgcaaaatgtaatggcaactatagattttgatcttcggttcacttatgtcttggttggttgggagggtatagcacatgatgctgtagttttaagagatgcattggaacgtgaaaatggccttataccccaaggtaatagattaatttagttcatcaatttctccatctcaatagaaatgtgaccaacttgtccatcatatgataggaaaattctacctagttgatgctggatatggagccaaaccaggattcctccctccatttgtccggtaccacttgaatgagtgggggaataatccggtgcaaaatgaggagttgttcaactttaggcactcgtcccttcgtgtcacagttgaacgtgcatttggggcactaaagaggaggttcaaaattctagatgatgccaccccattctttccttgtccaactcaagtagatattgttgtagcttgttgcattattcataattgggtcatgaatgatggaattgatcagtatattacagatccattagatttgataagtgaacccacaaaagagtcatttgggtaggcaacagagccatctacgtttaaaaagtttggctagttgcattcttcgatggtgtctgtcccataaaggatgggtgctaagtttataaattttcttaggcataattaaattcccacaaattggataaattgaagtcatatgtccactgtcacccagacgattaaaccactcaagcattcatacaagtaaaaacaaatattaagtattgtaatgacgacgttttctgaagtgatagtagcatcaaacggatatgcatcaaaagaaaaccaacataagaaagataggaggcacataaaaaatgccaaacccacggatcctccacagcaattccatattctaaatcctcaaatcgcgccacggggacatcgagcagatctacccagaaccctcgccggcttagaattcacgaccggattcggattccaccgcccgcacgagcgaaaaaaaagaccagaaacaaatcgagagcttaagtcacacggtttactgggagggagggaggtcgaggcgctcgcgacggatctccactccacgccaatccagcagaggctgggcggcggcgagaggggaagcgcctcgaggtggcgccgcttgctccagcgggaggctgcccccgggttggggagcacttggatttgcgaaatttgggggaggtgtggcgagggagggagggaggtagaggcgctcgcgatggatcttcactctgcgccaatccaacagaggcggggcgacgacgagaggggaagcgccccgaggcggcgccgcttgctccagcgggaggctgcccccaggttggggagcacttggatttgcgaaatttgggggaggcatggcgcatgagaaagagagaggagaggaaaaaagttggtctaaaggcgtactccaatcacgagttcacgtagtccggaaggtgacctcctgagagagagggcgaataaaaaaacaagaagaagagcagctaagacaagtgtgtggtttgttggttgtgtgtgggcctggagaaaaagaatgcctggcccattacagaccgattccgcttccggctacagtaccatactaccatgtgctccaattggcacaatactaagctttttctttgcaattaaaaaaggacaactttttaaatccaaaattttcacatttaaaaattttggatttacgaatagatctaagtatatattttttagtttactttatcaaacaacgaaagtgatgaacccctacatacccctacaaataattaatttttaaaaaggcatgtttagtttcaagtcacctgaaaatacataaatctcggtcttttttagaccgtcaagatttcatccaaattcatgtggactttttctctcccccttatatcttctcttctatcgaaaggatggatgcacacaagcacggaacttatgtttggtttggggacctggtgggatgggttaggtccattaagggggagagaaaaagtccacatgaatttggatgaaatcttgacggtataaaaaagactgagatttgtgtattttcaagtgacttgaaactaaacatgcctttttaaaaattaataatttgtaggggtatgtaggggttcttcatcactttcgctgttcgcttaagtaaactaataaaaatatacagagctattcgtaaatccaaaatttttaaatgtgaaaattttggttttaaaaagttgtcatttttaattgcaaagagaaagcttctatactgtgccaatcggagcacatggtagtatggtactgtaaccagaagcgggctcgggctttaatgggttgggcatttttttctccaggcccacacaaccaacaaaccacacacttgtcttagccgctcttcttctttttttttattcaccctctctcaggaggtcaccttcccgacgacgtgaactcgtgatttgagtgtgccttcagaccaatttttttcctctctctctttctcatgcgccacgcctcccccgaatttcccaaatccaagcgctccccaacctgggggcagcctcccgctggagcaagcggccgcctcagggcacttcccctctcaccgccgccccgctctgctggattggcgcggagcagagatccatcgtgagcgcctctacctccctccctcccagtaagccgtgtgacttaagcttctagtcttcttttcgcccgcgcgggcggtggaatccgaatccagtcgcgagttctgagccggcgagggtgctgggtagatctactcagtgtccccgtgacgcgatttgaggatttagaatgtggaattgccgtggaggatccgtgggtttggcgcttttttttttgcctcctgtctttcttatgttgtttttttttctgatgcatatctgtttgatgctacatcacttcagaaaacgtcgtcattacaatacttaatatttgtttttccttgtacgaatgcctcagtggtgtaatcacgtgggcgacggtggaaatcaatttatccagtttgtgggaatttaattatgcctgagaaaatttataaactaagcacccatcctttatgggacagacaccatcgaagaatgtaactagccaaactttttaaacgtagatcaccaatacggacacaagtattttgattaccacttaagtttactacggagtaccatgttactggaaaactactgttagagaagtgtgtcggaaaccgtgtcaaaatctgagataccattattcatgcatatggaaaataattatggagtggccaaacccctaatgctggggttcagtcccgtgtcatggctagttggctacacggtcctgtgctcccaccactaaaaactaagcccagttctgctggcatacagatagactcatcctataaactcttaatcaactgaaatatttctacacctggctgcctgaaggttttagtggattgtcgtcaagcatgaaatatctatttcttgataatttgtgtggtgcattaaagcagcacgcattccttacctaaatgcctttttgttgacacaaaagcatccctgattgcaatacgtgaatagccatagcctttttacaacaaaggcactaattatctaattctaatagagtattgtccaactggggcataaagatttaactaagtaataagaatgcttgtgatatgtttttctagcagtctttttttttctttccttttattttctaggaaaaacaggagcataatatgaagcaaaagcattgatccttgtgttaacagctactattaataatagctaatgacaaacaccttaatgcgaggtgcatcttgcctgacgtgttggatgaggatgacgccataagttgctgcttaaaagaacctccatcgtcaattctacccgcatttacttgacatcagcggacagcttgaaattaattaggagtctgattaaaagttaaactactgaagagtttgacaaaatatgctcttaaaattcaccatcttgggggtccttatagaattctgtacctgccaacactcaaggttttaaaagttaaaaagtaaaaatatgtcaaacatggattctcatatcggtaccgtgtgaaacagcccatcgtaattgatggccacgtaattgtgatatgcgcataacgctatcatctgtttgagcactcatggtactatcatatatttgatacacatatctaacttgtctctctcttgtagtcagcttgctgtttagaatattttgattagcattcctttccttgttttattagacaaaagttattaatacaccgtctgatcttcctttgtacttttgttccacagtgctagccaataagaaaattttctgccgcatccatgatacttagagactccactgcttcattgaccaagaaaatatagaagatcaaaggtgtcttgtaggtaggaagcttctgccggttgtttatatattcatcgtttcacctgataattttttttccatgtttgttgggttccgagtgtttttctgcacttgtgtattattctatgctctgataatgattaatagtcatctctcctttcaaaattattttatccatgacacaatttgtttgcttgctgaaatccttttatttttcacttccttaaaggcaaggaagatctaatttaagcgtttcggaaaacattattttaaaaaccattgagacacatgattaatgatcacttcataaatttgtcttattttcagaacttaggtgttaaaaggaatagagtaatctagggaggaataaagcatgggaaaaggagaggtagccactaggtccaaatctcaaaaatcatcggcgacacaggtatgtacaacaatctgaaactacaagactaattactaattagtgaaattctcttaccttgttttgcttgttttagaatgaacagagtacacccactaatcctcctactgcatatccggactggtctcaatttcaggttcataaaatgagttcatcttgcatccatttaactttttccactatattgtttactgtactggttagtatcaatctgtaggcatactataatcctgctgggacagctccaatgaccccaccgggctttttccatccaaatgtggctccaagtcctcaggggcacccatatatgtggggtccacaggtacattcacattaatttcttgctatagatgcagtgttctggtcataccactaccatttctgctgttttatcagaattatgtctagataagtctaagcatgagtgataataagcaaatggtagcatggacctttccgctgcattcatttgagttacccagtccttttaacctttggccttagggttttggtagtttttcttttgtatgaaggatgctgttagctactctgaagctatggaaaatcagttttaacatgtgatgtgaattgctcgtgtcagatgatgcctccctatggaacaccgccgccatatgcggcgatgtatgcgcaagggacaccatatcagcaggcacctatgctaccggtactcactcttacattttacttaatgaaatagtttttgtcatgttatgtgaatagctcttaccaaagaatttcattctaattgtctctataccagggttcacacccatacaatccttatcccgggcaatcaccaaatgggacagttcaaactcctgtaagttcttgggcatcttttatctgctctgtagttgtagaaggcaagaagaatttcatctaatcttttttttttgcttccctgggtcttttagttgtgtccgtttattccagtttcagtgatcttgctgtcaaaattgttgcttatgctatcataatttagctacattttcatgtaaaaattaattggtttgatttgcacctttatttcattacctgtctacttagattagatatgattgtggttgaaaatcatgttgttagacatctgctggcggaacagagacagataagtcaggcaaaagtaagcggaagactcccctgaagagatcgaaaggaagcttaggtaatcttgatgtagttgcaacaaaaaataaaaaggcgcccgcaaaaccttcagcatcctcatccaatgaaggttcttcacacaggtagctccttttcttctgtctctgtgattataatggataaacgctgacttttttttaacatatgatatgcagtgagagcggaagtggaagttcttctgaaggaagcagtacaaattcaaaaagtgtatgtcactctatcataccgctttgttatgttacttcagttacttcatttttctcaccagtacaaattccaaaggcagcatgccttttgttttaccactctggcatcccccccccctactgaaggtcttgtttgtcatgcgcaatatctagagtctaagcctttgtattattgcttacggcacctgtactgaactggtacactatttagaggtgcaagttagttgggtactagggttgcacactggctctgcatattggccatcagaaacccacctagactagttgggttgtacttctcttcaaggttctggatgtttgcaaaataaagatctgcaaagtgcaaatcttgtaataagaggatcccaactgataatgaaacagtctgatttttggtgatactaaaaaaaaatcgaatggtgagcccttctattaaagttcttgaccattcgcatagtcgttagttattagactcgagttgattattctttgctctcgccacatgtgttgtaccctttaataattagtgttgatcgattgttctgaaacccttaggaacttgttttccccaccaaatacttatagtatgtggatcttttttttttttgaaagaatggatcttttttttttgttgcatgcatgtttggtacctttttgtgctgggtgtatccatggttgccactactttcaaaatgcactatagccttctagcctgtgaacaaagtatatggatgcactcaatcctctatgtttttttttttttcctttttgctccttttgcttcatacgatcattttcttgctaacctaagacaaatatgtacaaacaatttgcttgcagggttcaaggacaaaggatggttctgagcatggccagggtaatggtaggattaagaacctctcttttttttatataaaacagtagaattttcaaggaaaatctgtagctcataaaagattctgcaaaaactcatgaatattatagtggtgcaggaggcatgcctgaaaaacattttccgtgttgaaaacacatatggcaaaaatcactgtttagacacaaggtttttaagaaagcaagggcgaggaagtaccatatgcaatcatcatccgttggcatattgggtgtgggtttagatttggattcaaagtggcatatttggtacaagcaaaattttgatgacatattaggaaccgacgaaatttccagtggtatattaggggtttactcctagtatagtactgaacatattctacaacctgccattggtagctttattgaagaataaaattgtgaaactatgcttgtttttgttataagcaattaataaatatattagttaagacaataagaaatttttctcatgtagtaaggattgactgcaatctaattacctttttgtccagatgctagcaacaaaggagctactgctcagagttctgcggttgagcccgtacaagcatctactgggccagttgtgcttaaccctatgatgccatactggcctgtccctcctcccatggctggcccagcaactggtgtaaacatgggaatggattactggggtactcctacttcagtacccatgcataataaagttattgcagcaccagcatcagctccttcatcaaactctcgtgatgttgttctcagtgatccagccatacaggtttattgctgtgcaggatttgtttcttgtttttgctgtgttacaggaaccaaccttgcaatttccttagggctgtattttatttttaatgcaggatgagcgagaactgaagagacaaaagcggaagcaatcaaatagggaatcagctcgacgttcaagattacgcaagcaggtctgtagtttctgcaccagtctgcatggatttggctgtcgtttgctgttcttattatctttgggtagtctgtgtttctgtaaacaactaatccataagaggccaacttggattcaacctaatcagcagtgaattttgataaggttgaacctatttgaattgaccgcagacgggaataatacttaaatatacatagcctgtatggcatgcatgcgcgcatgcacgctatgctagagcccaggatattgatggtgctttaaatgaattttcttttatggatggtttgaccagaatctgaactgaacaatatgtttgaagatattagcttggcagtccattggatcataattcaaagctgattttgaattgtagaggattttcattactcattacccagctctcttttcatgattgctaaagacaagtaaaaaattacccaaattattcttaaaacatcaaactttgaaattcaaactgcttaggattacaacccaattgttgttgaaccagtaccttattagtcgagtgagtataatttaccgcacttcaatgacaatccagtgagtcgcaaaattggcaactacatttttgactggtgtagagagatgttttctaacttcttgagatacatctttaaaatacacactatatttgttttaaaagtcatggatatataagcaagcatgggaaacaacctcccaatacaatattaggttgactgcagatattcttgatcaattctcttttggtgatataagggtggattggttctttttcttcttttttttttttggttctcggcttctcgcatacatatcattgtccatttgttaacttaagaatgtatggttcgtcttagggttctcagcttgttgtatcactagtatactccctccgttttcctatatgatgttgtttcgttcatttttgaactaaccaacagcatataaaaaaaaatggggggagtattttttttgaggagtccattactagtgtactattttatcaaccgtatctccttttactgctatgggtagtcaaactgttgcaggtgctggttacacctagttattccaatgctggatgtatatgaccagggttaaataagcaatgcaatgttatttttgcggtatttttttttataaatttactattaaccttccttttgatgatatatatgttgtaacaaatgaaatactacaggctgaatgggaggaagtagccaatcgagctgatttgctaaagcaggaaaacagctcacttaaggaagaattgaaacaacttcaggagaagtgcaatagcttgacctcagaaaatacaactttacatgtaagatttgtgttcttctgttgtcctacacttcccataatgtgcagtagacaatagttactatttttagtttgctgcaaataagaaagtggatcaagggcaaaacatactaggggattacccaatcctcacaggctgttacttccaacgcattggttcactgataactacccctgaagtcctgaacccatcttcttttagacgtttggagttaacatttcattctttactttgaaatttatttgaggcatttttaatgattgtaggaaaagcttaaagagcttgaaggcgagaaatcaaatggaaactggtataaagagtgaaaagctgtaacttatcactttctgacttctgatgtaaggaataattacttggagctaccattgctattacagagtacatattcttaaaattttgttgtaactttcttgaattttcagataaattggaggcgacatggtaggtccgataattaggaggtattcatgtatgctattagatttttggccgagaggtagaattgtatcataggatttgacatgatggctacagattcttcttccagttgccgcggctgctgtactctatgcttttttttttctgcacttgtgtaagattctacgaagtaccatgtaaaagtccccaagtgatgtttgaaactctgggggttagcttctgagatagttgatgtagagctgctcattgagcgtctttacctgaattgatgtgtgtcacagttatagtttgtgacttatcattcagataattagaggcacaaatttgtataatgtactaacgggtcgtgataaggaaattttgttgcattttgct</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001056041.1 RefSeq:Os03g0239400]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 3]]
 
