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| − | Please input one-sentence summary here.
| + | The rice '''''Os08g0127100''''' was reported as '''''OsAAT63''''' in 2012 <ref name="ref1" /> by researchers from China. |
| | | | |
| | ==Annotated Information== | | ==Annotated Information== |
| | + | ===Gene Symbol=== |
| | + | *'''''Os08g0127100''''' '''<=>''' '''''OsAAT63,AAT63''''' |
| | ===Function=== | | ===Function=== |
| − | Please input function information here.
| + | * Amino acid transporters (AATs) are the integral membrane proteins which mediate the transport of amino acids across cellular membranes in higher plants, and play an indispensable role in various processes of plant growth and development, including long distance amino acid transport, response to pathogen and abiotic stresses <ref name="ref1" /> <ref name="ref2" /> . |
| − | | |
| | ===Expression=== | | ===Expression=== |
| − | Please input expression information here.
| + | * Diverse expression patterns of '''''OsAAT''''' genes indicated diverse biological functions of the amino acid transporters and the important roles of OsAAT genes in N uptake, metabolism and distribution during N starvation. |
| − | | |
| | ===Evolution=== | | ===Evolution=== |
| − | Please input evolution information here.
| + | * The increase in the number of OsAAT members reflects that expansion and rearrangement of the genome may be successfully undergone in the '''''OsAAT''''' family, and these transporters increased in rice might play an important role in order to adapt to specific functions. |
| − | | + | <br> |
| − | You can also add sub-section(s) at will. | + | '''''You can also add sub-section(s) at will.''''' |
| | | | |
| | ==Labs working on this gene== | | ==Labs working on this gene== |
| − | Please input related labs here.
| + | * National Key Laboratory of Crop Genetic Improvement,Huazhong Agricultural University, Wuhan 430070, China |
| | | | |
| | ==References== | | ==References== |
| − | Please input cited references here.
| + | <references> |
| | + | * <ref name="ref1"> |
| | + | Lu, Y., Song, Z., Lü, K., Lian, X., & Cai, H. (2012). Molecular characterization, expression and functional analysis of the amino acid transporter gene family (OsAATs) in rice. Acta physiologiae plantarum, 34(5), 1943-1962. |
| | + | </ref> |
| | + | * <ref name="ref2"> |
| | + | Zhao H, Ma H, Yu L, Wang X, Zhao J. Genome-wide survey and expression analysis |
| | + | of amino acid transporter gene family in rice (Oryza sativa L.). PLoS One. |
| | + | 2012;7(11):e49210. doi: 10.1371/journal.pone.0049210. PubMed PMID: 23166615; |
| | + | PubMed Central PMCID: PMC3499563. |
| | + | </ref> |
| | + | |
| | + | </references> |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 8]] |
| − | GeneName = Os08g0127100|
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| − | Description = Amino acid transporter, transmembrane family protein|
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| − | Version = NM_001067436.1 GI:115474608 GeneID:4344567|
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| − | Length = 5141 bp|
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| − | Definition = Oryza sativa Japonica Group Os08g0127100, complete gene.|
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| − | Source = Oryza sativa Japonica Group
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| − | | |
| − | ORGANISM Oryza sativa Japonica Group
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| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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| − | clade; Ehrhartoideae; Oryzeae; Oryza.
