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| − | {{JaponicaGene|
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| − | GeneName = Os04g0442300|
| |
| − | Description = Similar to ZmRR2 protein (Response regulator 2)|
| |
| − | Version = NM_001059417.1 GI:115458563 GeneID:4335937|
| |
| − | Length = 3849 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os04g0442300, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| | | | |
| − | ORGANISM Oryza sativa Japonica Group
| + | ==Annotated Information== |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| + | ===Function=== |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| + | * Cytokinin is known to have negative effects on de novo auxin-induced root formation. However, the regulatory mechanisms of root initiation by both cytokinin and auxin are poorly understood. |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| + | |
| − | |
| + | ===Expression=== |
| − | Chromosome = [[:category:Japonica Chromosome 4|Chromosome 4]]|
| + | Please input expression information here. |
| − | AP = Chromosome 4:22046053..22049901|
| + | |
| − | CDS = 22046801..22046943,22047077..22047306,22048026..22048096,22048252..22048329,22048870..22048931<br>,22049426..22049537|
| + | ===Evolution=== |
| − | GCID = <gbrowseImage1>
| + | Please input evolution information here. |
| − | name=NC_008397:22046053..22049901
| + | |
| − | source=RiceChromosome04
| + | You can also add sub-section(s) at will. |
| − | preset=GeneLocation
| + | |
| − | </gbrowseImage1>|
| + | ==Labs working on this gene== |
| − | GSID = <gbrowseImage2>
| + | |
| − | name=NC_008397:22046053..22049901
| + | |
| − | source=RiceChromosome04
| + | ==References== |
| − | preset=GeneLocation
| + | <references> |
| − | </gbrowseImage2>| | + | * <ref name="ref1"> |
| − | CDNA = <cdnaseq>atggaaggaggaaggggggtgacgagggtgctgctggtggacgactcgccggtggacaggagggtggtgcagctcctcctcagcagcagcgcatgcgccggctcattccacgtaatcgccgtcgacagcgccaagaaggccatggagttcctcggcctcaaggaagaaggcaaggagcaggccatcgacatggtgctcaccgactactgcatgcctgagatgactggttatgagcttctcaaagccatcaaggcgctgagccctctgaagccgatcccagtgatcgtcatgtcgtcggaaaacgagccccagaggatcagcagatgcatgaatgctggtgctgaagatttcatcgtaaagcctcttcaaagcaaggacgtacagcgtctcaggaactgctcgccggcgaacacgcagtgctgcgacgccgggagcgacggcaagccgccgctgctgctgctgccatcggaccacgtcgtcgtcgacgccaccgccgcgtcgccgccgccgccgccgtcccggcgtcgggcgcacttcgctggagttgccatggtcctgcactcgtcgagcgtcgagctgtcacattacttccctttcctcttcaagttcatcctgctggtgtacgccatcctgtgcctgggtgagctgctgcacagatggtcaaacggctgcttcctcaacctgtggtgtgcttga</cdnaseq>|
| + | Kitomi Y, Ito H, Hobo T, Aya K, Kitano H, Inukai Y. The auxin responsive |
| − | AA = <aaseq>MEGGRGVTRVLLVDDSPVDRRVVQLLLSSSACAGSFHVIAVDSA KKAMEFLGLKEEGKEQAIDMVLTDYCMPEMTGYELLKAIKALSPLKPIPVIVMSSENE PQRISRCMNAGAEDFIVKPLQSKDVQRLRNCSPANTQCCDAGSDGKPPLLLLPSDHVV VDATAASPPPPPSRRRAHFAGVAMVLHSSSVELSHYFPFLFKFILLVYAILCLGELLH RWSNGCFLNLWCA</aaseq>|
| + | AP2/ERF transcription factor CROWN ROOTLESS5 is involved in crown root initiation |
| − | DNA = <dnaseqindica>2959..3101#2596..2825#1806..1876#1573..1650#971..1032#365..476#actctcttcttcctctcctcatcagtcctcacggtctctctcgctcgctcacgcagtctctcaccacgactctcacgacctccccctgacctgacccagaggagcaggagagagcatagcacggcctgcacggatcgagcagcggcagcaggagctcgtcgcctctgcttaaaccccccccccccccccaatatcggtctctcgccttgtcaccttacttgcttggctactactacttcacaacgcacagctggttggttggttggattagctagctactaggatcagtgcttcgcttctctctctctttgcgttgccgtcgtcgtcgccgctggtggtggtggtggttgttggtgagggagagatggaaggaggaaggggggtgacgagggtgctgctggtggacgactcgccggtggacaggagggtggtgcagctcctcctcagcagcagcgcatgcgccggctcattccacggtcagtcatctcagctcatctcatcccctcctcgattcttcatttcttcttctcggcagtgtaagcttggctgctgcttgcttgttcatctctctgtgtctccattcgttttctggaattctctctctctctctctctctctgcttcttcttcttccatggcttccaaccgcaattccgggctcgttttttcccccattctcctttgttatgcttatactccattgttttagttttcatcataaactgatgctttttttgacccctgatgagtatgcataagctgtgacacaactgcaatctctcctcgactctgttttttctttttttttttgttctcccgttctttgttttcccttgccggtggtgtttttgggttcgtgtgcaagaaacagatgcaccctgctgctgttgctgctgctcaaactctagtcttgaactcttgacttgcgactaataatctgaaagactgaaactcggctcaatttcgtgcagtaatcgccgtcgacagcgccaagaaggccatggagttcctcggcctcaaggaagaaggcaaggtaaaaaaaaaaaaaaaagtctctgctaatcataccacttaaaccaacgccattaccgtccataatcgccgccgatgccctgctgctgctgcaagcctgcaagaaacgaggatcagatcattaacaaatggcgacgccatttttgttttcctcctctcgccggcggcgctgcaccgccggccgtacgccggccgtacggcgcgcgtgcgcgcgtgagggtttctgttcctcctcgtctccgccttttgggagcaaaaggtggcctcttttcatgggggagagagacatgcagaggaagaagaaaaaaaatactactaaaaaagagagaaaaactcgccgtcttacagcagcctgacagagctgtctggtgtcttgatgacaccaagcttgggttaatgggattggttaatggcatgggtttgattcttggtgtgccctgtgagctcaacacaggagtggtagtgacacggctgggtgtaattacagctaaccaggatgtgattggatggctaaataaactctttttaatatcatgtgcaggagcaggccatcgacatggtgctcaccgactactgcatgcctgagatgactggttatgagcttctcaaagccatcaaggtaaaataaatacaaatactgttaatgcagaaattcagacttgcgctgttgctactactattttggtgtccctagtactaattagcagtagtagtgattagttccagtaataacctgatgtgtgattggctcatggcttcattggatgtttgcaggcgctgagccctctgaagccgatcccagtgatcgtcatgtcgtcggaaaacgagccccagaggatcagcaggtgaggcagagaggctttcatcctttttctttcttttttccttcagcatctgtttctgtgcaagtaaaaaaaaaaaggggagctgtcttaatttggtcccaatacctctgcctgctgcacaataggagtacactgtaccgagtgtacaactgagtagcgaactgtacatacgtatggctatatacatccatccatttaaaaagcttcatagatttgtactccctctatcgtattttaagtgtagccatactttttcatactcaactttaatcatctgtcttatttaaaaaaaaattaaaaaaatttaaaaacataagtcatgcataaagtaccattcatgttttatcatctcataacaacaaaaatactaattataacaaatttttaaataagacgaacgatcaaagttagacacgaaaatttatagttgcatttaaaatataaccgaggaagtggaagagaaataataatgcttcagtaaataccccatcttggcctgttcatgtacttgccttcccattatgatccgcactttggtcgaatgggcgttcgacctctgagaagatgctgtatcagatacagagatccacgacatttgtgtggttcattgattgctgtctcgtgatctctgatatcctgttagtactgtactagtactgctgtgatcctgcagtataagaagattttttttcttaaaaaaaatctttttctaaacacagatgcatgaatgctggtgctgaagatttcatcgtaaagcctcttcaaagcaaggacgtacagcgtctcaggaactgctcgccggcgaacacgcagtgctgcgacgccgggagcgacggcaagccgccgctgctgctgctgccatcggaccacgtcgtcgtcgacgccaccgccgcgtcgccgccgccgccgccgtcccggcgtcgggcgcacttcgctggagttgccatggcaagtccccccctcatgcactgcatatgctatactcaaccacctgcattgtcgtcacctgttgccatcggagagttttacaagaaagagaaccatcgcctcaatttgcttgccgctgcgttttctctttcaggtcctgcactcgtcgagcgtcgagctgtcacattacttccctttcctcttcaagttcatcctgctggtgtacgccatcctgtgcctgggtgagctgctgcacagatggtcaaacggctgcttcctcaacctgtggtgtgcttgacgaatgaagcaaccggtgcagtccaaatgcaaaggcaggctgcaactggcaaagctctttcttgtttgcgatagctttctgcactgaaagagcagcatggagaggaggttaatgttacaacagatgatgatgatgatgatggaagttttaggtagattgtttgctttgagattctaacctggagcttggttcttcttggcctttgattgatgagaggagggaggaagaaccaatccttgtatccttgtacaaaaagcataatgaggcagtatctgatgtcctttttggttgggatcttggctgatatgtcgatgtgacattcagagagctttttccttgccctttcctttcgccgatggcaactcctcacctgtattgtagttcagatcccatgagaaaagaactacacaagttgactaatgcagcatcaggttcttctgatgggaaaagaaacaaaaattgcagatatcatagtacactttcgcctcaacggttgtaaacttgtaatcccattcagataggcgaaactgggcaatagaatgttgttttttctttcagttgtcacatttcaagctaatgacttgagatttttaaatgacagctatttacaagcctagtaatgtacaactgtgggtttacatattcacagtatcatctccttgtggaggcatgggatcacccatatttttgctacttccacatcttgagtcatgaacatattcatagctgtaagttcctttgatgttct</dnaseqindica>|
| + | in rice through the induction of OsRR1, a type-A response regulator of cytokinin |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001059417.1 RefSeq:Os04g0442300]|
| + | signaling. Plant J. 2011 Aug;67(3):472-84. doi: 10.1111/j.1365-313X.2011.04610.x. |
| − | }}
| + | PubMed PMID: 21481033. |
| − | [[Category:Genes]] | + | </ref> |
| − | [[Category:Japonica mRNA]]
| + | </references> |
| − | [[Category:Oryza Sativa Japonica Group]] | + | |
| − | [[Category:Japonica Genes]] | + | ==Structured Information== |
| − | [[Category:Japonica Chromosome 4]]
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]] |
| − | [[Category:Chromosome 4]]
| |
