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| − | {{JaponicaGene|
| + | The rice '''''Os03g0727000''''' was reported as '''''OSH1''''' in 1996 <ref name="ref1" /> by researchers from Japan. |
| − | GeneName = Os03g0727000|
| |
| − | Description = Similar to Homeobox protein OSH1|
| |
| − | Version = NM_001057674.1 GI:115455076 GeneID:4333973|
| |
| − | Length = 9519 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os03g0727000, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| | | | |
| − | ORGANISM Oryza sativa Japonica Group
| + | ==Annotated Information== |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| + | ===Gene Symbol=== |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| + | *'''''Os03g0727000''''' '''''<=>''''' '''''OSKN1, Oskn1, OsKN1, OSH1/Oskn1, HB75''''' |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| + | |
| − | |
| + | ===Function=== |
| − | Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
| + | * Homeobox genes encode a large family of homeodomain proteins that play a key role in the pattern formation of animal embryos. |
| − | AP = Chromosome 3:30358195..30367713|
| + | * By analogy, homeobox genes in plants are thought to mediate important processes in their embryogenesis. |
| − | CDS = 30358559..30358765,30359844..30360076,30366757..30366901,30366987..30366989|
| + | * '''''OSH1''''' is not directly associated with organ differentiation, but may be related to a regulatory process before or independent of the organ determination. |
| − | GCID = <gbrowseImage1>
| + | * '''''OSH1''''' plays an important role in regionalization of cell identity during early embryogenesis. |
| − | name=NC_008396:30358195..30367713
| + | |
| − | source=RiceChromosome03
| + | ===Expression=== |
| − | preset=GeneLocation
| + | * In situ hybridization analysis revealed that in the wild-type embryo, '''''OSH1''''' was first expressed at the globular stage, much earlier than organogenesis started, in a ventral region where shoot apical meristem and epiblast would later develop. |
| − | </gbrowseImage1>|
| + | * This localized expression of '''''OSH1''''' indicates that the cellular differentiation has already occurred at this stage. |
| − | GSID = <gbrowseImage2>
| + | * At later stages after organogenesis had initiated, '''''OSH1''''' expression was observed in shoot apical meristem [except in the Li (tunica) layer], epiblast, radicle, and their intervening tissues in descending strength of expression level with embryonic maturation. |
| − | name=NC_008396:30358195..30367713
| + | |
| − | source=RiceChromosome03
| + | You can also add sub-section(s) at will. |
| − | preset=GeneLocation
| + | |
| − | </gbrowseImage2>| | + | ==Labs working on this gene== |
| − | CDNA = <cdnaseq>atggaggcgtaccacgagatgctggtgaagtacagggaggagctgacgaggccgctgcaggaggccatggagttcttgaggagggtggagacgcagctcaacacgctctccatctccggcagatcgcttcgcaatatcctttcctccggctcttctgaggaggaccaagaaggtagcggaggagagacagagctacctgagattgatgcacatggtgtggatcaggagctcaagcaccatttgctgaagaagtacagtggatacctgagctccctgaagcaagaactgtcaaagaagaagaaaaaagggaagctccccaaggatgctcgtcaacagctcctcaactggtgggagctgcactacaaatggccttacccctcggagagtcagaaggtggcactggcggagtcgacggggctggacctgaagcagatcaacaactggttcatcaaccagaggaagcggcactggaagccctccgacgagatgcagttcgtgatgatggacggctaccacccgaccaacgccgccgccttctacatggacggccacttcatcaacgacggcggcctctacaggctcggctag</cdnaseq>|