[[Category:Chromosome 3]]
 

Latest revision as of 06:55, 24 February 2017

The rice Os03g0239400 was reported as OsbZIP26 in 2008 [1] by researchers from India.

Annotated Information

Gene Symbol

  • Os03g0239400 <=> OsbZIP26,OsbZIP, bZIP26

Function

  • The basic leucine (Leu) zipper (bZIP) proteins compose a family of transcriptional regulators present exclusively in eukaryotes.
  • The OsbZIP proteins characteristically harbor a bZIP domain composed of two structural features: a DNA-binding basic region and the Leu zipper dimerization region.
  • bZIP proteins have been shown to regulate diverse plant-specific phenomena, including seed maturation and germination, floral induction and development, and photomorphogenesis, and are also involved in stress and hormone signaling.

Expression

  • The researchers from India find specific or coexpression patterns of rice bZIP transcription factors starting from floral transition to various stages of panicle and seed development.
  • bZIP transcription factor-encoding genes in rice also displayed differential expression patterns in rice seedlings in response to abiotic stress and light irradiation.

Evolution

  • The phylogenetic relationship among rice bZIP domains as well as with bZIP domains from other plant bZIP factors suggests that homologous bZIP domains exist in plants.
  • Similar intron/exon structural patterns were observed in the basic and hinge regions of their bZIP domains.
  • Detailed sequence analysis has been done to identify additional conserved motifs outside the bZIP domain and to predict their DNA-binding site specificity as well as dimerization properties, which has helped classify them into different groups and subfamilies, respectively.


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Labs working on this gene

  • Interdisciplinary Centre for Plant Genomics and Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi 110021, India

References

  1. Nijhawan A, Jain M, Tyagi AK, Khurana JP. Genomic survey and gene expression analysis of the basic leucine zipper transcription factor family in rice. Plant Physiol. 2008 Feb;146(2):333-50. PubMed PMID: 18065552; PubMed Central PMCID: PMC2245831.


Structured Information