Difference between revisions of "Os01g0884300"
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| − | + | The rice '''''Os01g0884300''''' was reported as '''''SNAC2''''' in 2008 <ref name="ref1" /> by researchers from China. | |
==Annotated Information== | ==Annotated Information== | ||
| + | [[File:317-Os01g0884300.png|right|thumb|427px|'''Figure 1.''' ''Expression pattern of SNAC2 in japonica rice IRAT109.<ref name="ref1" />.'']] | ||
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| + | ===Gene Symbol=== | ||
| + | *'''''Os01g0884300''''' '''''<=>''''' '''''OsNAC6, ONAC048, NAC48, SNAC2, SNAC2/OsNAC6, OsNAC6/ONAC048, OsSNAC2''''' | ||
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===Function=== | ===Function=== | ||
| − | + | * NAC (NAM, ATAF, and CUC) is a plant specific transcription factor family with diverse roles in development and stress regulation. | |
| + | * '''''SNAC2''''' is a novel stress responsive NAC transcription factor that possesses potential utility in improving stress tolerance of rice. | ||
| + | |||
| + | ===Phenotypic analysis=== | ||
| + | * The '''''SNAC2''''' gene was over-expressed in japonica rice Zhonghua 11 to test the effect on improving stress tolerance. More than 50% of the transgenic plants remained vigorous when all WT plants died after severe cold stress (4–8°C for 5 days). | ||
| + | * The transgenic plants had higher cell membrane stability than wild type during the cold stress. The transgenic rice had significantly higher germination and growth rate than WT under high salinity conditions. | ||
| + | * Over-expression of '''''SNAC2''''' can also improve the tolerance to PEG treatment. In addition, the '''''SNAC2'''''-overexpressing plants showed significantly increased sensitivity to ABA. DNA chip profiling analysis of transgenic plants revealed many up-regulated genes related to stress response and adapta- tion such as peroxidase, ornithine aminotransferase, heavy metal-associated protein, sodium/hydrogen exchanger, heat shock protein, GDSL-like lipase, and phenylalanine ammonia lyase. | ||
| + | * Interestingly, none of the up-regulated genes in the '''''SNAC2'''''-overexpressing plants matched the genes up-regulated in the transgenic plants over-expressing other stress responsive NAC genes reported previously. | ||
===Expression=== | ===Expression=== | ||
| − | + | * '''''SNAC2''''' gene was induced by drought, salinity, cold, wounding, and abscisic acid (ABA) treatment. | |
| − | === | + | ===Subcellular localization=== |
| − | + | * '''''SNAC2''''' was proven to have transactivation and DNA-binding activities in yeast and the SNAC2-GFP fusion protein was localized in the rice nuclei. | |
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==Labs working on this gene== | ==Labs working on this gene== | ||
| − | + | * National Center of Plant Gene Research (Wuhan), National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China | |
==References== | ==References== | ||
| − | + | <references> | |
| + | * <ref name="ref1"> | ||
| + | Hu H, You J, Fang Y, Zhu X, Qi Z, Xiong L. Characterization of transcription | ||
| + | factor gene SNAC2 conferring cold and salt tolerance in rice. Plant Mol Biol. | ||
| + | 2008 May;67(1-2):169-81. doi: 10.1007/s11103-008-9309-5. Erratum in: Plant Mol | ||
| + | Biol. 2010 Mar;72(4-5):567-8. PubMed PMID: 18273684. | ||
| + | </ref> | ||
| + | </references> | ||
==Structured Information== | ==Structured Information== | ||
| − | + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]] | |
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| − | [[Category:Genes]] | ||
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| − | [[Category:Oryza Sativa Japonica Group]] | ||
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Latest revision as of 05:22, 8 March 2017
The rice Os01g0884300 was reported as SNAC2 in 2008 [1] by researchers from China.
Contents
Annotated Information
Figure 1. Expression pattern of SNAC2 in japonica rice IRAT109.[1].
Gene Symbol
- Os01g0884300 <=> OsNAC6, ONAC048, NAC48, SNAC2, SNAC2/OsNAC6, OsNAC6/ONAC048, OsSNAC2
Function
- NAC (NAM, ATAF, and CUC) is a plant specific transcription factor family with diverse roles in development and stress regulation.
- SNAC2 is a novel stress responsive NAC transcription factor that possesses potential utility in improving stress tolerance of rice.
Phenotypic analysis
- The SNAC2 gene was over-expressed in japonica rice Zhonghua 11 to test the effect on improving stress tolerance. More than 50% of the transgenic plants remained vigorous when all WT plants died after severe cold stress (4–8°C for 5 days).
- The transgenic plants had higher cell membrane stability than wild type during the cold stress. The transgenic rice had significantly higher germination and growth rate than WT under high salinity conditions.
- Over-expression of SNAC2 can also improve the tolerance to PEG treatment. In addition, the SNAC2-overexpressing plants showed significantly increased sensitivity to ABA. DNA chip profiling analysis of transgenic plants revealed many up-regulated genes related to stress response and adapta- tion such as peroxidase, ornithine aminotransferase, heavy metal-associated protein, sodium/hydrogen exchanger, heat shock protein, GDSL-like lipase, and phenylalanine ammonia lyase.
- Interestingly, none of the up-regulated genes in the SNAC2-overexpressing plants matched the genes up-regulated in the transgenic plants over-expressing other stress responsive NAC genes reported previously.
Expression
- SNAC2 gene was induced by drought, salinity, cold, wounding, and abscisic acid (ABA) treatment.
Subcellular localization
- SNAC2 was proven to have transactivation and DNA-binding activities in yeast and the SNAC2-GFP fusion protein was localized in the rice nuclei.
Labs working on this gene
- National Center of Plant Gene Research (Wuhan), National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China
