Difference between revisions of "Os04g0610400"
Songyuanfang (talk | contribs) (→Function) |
(→Annotated Information) |
||
| (5 intermediate revisions by 3 users not shown) | |||
| Line 1: | Line 1: | ||
| − | + | The rice '''''Os04g0610400''''' was reported as '''''OsAP2-39''''' in 2010 and 2011, respectively <ref name="ref1" /><ref name="ref2" /> by researchers from Canada and China. | |
==Annotated Information== | ==Annotated Information== | ||
| + | [[File:312-Os04g0610400.png|right|thumb|327px|'''Figure 4.''' '' The size of roots system is significantly reduced by | ||
| + | the OsAP2-39 overexpression in rice..<ref name="ref1" />.'']] | ||
| + | |||
| + | ===Gene Symbol=== | ||
| + | *'''''Os04g0610400''''' '''''<=>''''' '''''OsAP2-39, OsERF#077, OsERF077, OsERF77, AP2/EREBP#149, AP2/EREBP149''''' | ||
| + | |||
===Function=== | ===Function=== | ||
| − | + | * The phytohormone ethylene is a key signaling molecule that regulates a variety of developmental processes and stress responses in plants. Transcriptional modulation is a pivotal process controlling ethylene synthesis, which further triggers the expression of stress-related genes and plant adaptation to stresses. | |
| − | + | * The APETALA-2-Like Transcription Factor OsAP2-39 Controls Key Interactions between Abscisic Acid and Gibberellin in Rice. | |
| + | * ERF protein '''''OsAP2-39''''' controls the ABA/gibberellins balance in rice, which in turn regulates plant growth and seed production. | ||
| + | * '''''OsAP2-39''''' links the ABA production and GA deactivation processes which results in ABA/GA balance and homeostasis<ref name="ref1" /><ref name="ref2" />. | ||
| + | |||
| + | ===Phenotypic analysis=== | ||
| + | * Controlling the expression level of '''''OsAP2-39''''' which includes an APETALA 2 (AP2) domain leads to phenotypic changes in rice. | ||
| + | * Overexpression of '''''OsAP2-39''''' leads to a reduction in yield by decreasing the biomass and the number of seeds in the transgenic rice lines. | ||
| + | * Global transcriptome analysis of the '''''OsAP2-39''''' overexpression transgenic rice revealed the upregulation of a key Abscisic Acid (ABA) biosynthetic gene OsNCED-I which codes for 9-cis-epoxycarotenoid dioxygenase and leads to an increase in the endogenous ABA level. | ||
===Expression=== | ===Expression=== | ||
| − | + | * overexpression of '''''OsERF3/OsAP2-39''''' suppressed ethylene synthesis. | |
| − | + | * In vivo and in vitro analysis showed that the expression of both OsNCED-1 and EUI are directly controlled by OsAP2-39. | |
| − | |||
| − | |||
You can also add sub-section(s) at will. | You can also add sub-section(s) at will. | ||
==Labs working on this gene== | ==Labs working on this gene== | ||
| − | + | * Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China, | |
| + | * National Key Facility of Crop Gene Resources and Genetic Improvement, Beijing, China | ||
| + | * National Center for Plant Gene Research (Beijing), Beijing, China | ||
==References== | ==References== | ||
| − | + | <references> | |
| + | * <ref name="ref1"> | ||
| + | Yaish MW, El-kereamy A, Zhu T, Beatty PH, Good AG, Bi YM, Rothstein SJ. The APETALA-2-like transcription factor OsAP2-39 controls key interactions between abscisic acid and gibberellin in rice. PLoS Genet. 2010 Sep 9;6(9):e1001098.</ref> | ||
| + | |||
| + | * <ref name="ref2"> | ||
| + | Wan L, Zhang J, Zhang H, Zhang Z, Quan R, Zhou S, Huang R. Transcriptional | ||
| + | activation of OsDERF1 in OsERF3 and OsAP2-39 negatively modulates ethylene | ||
| + | synthesis and drought tolerance in rice. PLoS One. 2011;6(9):e25216. doi: | ||
| + | 10.1371/journal.pone.0025216. PubMed PMID: 21966459; PubMed Central PMCID: | ||
| + | PMC3180291. | ||
| + | |||
| + | </ref> | ||
| + | </references> | ||
==Structured Information== | ==Structured Information== | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
[[Category:Genes]] | [[Category:Genes]] | ||
[[Category:Japonica mRNA]] | [[Category:Japonica mRNA]] | ||
Latest revision as of 04:12, 8 March 2017
The rice Os04g0610400 was reported as OsAP2-39 in 2010 and 2011, respectively [1][2] by researchers from Canada and China.
Contents
Annotated Information
Figure 4. The size of roots system is significantly reduced by the OsAP2-39 overexpression in rice..[1].
Gene Symbol
- Os04g0610400 <=> OsAP2-39, OsERF#077, OsERF077, OsERF77, AP2/EREBP#149, AP2/EREBP149
Function
- The phytohormone ethylene is a key signaling molecule that regulates a variety of developmental processes and stress responses in plants. Transcriptional modulation is a pivotal process controlling ethylene synthesis, which further triggers the expression of stress-related genes and plant adaptation to stresses.
- The APETALA-2-Like Transcription Factor OsAP2-39 Controls Key Interactions between Abscisic Acid and Gibberellin in Rice.
- ERF protein OsAP2-39 controls the ABA/gibberellins balance in rice, which in turn regulates plant growth and seed production.
- OsAP2-39 links the ABA production and GA deactivation processes which results in ABA/GA balance and homeostasis[1][2].
Phenotypic analysis
- Controlling the expression level of OsAP2-39 which includes an APETALA 2 (AP2) domain leads to phenotypic changes in rice.
- Overexpression of OsAP2-39 leads to a reduction in yield by decreasing the biomass and the number of seeds in the transgenic rice lines.
- Global transcriptome analysis of the OsAP2-39 overexpression transgenic rice revealed the upregulation of a key Abscisic Acid (ABA) biosynthetic gene OsNCED-I which codes for 9-cis-epoxycarotenoid dioxygenase and leads to an increase in the endogenous ABA level.
Expression
- overexpression of OsERF3/OsAP2-39 suppressed ethylene synthesis.
- In vivo and in vitro analysis showed that the expression of both OsNCED-1 and EUI are directly controlled by OsAP2-39.
You can also add sub-section(s) at will.
Labs working on this gene
- Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China,
- National Key Facility of Crop Gene Resources and Genetic Improvement, Beijing, China
- National Center for Plant Gene Research (Beijing), Beijing, China
References
- ↑ 1.0 1.1 1.2 Yaish MW, El-kereamy A, Zhu T, Beatty PH, Good AG, Bi YM, Rothstein SJ. The APETALA-2-like transcription factor OsAP2-39 controls key interactions between abscisic acid and gibberellin in rice. PLoS Genet. 2010 Sep 9;6(9):e1001098.
- ↑ 2.0 2.1 Wan L, Zhang J, Zhang H, Zhang Z, Quan R, Zhou S, Huang R. Transcriptional activation of OsDERF1 in OsERF3 and OsAP2-39 negatively modulates ethylene synthesis and drought tolerance in rice. PLoS One. 2011;6(9):e25216. doi: 10.1371/journal.pone.0025216. PubMed PMID: 21966459; PubMed Central PMCID: PMC3180291.