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| − | |
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| − | Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|
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| − | AP = Chromosome 8:1560756..1565896|
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| − | CDS = 1560931..1560969,1563948..1564102,1564195..1565084,1565175..1565266,1565365..1565433<br>,1565565..1565663|
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| − | GCID = <gbrowseImage1>
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| − | name=NC_008401:1560756..1565896
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| − | source=RiceChromosome08
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| − | preset=GeneLocation
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| − | </gbrowseImage1>|
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| − | GSID = <gbrowseImage2>
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| − | name=NC_008401:1560756..1565896
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| − | source=RiceChromosome08
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| − | preset=GeneLocation
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| − | </gbrowseImage2>|
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| − | CDNA = <cdnaseq>atggggactcaggtggcagataactacccaccggccaaggatggccggagcgcgcaggagaaggcgatcgacgactggcttcccatcacgtcgtccaggaacgccaagtggtggtactccgccttccacaatgtcaccgccatggtcggcgccggcgtcctcagcctcccctacgccatgtccgagctcggctggggacctggcatcgcggtgctgatcctgtcatggatcatcacgctctacacgctgtggcagatggtggagatgcacgagatggtgcccgggaagcggttcgacaggtaccacgagctcgggcagcacgcgttcggcgagaagctgggcctctggatcgtggtgccgcagcagctcgtcgtcgaggtcggcgtcaacatcgtgtacatggtcaccggcggcaagtcgctgaagaagttccacgacgtgctctgcgagggccacggctgcaagaacatcaagctcacctacttcatcatgatcttcgcctccgtccacttcgtcctctcgcagctcccaaacttcaactccatctccggcgtgtccctcgccgccgccgtcatgtcgctcagctactccaccatcgcgtggggcgcgtcggtggacaaggggaaggtggccgacgtcgactaccacctgcgcgccacgacgtcgacggggaaggtgttcggcttcttcagcgcgctgggcgacgtcgcgttcgcgtacgcggggcacaacgtggtgctggagatccaggcgaccatcccgtcgacgccggagaagccgtccaagaagccgatgtggaagggcgtcgtcgtcgcctacatcatcgtcgcgctctgctacttccccgtggcgctcgtcggatactgggcgttcggcaaccacgtcgacgacaacatcctcatcacgctctccaggcccaaatggctcatcgcgctcgcaaacatgatggtcgtcatccatgtcatcgggagctaccagatctacgccatgccggtgttcgacatgatcgagaccgtgctcgtcaagaagctcagattccctcccggcctcacgcttcgcctcatcgcaagaacactctacgttgcgttcaccatgttcatcgcgatcaccttcccgttcttcggtggattgcttgggttcttcggtggattcgccttcgcgccaactacttacttccttccctgcatcatgtggctagcaatctacaagccaagaaggttcagtctctcatggttcaccaactggatctgcatcattcttggagtgatgctcatgatcctgtcaccaatcggaggactccggcagatcatcatagatgccaagacatacaagttctactcgtag</cdnaseq>|
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| − | AA = <aaseq>MGTQVADNYPPAKDGRSAQEKAIDDWLPITSSRNAKWWYSAFHN VTAMVGAGVLSLPYAMSELGWGPGIAVLILSWIITLYTLWQMVEMHEMVPGKRFDRYH ELGQHAFGEKLGLWIVVPQQLVVEVGVNIVYMVTGGKSLKKFHDVLCEGHGCKNIKLT YFIMIFASVHFVLSQLPNFNSISGVSLAAAVMSLSYSTIAWGASVDKGKVADVDYHLR ATTSTGKVFGFFSALGDVAFAYAGHNVVLEIQATIPSTPEKPSKKPMWKGVVVAYIIV ALCYFPVALVGYWAFGNHVDDNILITLSRPKWLIALANMMVVIHVIGSYQIYAMPVFD MIETVLVKKLRFPPGLTLRLIARTLYVAFTMFIAITFPFFGGLLGFFGGFAFAPTTYF LPCIMWLAIYKPRRFSLSWFTNWICIILGVMLMILSPIGGLRQIIIDAKTYKFYS</aaseq>|
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| − | DNA = <dnaseqindica>176..214#3193..3347#3440..4329#4420..4511#4610..4678#4810..4908#gggcttaataatcttcttcctcttgttcttctataagtagagacttggcgactctgatctgccggcctccttgcagcaacccttcttcttcttcttcttcttcttcttcttcctctgatcctccattgctgcaaaagaagaagaggtagacgaaggaggaggagatcaggtgatcatggggactcaggtggcagataactacccaccggccaaggtatttgtttgttcatcagcatccatctctgtttctctctgtctgtctccattggagatcgatgtgtgtttctgaacttgttgtttgtgttcttcatcttgatctttcgtcggtagtcttgttaatttatccaaataaaagaagaagaaaaaacaacaaccaaaagggttttttctttctttctaggaccgtttctctatgaaaagatgatcggcagcgttgttttgctttttcaaaaataaacggaaagaattaaagatcaaattaaatttggaggagttttcatgtcgagctgcgagaagccgggagggcatgaaatggacaagcaaagagttggtcatgccgtcgttgattcagttgatgaaaagggaacatttttgagatacctttgcacacgagaaaggtagagttcaaaaagtgttgttttggactcctttttcatggaggattctctcctttgccggcatcgcaacaccaatcggaggaccccaccttgcagcctcttggcagcacctgtctagttgtcctagttcatcttcttcatgtgaaaatggagatcgattgcagctcgttctcactcctttttctcacctttttcttcttcttcattgaacacaaacatatgaggaacagtatatatatttacctatcatatcataggatcggtgtggtttcagtactttgccttaactgcagaattgtttttaaaaatcctctgttttcgaaaagatattgtttacaggctgtttgtactatatccctaccactctgttcttcagtgttcagctgtaagagtcagaattctcactgaatttcttaccatggtcagaagtcagaactgcactattttttcttgcagaaatttcttttccttagccttttagaaattaaatgcactacatagaaaggtactaactggaaataaaagtgtctccttcacatggtcgctgtcttgtttggcctattgagaaatccttgttactgcacagtacactgacagttctatatttcgctttagcttccaagaccagcaattcctatcagaaaaaaaacacctatcacatggaaaattttccaagaaattgttatgtttggctggcaatgaattttcttttttgttataaataacagctgcccatgctaggatctgtccgtggccatactgtatgacactgtagcccatctgggacgcggattcttatatatatatatatatatatatatatatatatatataatatttttaggattaactccagatgatggagagagacatttttaggaatttccatagcccaaaaaggtataggaaagcattattttggaagactattttattctatggagtacattggaatagtcatcagtttctggcaaacttctgataacataaaaattacagttaacgaggggtcaagctggattagtataattacccatatggtgagcacgacaaattgattaacccaaacagattggctggacacaaactccaataacaaggctgcaagatgttagttaaaagatcgggtgttatcttaaaataaaaagttaaaagattgggtatattagaagcaagttgttactagtctgaagaaatttggtgttctctgctctagttttcaagtcctgtcttaagaatcaaaactttgtaatctcagcctagttttgtatccccaaatcattattagataatcatgcatcactctaagtgtgctctacttgatataaaagtattactgtcgttaggtgagcttggcgtggtaggtaaaaaaaatttctatcctcctgaggtgtcattgataagcatcagatagctcatagcattgactctattgcaaagtggccatgtgataaagtcaactgccaataagaaaataaatcactagttcagtctcatgtttgcattataattttcaaacatggcgtgtcattgaattgaaaagtcctgccactgatctgtcacttgtctattagtgttgtgattgtatgaagattttttttaagataatctaacttgcctccacagtccatggtggagctttgaaaatcatgccccttgattagtgagttttttattctgacaaaatatatttgcatctctcaatggataaatccgacaaaataaaagaaagaatcaatacacataagtatccattctaaacctagtcattttgctctccttaaaaatatatatgtgcagagtctcaacctataaatcattgaaaaaaaaaaagaaagcatcaatacagataattatctattctaaacttagatattttgttcttcttaaaaataaaaaaatatatttgcaaagtctcaactgataaatcatactccataatttatcaaatgatatatatgtttgttctacaaatatttatacaaaacacctatcctataggaattctactataggataagtaaagcatcaacacataattatccattctaaacttagccatttttgttctccttgaaaacaaatatataaatttgcaaagtctcgcttgataaatcagacagaaaaagaaagcatgaacgcgcataattatccgttctaaacttagccaggcattcaagaattaaaggtttacagaattggcgacgacgttatagcacattgaaaagtattaaaagcattactcgaatgattcgaaatctcgattttcaaaaaacgtaagaatagaaactttgaaatggcgaattattggcccaacaaagatattccgtttatgggacaacttgctacttttccatgttgctaaaaaccgaaagtgaaaaatgcgaaacaatttgggaaaaatttcccgattcggcgtacatattgatgtataaagaagagccgaattcttcagaacaagaagaagaacaaacctttcttgcatagagtgtagtctgtactagtactgttgagatcaaccatctgtagcaaagtagcaagcttgaattaatcaatggcgaaacaatggtggcaggatggccggagcgcgcaggagaaggcgatcgacgactggcttcccatcacgtcgtccaggaacgccaagtggtggtactccgccttccacaatgtcaccgccatggtcggcgccggcgtcctcagcctcccctacgccatgtccgagctcggctggtcagtcctactatcttcttcatcttcatctgaacgaagaacacacgaacgaaccaagaaattaatctaactgaattcttgaatttttgcaggggacctggcatcgcggtgctgatcctgtcatggatcatcacgctctacacgctgtggcagatggtggagatgcacgagatggtgcccgggaagcggttcgacaggtaccacgagctcgggcagcacgcgttcggcgagaagctgggcctctggatcgtggtgccgcagcagctcgtcgtcgaggtcggcgtcaacatcgtgtacatggtcaccggcggcaagtcgctgaagaagttccacgacgtgctctgcgagggccacggctgcaagaacatcaagctcacctacttcatcatgatcttcgcctccgtccacttcgtcctctcgcagctcccaaacttcaactccatctccggcgtgtccctcgccgccgccgtcatgtcgctcagctactccaccatcgcgtggggcgcgtcggtggacaaggggaaggtggccgacgtcgactaccacctgcgcgccacgacgtcgacggggaaggtgttcggcttcttcagcgcgctgggcgacgtcgcgttcgcgtacgcggggcacaacgtggtgctggagatccaggcgaccatcccgtcgacgccggagaagccgtccaagaagccgatgtggaagggcgtcgtcgtcgcctacatcatcgtcgcgctctgctacttccccgtggcgctcgtcggatactgggcgttcggcaaccacgtcgacgacaacatcctcatcacgctctccaggcccaaatggctcatcgcgctcgcaaacatgatggtcgtcatccatgtcatcgggagctaccagatctacgccatgccggtgttcgacatgatcgagaccgtgctcgtcaagaagctcagattccctcccggcctcacgcttcgcctcatcgcaagaacactctacgttggtaagcactgttcaagtgttcatcatctgaacttaactgaattttttattagatcttggcatggctgaaactgatctggaatctgtgcagcgttcaccatgttcatcgcgatcaccttcccgttcttcggtggattgcttgggttcttcggtggattcgccttcgcgccaactacttacttcgtaagttttccattgatcatttcgttttgatgggtgagagtctgagagatgatcagagttcagaactgacggttatttttttctgtgttctttggcagcttccctgcatcatgtggctagcaatctacaagccaagaaggttcagtctctcatggttcaccaactgggtaagaacacacaaactaattatgctctgtttttcttcaatcttctcccctgtttttgtctgaaatgaaaatgcctctgcttgatcttgcattctgatctgatttgtttttttcaactgattctctttcagatctgcatcattcttggagtgatgctcatgatcctgtcaccaatcggaggactccggcagatcatcatagatgccaagacatacaagttctactcgtagattacatgttcatcatagtaatctcatgtggctgcaagttcaagttctactcataggcacacatgatgaaaccagttactgcaaaagttttttttttagccaacaaaggaagaagaaagttcaacaccaagttcatacattgtcactacgacgatgatcttttgagacgtgtcatgcatgcatcagtcgttaattatgtgacttaattaaaaacaaagaggttgtgtttgtgc</dnaseqindica>|
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| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001067436.1 RefSeq:Os08g0127100]|
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| − | }}
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| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
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| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 8]]
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| − | [[Category:Chromosome 8]]
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