|
|
| (One intermediate revision by one other user not shown) |
| Line 1: |
Line 1: |
| − | Please input one-sentence summary here.
| + | The rice '''''Os09g0314400''''' was reported as '''''OsPP2C67''''' in 2008 <ref name="ref1" /> by researchers from China. |
| − | | |
| | ==Annotated Information== | | ==Annotated Information== |
| | + | ===Gene Symbol=== |
| | + | *'''''Os09g0314400''''' '''''<=>''''' '''''OsPP2C67''''' |
| | ===Function=== | | ===Function=== |
| − | Please input function information here.
| + | * The protein phosphatase 2Cs (PP2Cs) from various organisms have been implicated to act as negative modulators of protein kinase pathways involved in diverse environmental stress responses and developmental processes.<ref name="ref1" /> |
| − | | + | * Type 2C protein phosphatases directly regulate abscisic acid-activated protein kinases in Arabidopsis.<ref name="ref1" /> <ref name="ref2" /> |
| | ===Expression=== | | ===Expression=== |
| − | Please input expression information here.
| + | * The expression analyses from the researchers provide evidences that PP2C genes in different subfamilies might play different functional roles in distinct signaling pathways.<ref name="ref1" /> |
| − | | + | ===Knowledge extension=== |
| − | ===Evolution=== | + | * The reversible phosphorylation of proteins is a fundamental mechanism by which living organisms modulate cellular processes including cell cycle events, growth factor responses, hormone and environmental stimuli responses, metabolic control, and developmental processes.<ref name="ref1" /> |
| − | Please input evolution information here.
| |
| − | | |
| | You can also add sub-section(s) at will. | | You can also add sub-section(s) at will. |
| − |
| |
| | ==Labs working on this gene== | | ==Labs working on this gene== |
| − | Please input related labs here.
| + | * State Key Laboratory of Crop Biology, College of Life Sciences, Shandong Agricultural University, Taian, Shandong 271018, PR China |
| − | | + | * Biology Department, Millersville University of Pennsylvania, 288 Roddy Hall, 50 E Frederick St, PO Box 1002, Millersville PA, 17551-0302, USA |
| | + | * Department of Chemistry, Fudan University, 220 Handan Road, Shanghai 200433, PR China |
| | + | * Institutes of Biomedical Sciences, Fudan University, 130 Dongan Road, Shanghai 200032, PR China |
| | + | * Centre for Forest Biology & Department of Biology, University of Victoria, Victoria BC, V8W 3N5, Canada |
| | ==References== | | ==References== |
| − | Please input cited references here.
| + | <references> |
| | + | * <ref name="ref1"> |
| | + | Xue T, Wang D, Zhang S, Ehlting J, Ni F, Jakab S, Zheng C, Zhong Y. |
| | + | Genome-wide and expression analysis of protein phosphatase 2C in rice and |
| | + | Arabidopsis. BMC Genomics. 2008 Nov 20;9:550. doi: 10.1186/1471-2164-9-550. |
| | + | PubMed PMID: 19021904; PubMed Central PMCID: PMC2612031. |
| | + | </ref> |
| | + | * <ref name="ref2"> |
| | + | Umezawa T, Sugiyama N, Mizoguchi M, Hayashi S, Myouga F, Yamaguchi-Shinozaki |
| | + | K, Ishihama Y, Hirayama T, Shinozaki K. Type 2C protein phosphatases directly |
| | + | regulate abscisic acid-activated protein kinases in Arabidopsis. Proc Natl Acad |
| | + | Sci U S A. 2009 Oct 13;106(41):17588-93. doi: 10.1073/pnas.0907095106. Epub 2009 |
| | + | Sep 29. PubMed PMID: 19805022; PubMed Central PMCID: PMC2754379. |
| | + | </ref> |
| | + | </references> |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 9]] |
| − | GeneName = Os09g0314400|
| |
| − | Description = Protein phosphatase 2C-like domain containing protein|
| |
| − | Version = NM_001069375.1 GI:115478489 GeneID:4346692|
| |
| − | Length = 6471 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os09g0314400, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 9|Chromosome 9]]|
| |
