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| − | {{JaponicaGene|
| + | The rice '''Os08g0159500''' was reported as ''' OsLSD1''' in 2005 <ref name="ref1" /> by researchers from the China. |
| − | GeneName = Os08g0159500|
| + | <br> |
| − | Description = Similar to Zinc-finger protein Lsd1|
| + | ==Annotated Information== |
| − | Version = NM_001067577.1 GI:115474890 GeneID:4344713|
| + | ===Gene Symbol=== |
| − | Length = 2961 bp|
| + | *'''Os08g0159500 <=> OsLSD1''' |
| − | Definition = Oryza sativa Japonica Group Os08g0159500, complete gene.|
| + | ===Function=== |
| − | Source = Oryza sativa Japonica Group
| + | *'''''OsLSD1''''' is a rice zinc finger protein, which can regulates programmed cell death and callus differentiation |
| | + | ===Expression=== |
| | + | *Overexpression of '''OsRAN2''' in rice resulted in enhanced sensitivity to salinity, osmotic stress, and ABA. Seedlings of transgenic Arabidopsis thaliana plants overexpressing '''OsRAN2''' were overly sensitive to salinity stress and exogenous ABA treatment. |
| | + | *'''OsRAN2'''overexpression in tobacco epidermal leaf cells disturbed the nuclear import of a maize (Zea mays L.) leaf colour transcription factor (Lc). In addition, gene-silenced rice plants generated via RNA interference (RNAi) displayed pleiotropic developmental abnormalities and were male sterile. |
| | | | |
| − | ORGANISM Oryza sativa Japonica Group
| + | ==Labs working on this gene== |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| + | * National Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100080, P R. China. |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| + | ==References== |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| + | <references> |
| − | |
| + | <ref name="ref1"> |
| − | Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|
| + | Wang, Lijuan, Zhongyou Pei, Yingchuan Tian, and Chaozu He. "OsLSD1, a rice zinc finger protein, regulates programmed cell death and callus differentiation." Molecular Plant-Microbe Interactions 18, no. 5 (2005): 375-384. |
| − | AP = Chromosome 8:3459801..3462761|
| + | </ref> |
| − | CDS = 3460071..3460106,3460273..3460382,3460843..3460956,3461277..3461390,3461821..3462001<br>|
| + | |
| − | GCID = <gbrowseImage1>
| + | </references> |
| − | name=NC_008401:3459801..3462761
| + | <br> |
| − | source=RiceChromosome08
| + | |
| − | preset=GeneLocation
| + | ==Structured Information== |
| − | </gbrowseImage1>| | + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 8]] |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008401:3459801..3462761
| |
| − | source=RiceChromosome08
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>| | |
| − | CDNA = <cdnaseq>atgcatctttctgcagggtttctttcatgtagggaaaggaaaggtgatttcagttgcctgactgctgccagaatctgcgaagcatctacaagcgacgccgtcgttcaggcagccggcacggcaatgccggttccccttgctccatacccaaccccgcctgtgccatttacacctcccaatggggctcaaagccagctcgtgtgctctgggtgccgtaatctgctcatgtatccagccggagcaacgtcggtttgctgcgcagtttgcagtaccgtgactgctgtgcctgctcctggaaccgagatggcgcagttagtttgcggaggatgccacactctcctgatgtatatacgcggtgcgacgagtgtgcaatgttcttgctgtcacactgtcaacctggctatggaagcaaatcaagttgcgcatgtaaactgcgggaactgccgtatgctgctcatgtaccagtatggcgcaaggtctgtcaaatgcgcagtctgcaattttgtgacatcagttggggcctcacctggtacagaccagaagcccagcagctga</cdnaseq>|
| |
| − | AA = <aaseq>MHLSAGFLSCRERKGDFSCLTAARICEASTSDAVVQAAGTAMPV PLAPYPTPPVPFTPPNGAQSQLVCSGCRNLLMYPAGATSVCCAVCSTVTAVPAPGTEM AQLVCGGCHTLLMYIRGATSVQCSCCHTVNLAMEANQVAHVNCGNCRMLLMYQYGARS VKCAVCNFVTSVGASPGTDQKPSS</aaseq>|