| + | * Nagoya University, BioScience Center, Chikusa, Nagoya 464-01, Japan; the Faculty of Agriculture, University of Tokyo, Tokyo 113, Japan; |
| − | AA = <aaseq>MEAYHEMLVKYREELTRPLQEAMEFLRRVETQLNTLSISGRSLR NILSSGSSEEDQEGSGGETELPEIDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKK GKLPKDARQQLLNWWELHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPS DEMQFVMMDGYHPTNAAAFYMDGHFINDGGLYRLG</aaseq>|
| + | * Agrobiological Resources, Tsukuba, Ibaraki 305, Japan; |
| − | DNA = <dnaseqindica>8949..9155#7638..7870#813..957#725..727#aggagagctcgatcgctgcaccaatacttcactggagatcgcctagctgcagctagctagcttatcctgcgtgtcttgagcttctctcatggaggagatctcccaccacttcggggtcgtcggagccagcggcgtccatggcggccaccagcatcagcatcaccaccacccgtggggttcttccctgagcgccatcgtcgcgccgccgccgccgccgcagctgcagcagcagcagacgcaggccggcggcatggcgcacacgccgctcacgctgaacacggcggcggcggcggtcggcaacccggtgctgcagctggcgaacggcagcctgctcgacgcgtgcggcaaggcgaaggaggcgtcggcgtcggcgtcgtacgccgccgacgtggaggccatcaaggccaagatcatctcccacccccactactcctccctcctcgccgcctacctcgactgccagaaggcaagtcccacacacatgtggtagcctagctagctacctccatgcatgcatgctctcgccgccgcgcgcatctcctacatgatctcatgtcaagctcgctctcagcttacatagcgtatgtgtcgtggtgggttgcaggttggggcgccgccggaggtggcggcgaggctgacggcggtggcgcaggacctggagcttcgccagcgcacggcgctcggcgtcctcggcgccgccacggagccggagctggaccagttcatggtgagctcgcaatctctcactctctttgttgctcgccttcctcttcgatatcttgagctcgctcgccggcggcgtgcgtgtgcaggaggcgtaccacgagatgctggtgaagtacagggaggagctgacgaggccgctgcaggaggccatggagttcttgaggagggtggagacgcagctcaacacgctctccatctccggcagatcgcttcgcaatatcctttcctccggtaacacaacacatccatccatccttccatcttcttctatccatgtactaatccattgcatgtcatcttcttcgatcgatctgctggtttatatcacggtttcatcggctttgttcttgctgtcccttttgtccatttgattcgatctatttgctggtttgctgacggtttgatttggtctatttcttgcatctaccatgtgtgatttctgggccaggaaaaacgcatctgtgtgttcatgtcttttttttcctcgtacatgcatgcgtgtcagtgaaccctgcagatgatctggtctgctggctcggtgtttggtgctctaaatcccgcaagttctcatcagggtttccaaaagattcttttcccctgattgcttttcttggccatgcatgtgggattcttccatctgggcttctaccgctgatcatttcttctgttgggaaggaatagtagtcaccggcacatgtgcatctcagtgttcagtgcagctactagcacactgacgattttgtggtctggctcttcagatatctcctgatgtttttgctatatttaaaatcgataccctgattagaaaaagattaagctaaagagtttaagtacatttcgcaaaacctggggattcgggacattcgtaacattatctggggtagtgctaaacatttttgccccaaatcttaagtttcttgaaataaactgcagaaccttggggtttttacattatagatatcccaatacctagggttttcggaaattaataaatctactgtaagctaaatcattctaaaatcatagtacatcttcatctccatcttcatcttgaggaataatatgtccctaatatcattgaggttctcccttgggttctcttggcgtttatgcaactcttttatttttttttagataatggaaaattttatatactatgcctctcatgccggcagctggttgagtttcgattccctttctgaaagaacatgtgcatgtgactctcccgagtagagagaagaagttctttggctcagccacatcttttccccgggatggaaacaaaggcggtggtgatgagaggagtccgtccttaccatgttcttcttctagggttttgggggtaaaggctttagctcactgtgcaagcaaacagtgcgtagccgaggagtctcactgccgtatgtcagtggagcaaggacacacatgttgtgtgttttactgatccctctgcacaaacatctcacatagagagagagagagagagagagagagatgtacatgttcagagatgcatcccccatctgtcacgcaaggccagaacaatattcttgtcatctttcactccccctggagaaacgaagtggctacctgttgtcctagaatctctcttctcttggttatgtgaggtggtgttgttgctgtggtcttccagattgttgtgtggatacacagtgcctgcctgtgttcttgtggtgttcttcttttagtctttgctaaattttaaaatgtagacatcaggtggttccagataggccttctctaatgacctgtcacgagagcatagtaagtagcagtaccagcacacagttgacactctcactgtgcagggtttttcgctcatcaggagctgtatccatgcatgcacaggtgctgctactactatgccacacaatcacttcattattggagcatgtagtagggtagaagctgccatctcatgtgtgttgcatgcacagaagcaggatatcaatagtgaattcagatgcatatgtgtagaaattgattaaaaccctgaacaagtttgttgaaataggaaacctgaacaggtagtgaggtcagtcttgtgtagaaatccaatggtcagatagatgtattcctacacactctactatatacgtagtaggtagacagatgagtaaatgggatagtatactatacagtaggtcagtcttgtgtagaaatccaatgtacagcagtatactccatgacttggtattctgtgttttctgaccagtgaagtcgcatggacagaacggtcagagctagcctcgagaaagatacagttaagcaagagcatagcctattatttgatgtgagatctccttgcaatattttgggtgatctccttggctatactagtagtaccagtattatatactccactatagagtactactcgtgtattttttgccagtcttcttctagttctcttcattctctctcatagatgtaatggcggtcaagaaacattggatgctttccaaggctagtccgagttcaaatgcgtctgtatttttcagctgtcaactcatttcttctcaggttcaattgttctttgtcctactacttggacctaggtagacgcacatctactctatatgcgttctcttttccaaaaaatatgactggcttacctgattcacgaggcaacctgaatatcacccggtcaaggttgcaggtgatcattcctaattgtgtttaggaccatagcttgattttaatcacaaaacaacactgcatttttctgactgatgttgcacctgatgtactccaagattcttcgttgcatgcattctttcaaggccatgcaaaagcaggggacacagatatcacgagtttccgtttgtctcgaggcaacaccaaaagagatactgaaactttgcttgctaaaaagcaaacaaaagaaaacaatgggatggaaaagagctgactgattttgcaatggaacgtacgtcactagaaaagacaatgcatgcaactggaggacagtagtatgactcgacaaattgagttaacaaaaattttttggatgataattgttcccctcatgtctttttgtgattgccaaatcgatagtgttggttcttccatttctaaattccggagtttctgtgtctggcattcctttttcttgatgtgtcagacatcttctgtacatttagtctgaggttctgctgggtaatgaaggtcctcttcgtttgcttctgctcttaattttattagctgtagtttttggttaatgcaagttaaaacaaaaatatctctttaattaacttagttcttcaaaattgagtcttaaaaatcctacaaatattgcaacttgcatgatgcattccatcaatattttgtttgcatgcgagtgcagctcctagaacactctcttgcttttctttttccttttttaatgtaaagctgctatattcaataatatatattttcatctatttagtgaacacaaaggaactatttaggcagtgattcggctacctctcccagttgattgttctgttttttccttggcattattttcgcatagatactaatgtttcttatttatttatgaaaaattaagttgcgcattatttttatacatgattcatgttatattgaccaaataaagtcttatagaagtgcaatattttgtgctacacaatacaagatgtgctgtggtagaatttacccatgactcatattgtcatttttgaaaattttcccgtgggttacatgaaataattgtcttgctcctgtgaatatttggatgtgtctgacctttttatagatgttttacagggagtccgaccaagaatgcctgagtcaaaattagcttctgtattatctttccctgtttttcttcattttgcagagtaaaccaatgttctctgctccttacataagcagtaattcttcacaagttgggaacaaatgtggggaaaatcgtctaacccttcatttattgatccttgtttcccccctaatgtggccttatgttttagaacttcatgcaagtaaccgatatgcatgattacatgaatatgctagcaccatcatccatgagttgcaattgatcataactaaatatatattaaatatttaaaacatgaattttttaaataaatgataaataattgtgctgaaatgttgaacatacacaagtatgctactagtatattgttttaaagcaaatcgttacaaaaaaaagacacacatacctccaaatt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| + | * Department of Biology, Aichi University of Education, Kariya 448, Japan |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057674.1 RefSeq:Os03g0727000]|
| + | |
| − | }}
| + | ==References== |
| − | [[Category:Genes]] | + | <references> |
| − | [[Category:Japonica mRNA]]
| + | * <ref name="ref1"> |
| − | [[Category:Oryza Sativa Japonica Group]] | + | Sato Y, Hong SK, Tagiri A, Kitano H, Yamamoto N, Nagato Y, Matsuoka M. A rice |
| − | [[Category:Japonica Genes]] | + | homeobox gene, OSH1, is expressed before organ differentiation in a specific |
| − | [[Category:Japonica Chromosome 3]]
| + | region during early embryogenesis. Proc Natl Acad Sci U S A. 1996 Jul |
| − | [[Category:Chromosome 3]]
| + | 23;93(15):8117-22. PubMed PMID: 8755613; PubMed Central PMCID: PMC38885. |
| | + | </ref> |
| | + | </references> |
| | + | |
| | + | ==Structured Information== |
| | + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 3]] |
