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| − | {{JaponicaGene|
| + | The rice '''''Os03g0771500''''' was reported as '''''OsH43''''' in 2000 <ref name="ref1" /> by researchers from Japan. |
| − | GeneName = Os03g0771500|
| |
| − | Description = Knotted1-type homeobox protein OSH43|
| |
| − | Version = NM_001057942.1 GI:115455612 GeneID:4334261|
| |
| − | Length = 5645 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os03g0771500, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| | | | |
| − | ORGANISM Oryza sativa Japonica Group
| + | ==Annotated Information== |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| + | ===Gene Symbol=== |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| + | *'''''Os03g0771500''''' '''''<=>''''' '''''OsH43''''','''''H43''''' |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| + | |
| − | |
| + | ===Function=== |
| − | Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
| + | * Homeobox genes encode a large family of homeodomain proteins that play a key role in the pattern formation of embryos. |
| − | AP = Chromosome 3:32815278..32820922|
| + | * By analogy, homeobox genes in plants are thought to mediate important processes in their embryogenesis. |
| − | CDS = 32815574..32815888,32816022..32816159,32816286..32816394,32820136..32820347,32820450..32820701<br>|
| + | |
| − | GCID = <gbrowseImage1>
| + | ===Phenotypic analysis=== |
| − | name=NC_008396:32815278..32820922
| + | * Over-expression of '''''OSH15''''' and '''''OSH71''''' Induces Ectopic Meristems on Leaf Sheaths. |
| − | source=RiceChromosome03
| + | * Over-expression of '''''OSH6 ''''' and '''''OSH43''''' Induces Ligule Displacement in Transgenic Plants. |
| − | preset=GeneLocation
| + | |
| − | </gbrowseImage1>|
| + | ==Knowledge Extension== |
| − | GSID = <gbrowseImage2>
| + | * Many homeobox genes encode transcription factors with regulatory roles in animal and plant development. |
| − | name=NC_008396:32815278..32820922
| + | * Homeobox genes are found in almost all eukaryotes, and have diversified into 11 gene classes and over 100 gene families in animal evolution, and 10 to 14 gene classes in plants. |
| − | source=RiceChromosome03
| + | * The largest group in animals is the ANTP class which includes the well-known Hox genes, plus other genes implicated in development including ParaHox (Cdx, Xlox, Gsx), Evx, Dlx, En, NK4, NK3, Msx, and Nanog. <ref name="ref2" />. |
| − | preset=GeneLocation
| + | |
| − | </gbrowseImage2>| | + | ==Labs working on this gene== |
| − | CDNA = <cdnaseq>atggagagcttcgccagtctcgcaggaggtggcagcagcagcaccacagctcggttgccggagctgatctcgccggagaacccggaccacatctcgccgcccccgttgctgtaccagctgctcgccggcccggagtcgtcggcgcggcagcatgggcatgatgggcatcaccacggcggcggtggcggcgaagcagcagcagcagctgtgcagggacaggtctcgccggcaggcgcggaggcggcggtcaaggccgagatcatgtcgcatccacagtactcggctctcctagccgcctacttaggctgcaaaaaggtcggggcgccgccggatgtactgaccaagctcacggctgtgccggcggcgcagcagctggacgaagccgacggccaccctcgtcgccggcacgagccacagcgtgatgacgacccggatcagctcgatcagttcatggacgcgtactgcagcatgctgacgaggtacagggaggagctggagcggccgatcctggaagccgcggagttcttcagcagggtggagacgcagctcgattcgctcgctgagagtaattgtgaaggcacgggatcatcagaggaagagcaagaccctagtgacaagcagctgaagcaccagcttctgaggaagtacggtggctcgttgggcgatctccggcaggtgttctccaagaggaccaagaaagggaagcttcccaaggaggccaggcagaagcttctgcactggtgggagctgcactacaagtggccctatccctccgagatggagaagatgacgctggcgcagacgacggggctggaccagaagcagatcaacaactggttcatcaaccagaggaagcggcactggaagccgacgccggtggcaggcacggccttcccgacgatggaagctgccggaggcggcttccgacactccggccacggcggcggccttgcggcggcggcggcgctgccgctgtacatgggcaggccgttcgttgtggacggcatgtaccggctcgggtcttga</cdnaseq>|
| + | * BioScience Center, Nagoya University, Chikusa, Nagoya 464-8601, Japan |
| − | AA = <aaseq>MESFASLAGGGSSSTTARLPELISPENPDHISPPPLLYQLLAGP ESSARQHGHDGHHHGGGGGEAAAAAVQGQVSPAGAEAAVKAEIMSHPQYSALLAAYLG CKKVGAPPDVLTKLTAVPAAQQLDEADGHPRRRHEPQRDDDPDQLDQFMDAYCSMLTR YREELERPILEAAEFFSRVETQLDSLAESNCEGTGSSEEEQDPSDKQLKHQLLRKYGG SLGDLRQVFSKRTKKGKLPKEARQKLLHWWELHYKWPYPSEMEKMTLAQTTGLDQKQI NNWFINQRKRHWKPTPVAGTAFPTMEAAGGGFRHSGHGGGLAAAAALPLYMGRPFVVD GMYRLGS</aaseq>|
| + | |
| − | DNA = <dnaseqindica>297..611#745..882#1009..1117#4859..5070#5173..5424#cactgttgctgctgctgctgctgcttgcaaacactgaatagcctaacctcttcattaatttctcgctctgattttgacgttagaacaaagctaagatgggccatacgtatactaggaggagtaccatcatattcatcttctttctagcttcctctcctcttcacattccctgcatccatccatctcaaccaccaccacctcatttcaggagatcatctcctccttttctttgctagggtttgtttgccataactactatctatcgcctcttcttcacctcacctgtcctgtcggccatggagagcttcgccagtctcgcaggaggtggcagcagcagcaccacagctcggttgccggagctgatctcgccggagaacccggaccacatctcgccgcccccgttgctgtaccagctgctcgccggcccggagtcgtcggcgcggcagcatgggcatgatgggcatcaccacggcggcggtggcggcgaagcagcagcagcagctgtgcagggacaggtctcgccggcaggcgcggaggcggcggtcaaggccgagatcatgtcgcatccacagtactcggctctcctagccgcctacttaggctgcaaaaaggtgtagtagctaagctagcagatgcatatatttaaacccatgcagatacagacgacaacacgccatgtgctgaccaagctcacggccgtgccggatgtactgaccaagttgattttgttggtttttttatcaggtcggggcgccgccggatgtactgaccaagctcacggctgtgccggcggcgcagcagctggacgaagccgacggccaccctcgtcgccggcacgagccacagcgtgatgacgacccggatcagctcgatcagttcatggtatcaacatatatagatcatcaactcctttgctcgcatgcgtgcatatatatagacagacacacacacatatatatccactgttcttctgatcgatcgacatgggatctgatcttgtcatcacaggacgcgtactgcagcatgctgacgaggtacagggaggagctggagcggccgatcctggaagccgcggagttcttcagcagggtggagacgcagctcgattcgctcgctggtgagtattttatacgcctcttctctacaaagatttgcagcttgccatattgggaaatgccgaaatggtatctcactttatggaattggagttagttttttttttgtcacctctttggactcatgtggctgttgcagcagtatttcttaaggctgctaatctcaggctttaatatgtttattagggtgggggataagggttgcatgcattagatcagtttcgtaataattggagcttaattaagtatacatgaccagtatgataagcatcatgaggtcacacggtgaggctgcgagctgagctccagggtttccaaattgccatatatgcatggctctcctactttccagtctccacttcctcctgtgcaatacaacgatggtgtcctccctctgtcgtacaatcttaatgaatcatacaaaggaataattaatactggagcacatgcagttctttgaacttgtaccttgtactgacgttattttttttcctctgattttcttttatttttagaattaagacccaaccttgctgacattattagcttctaattaaagagttcagtgcatgcatcacaagtgatgaactgacaggagaaagctctcagcacgttctgtccccaatatctctgcaggtccttgtctaacctacatttttgctctcttgtcatgtcttccgctggtagtcacagagaaatggctagacgatctttgttttcaacttagacgatttatgttaagattaagggccaagaggtaaattaaacgaaccatcaaagtttgcagaacatagtggccaaattgaggtgtaagtaacatctagctggttgaaaacatgagtggcggtggatgacagaatgagtggccggtgggcctattgtcattgtgcctccgtgagtgtaattggtttaccgacctcaaatcctggatcgagtcttggctgtcggacatgaatgggcactgttagtaccctgtgcactttgtctcatggcctggatatatagttactggagtggggtaaggatccagctatatattagacaattgataagtgtgtatgaccatctagttgtgtcctttcaagtgcagttgtttccgaacattattgagcactttccgtagccatacgaatagatttccagatcagaactctttcttatatatacagacatcaatcgagtgccaaataattgaaagaatgaaagcagcatagtgaccagcatgcatatcatattgtgttttgttgaaacatagttcaataattttgtctatatgaactagtgtagttttttacactggtaattgcatatatacaaggtggtgtttcataagacgactaatatggcaaaattatgaaattcactatccgtacaaatcctggataatatataggagtacatatatggaagaattatctggtttcttatatatttagtctgccaaaatgtcattcagctattcccctaccgatgaggcatttttttttgtgtctacacatatattcctgtctacagatggtctcttttggaattgatttttgtttctaatttgttggacagatggtctcttttggaattgattttttttctaatttgttggatatttattggactggtgcaacaattcatcccctcacacatgatttgatctattccatatactcagatgaattgttggaatcctactatttcaccagtatggatcatgttcagatattagctattgacttttagatatgacgtttgaaatataaattattttttgtgacttgtttattattaaaggtacatcaaacataacttataattttacatatttgcactatttttttttgtaaggtgaatggacaaacgtcatgttcaaaagtcagcaatgtcatatatttaaaaaaggagggaggattgcattaggagttcataagagtgataaacacggcttgttaataagtgaatgattatctaacttaacatatatatcatccacaacaatgaaaatacagtctatgcacacattactttaaccagtgtcttgtactagcatcaatactaactagactttgcactcttttgatgtcatttcgtctcaatgttgtcatttcagaaatatccatttaactgttcataagtaacacttttcattctgttaattactttttgaatcatattctggttgcatgctgctctactgtctggaaatattccaatgtcaacagaatgtgtatgtgcacacatgcagcataaatagctcccagaaagtttcaaataaatttttatattggatggaatttgaactgcatactataaatattatcctatgaattgtaggagttgtgtaatatatttgttatttatattttttttaatcttctgaaatcaagggtatgaataatttttttagtggaactagtgtagtctttgtaagtatttggccttatttcattgttaaaatcaatagttttgtctatatgaattagtgtagttttttacactagtagttgcatatatacaaggtggtgtttcaaaagacgactaatatggcaaaatttatgagattcactatccgtacaaatcctggatctatatattacaatcgctttgagatgaatgcaaattaggatgggcacaattttttcatagcatggtggaatggtttctcttgtcaccatcgttttgaactcatctttattatgtgcccgctaattactccctcctttctaaattgattatcatgtaatagaaatcaaaatttcttaaattgatcatcatataactgcatggagacggatttcatcggaatacaattaatacaacatgggagaatgcgtgcatgctagggtggagtaattggcatggagttttaatcgatgtatgcattgtgggagaatgtgtgcattgtgtcttgattgatgtgatttaaattattttttggtcttggtgcgtaaatttatatgatgatcaatttgagaaggagacagtatattttaaaaccgttctgtctaagtgttcacacaagatcactgatttttttttttgccttcgaataaacagaacacaagcaggccttgtaatatttagtatatattcttgtcatagcttttccctacgaatcaaaatgaatatccttgtctcaaattgaacggtatggcggctgtttgactagtctagttttctgcttggaatttggaaataccgtggcctgtttggtggagctttagattctgataatcagctgtttggtagcaagcttctgaaaatctggaaatgctctgaaacccagcttctccagcttctggcttcttagttcaattttcagaatctgtaactacagattctcagaagctgtggactgtttgggacagcttctagcagaagtagcttttgggaaaagttgcagctggaagaagctcctccaaacagggcctgtctagctgagcaaggacaattattgggtgcacagagtgtacaacatgttcaggccttcagggttgcactgttgcttacttcgatacactcctacctagtaaacacaaagaattaattgactgactggtggcctggtggggctgaccgattgagtaatacacagtactaccattatactctatgcataatctattcgatctcccacacctcccttcatatgaggtttacctgctgtgacgcacgcagtcatgtaatttttaattattttgatagaacatcatgttgaacaattaacctttttgagctgctgtttttaacagagagtaattgtgaaggcacgggatcatcagaggaagagcaagaccctagtgacaagcagctgaagcaccagcttctgaggaagtacggtggctcgttgggcgatctccggcaggtgttctccaagaggaccaagaaagggaagcttcccaaggaggccaggcagaagcttctgcactggtgggagctgcactacaagtggccctatccctccgtacgcacgcatcacatcccgtttgatcaattcaaccacattttctgcaccaaattaactcgtttgaaaatgcgtgaaatttacggggttgtgtatgagcaggagatggagaagatgacgctggcgcagacgacggggctggaccagaagcagatcaacaactggttcatcaaccagaggaagcggcactggaagccgacgccggtggcaggcacggccttcccgacgatggaagctgccggaggcggcttccgacactccggccacggcggcggccttgcggcggcggcggcgctgccgctgtacatgggcaggccgttcgttgtggacggcatgtaccggctcgggtcttgaagcctctggggatcgcatggtgtttgcatggtgttttttgcttggtaaatatttgctagcagcttcccatgatcagcctgtgggatggtgaaatggaagaactgatgaatcttcatcacgatctttcctctcatttttttttctttggtgtgtgataaaagctcagatgtaccacgtactactgtctgcttctttgcaaatggatatgtaattgaaagctt</dnaseqindica>|
| + | ==References== |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057942.1 RefSeq:Os03g0771500]|
| + | <references> |
| − | }}
| + | * <ref name="ref1"> Sentoku N, Sato Y, Matsuoka M. Overexpression of rice OSH genes induces |
| − | [[Category:Genes]] | + | ectopic shoots on leaf sheaths of transgenic rice plants. Dev Biol. 2000 Apr |
| − | [[Category:Japonica mRNA]]
| + | 15;220(2):358-64. PubMed PMID: 10753522.</ref> |
| − | [[Category:Oryza Sativa Japonica Group]] | + | * <ref name="ref2"> Holland PW. Evolution of homeobox genes. Wiley Interdiscip Rev Dev Biol. 2013 |
| − | [[Category:Japonica Genes]] | + | Jan-Feb;2(1):31-45. doi: 10.1002/wdev.78. Review. PubMed PMID: 23799629.</ref> |
| − | [[Category:Japonica Chromosome 3]]
| + | </references> |
| − | [[Category:Chromosome 3]]
| + | |
| | + | ==Structured Information== |
| | + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 3]] |