| |
| − | DNA = <dnaseqindica>2656..2691#2380..2489#1806..1919#1372..1485#761..941#gtaagagagaggagatagagagagctgtactaactgatgaactgctctcatgcaagccagattaccataaagattgggtcataagcactgttgttaggtgctgcttctgctcctaattatttttttctctctggatgtttttttgttgaatggttgataattcctccatctttgagtttctatcttctctttggcttgctctggtcttgttcatgattctttacctgtttcttgattgctgatggcaagcatttccttgttgtttttggactcaagatttagctggtaattttatatccacctaccttatcatgtacttgttcttgctcatcttttatcaggttatcaatgggaaatagttttcatggacgttattggccgtgaatcccaagtggtgtggctaatctctccaaactaataaaagttcatgtgagttttgttggtattttagcacaaaaaaagtactcaaatagctctttgcctggatgccatacccaccaatgaattttcaattatcgggtggttcttatttttttgggtatatgtaaacagaatctgaacacaagatttgatgagagattcaaccaagaagctgaaattttttgcacctgatgtgcattgctgaaccaattttctgttgcataaagagtcctgaaacttcatgttgcaaactgaagcgtgatgttctaacatttttccattggagctttcactggtttcttcagaactgaaatctttcttgctttctcatcagcttctcatgcatctttctgcagggtttctttcatgtagggaaaggaaaggtgatttcagttgcctgactgctgccagaatctgcgaagcatctacaagcgacgccgtcgttcaggcagccggcacggcaatgccggttccccttgctccatacccaaccccgcctgtgccatttacacctcccaatggtatggattccaacttggcactgcaagaacacagctacttttttagttttttttcccctgatgttggctggtcacctgaaaatgttgggctgactgattaatttaatcttttctcaagatgtgcatattaagtgtttgccctggtgcatgcttttggattagaaatcttgtgaactaaactttcttagacagtttttgttgaatcaaatgttactgttcctggttcagaggtagcagtttattctgctcatagaaataagttcagagagaactcccacttgataaaatggaagttctttactgctgagttttgttgtctgaaatgaaaacattgcatggaagatgcttttgttgtctgaaaatgaaaatgttagctgctgaaatgtgagattcagtcagtctctgaagagccatgattgtgcaatttcaggggctcaaagccagctcgtgtgctctgggtgccgtaatctgctcatgtatccagccggagcaacgtcggtttgctgcgcagtttgcagtaccgtgactgctgtgcctgctcctggtatgcacatgattcactcaggttttacatctcaaggttttgtttgtaagtaatgtggcatctgaaaattgagtttctttgcatctaaattttatagtagtttagaagtttatattgtaccctctgttttatttacaaaagtgagtagtttttggtttttagagcagaaatatagctgcaatgttcacaaaaatgtaaagagagattaaaggggatagcctgttttcccttgaaatcgatgcatgagttttgcatttgctgaaattttgttctgaaatgcagttttgccaatgattttcctacctggaatttctgtgcaggaaccgagatggcgcagttagtttgcggaggatgccacactctcctgatgtatatacgcggtgcgacgagtgtgcaatgttcttgctgtcacactgtcaacctggctatggaaggtactaccaaaatttatcatcctcctcctctgttgcaattggtatattctgtggctttgattccagtatgcaaaatcctcctcctgaacagaatattttcctgtggctgaaagcaacagcaatcagtcggtagcaataaacatcgtcgagttggcttgtattccagtcatattcatgagagttggctatggttcagaaaacaaaaaagtttgacaaggatacactagatttaccagagtatgatgaaatatctcctacaattacaagatgtgctacagtagtatcctatacttactgaaggtctcacaaggacacctaatttagcatcaagttctgaagttccatataatttgttcagagttcagagttttctttaaggcagacttctgaaagatgagtgtttgttcatataatcttaaacacactgaataacaaatgattcccatgttcttgatggcagcaaatcaagttgcgcatgtaaactgcgggaactgccgtatgctgctcatgtaccagtatggcgcaaggtctgtcaaatgcgcagtctgcaattttgtgacatcagttggggtaagtgttcatcaacaggacacttcaatttcatatttagttcctttatctgaaaacattcaattttacagtagcatcatctaatggctaatattgcactgcaacctgatttttttcatgatgtgaccttagttgaagagtgtgttttttttctgaatcttttcaggcctcacctggtacagaccagaagcccagcagctgaactgctgaagtgccataaatattcagaaaagagcttctcaaaccgatgctttgagtgcacatgtatagagttcttccctgaagcattttttttcttccttttttatctccctttccccccaatttccaccttccttccttggatatggagagagcctgcggaataaatgagagttttgctaaatacctagtgctcaaaattcgtcgaatcgtctgtatgaccgaacaagattgacatattatatacataaacctatgataatatttatgc</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001067577.1 RefSeq:Os08g0159500]|
| |
| − | }}
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| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 8]]
| |
| − | [[Category:Chromosome 8]]
| |