| − | AP = Chromosome 9:9168725..9175195|
| |
| − | CDS = 9169173..9169280,9169618..9169665,9169775..9169864,9170379..9170462,9171019..9171180<br>,9171629..9171681,9172663..9172707,9173740..9173776,9174112..9174220<br>,9174291..9174658|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008402:9168725..9175195
| |
| − | source=RiceChromosome09
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008402:9168725..9175195
| |
| − | source=RiceChromosome09
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atggctcatcaaaagcgtgaagcaaccagcgacaacggcggtggcgatgaagagtgggcatcaaaacgccccaaagttgtcggcgctgctgctgaaaaggagcacattctgacatctgacgcttcgcatgaaacgaatggcgatgaagctcaaggaggagatgcctctcgaaaggaaaacacggtgtcgacaaacccgtgtgtttcagatgagaaagcagcaaccaactcgaatgtttcaagtggccatggggtgattttgactagtgtggaagctgatgctgcagaagacaagggttgcaggcatactatggaagatgcatgggtgctgcttcctgatgctagcatggaatctccgggaaacctgaggtgcgctcatttcgcaatatatgatggacatggtggtcgcctggctgcagagtatgcacagaaacatttgcatcagaatgttattgcagcaggattaccacgtgagttgatggatgttaaagctgcaaagaaggccatcattgaaggttttcgtagaactgatgagtgcttactgcaagaaagtactaaaggaaactggcaagatggtgcaacagctgtctgtgtctgggtcctggggcagacggtggttgttgcaaatgctggagatgctaaagctgtattagctcgttccacatcagctgatggtgaaggtgcagtggatgatgccaaaagtcaactgaaggctattgttttgaccagagaacataaagcaatctttccacaagaacgtgctcgaatccaaaaggctggaggatctgttggccctaatggcagattacaaggtcgcattgaagtatctagagctttgggtgatcgtcagtttaagaaggttgggctgattgctacaccagacgtccactcctttgaagtaacgagaaaagatcattttattattcttgggtgtgatggcttatggggagtatttggaccaggtgatgctgttgaatttgtgcagaatcaattgaaggagacctcgtcagcgactctggcagtgcggcggctcgtgaaggaagctgttcgtgagaggcgttgcaaggacaactgcactgccgtgctgatcgtcttcaagcactag</cdnaseq>|
| |
| − | AA = <aaseq>MAHQKREATSDNGGGDEEWASKRPKVVGAAAEKEHILTSDASHE TNGDEAQGGDASRKENTVSTNPCVSDEKAATNSNVSSGHGVILTSVEADAAEDKGCRH TMEDAWVLLPDASMESPGNLRCAHFAIYDGHGGRLAAEYAQKHLHQNVIAAGLPRELM DVKAAKKAIIEGFRRTDECLLQESTKGNWQDGATAVCVWVLGQTVVVANAGDAKAVLA RSTSADGEGAVDDAKSQLKAIVLTREHKAIFPQERARIQKAGGSVGPNGRLQGRIEVS RALGDRQFKKVGLIATPDVHSFEVTRKDHFIILGCDGLWGVFGPGDAVEFVQNQLKET SSATLAVRRLVKEAVRERRCKDNCTAVLIVFKH</aaseq>|
| |
| − | DNA = <dnaseqindica>5916..6023#5531..5578#5332..5421#4734..4817#4016..4177#3515..3567#2489..2533#1420..1456#976..1084#538..905#ttcttctctctccgaccctctcgttcaccggcgacggcggcgctacgacggccggcgggctcccgtactccgcttcctcctcctcctcctcaggtttcgtggtcgtgcgctctgttcagctcctctccctttttacggtttttgccgctgcgatttctgctgcgatgagctcgctcgcccgcgctcttagagcgcgtctcgatcgcttcgatgtggtctggggacaaaggagtgatgctgggaacgaagggttcgggtggtggggatgtgggagaatggctactagtgctaggttttggggggtcgatttggaagggtttggttcatgggagattggggaagaggggtggggatctggtagatgcagatgatgaagaggggctcatattttgatttagcttttagcaaatatataaagtatatagcgaaatgcactcacatttcattcatttccttctgtttgtttgtgcatttcagtgcgctggtgaaattgataagaggctgttggaacttggaagctgtatagttcaggtcgtcatggctcatcaaaagcgtgaagcaaccagcgacaacggcggtggcgatgaagagtgggcatcaaaacgccccaaagttgtcggcgctgctgctgaaaaggagcacattctgacatctgacgcttcgcatgaaacgaatggcgatgaagctcaaggaggagatgcctctcgaaaggaaaacacggtgtcgacaaacccgtgtgtttcagatgagaaagcagcaaccaactcgaatgtttcaagtggccatggggtgattttgactagtgtggaagctgatgctgcagaagacaagggttgcaggcatactatggaagatgcatgggtgctgcttcctgatgctagcatggaatctccgggaaacctgaggtctgcctctttctgttcagtttaactcctagcatccaatacttgcagcctgatgtgtagcttgatgcaggtgcgctcatttcgcaatatatgatggacatggtggtcgcctggctgcagagtatgcacagaaacatttgcatcagaatgttattgcagcaggattaccacgtgagttggtctgtttacattatctgcttcctttcaatgttttcactattcatgttctatctgaacttctgttttcctcactgagtgatagtttagtgttagcaaaattgcgcattcattgtttctctatttttcttttttttatcatatgggagtattccatcattagatttatgttttatttcctcttatgctaccttccattaatgagtcatttcagttaggtccgtcacttgatttatttcaatggtatctctagattaatcccttttttgcttgaatgcaatgcacacagtaatttggtttgtgagttacctaatagtaattaaaaatggatttacagatggatgttaaagctgcaaagaaggccatcattgaaggtatttattacatgaatcttagttacttgctgataactgtagactaggattacacttgttgatttttgatggctaagattattcccctggtcagctaaactgtcctatgtactgtacatagacacattgaccttgattccattagcatcccatatactccctctattcaagtttgtctgtcatattttggcctgacacaaagaccaaggacagcaaacatgcttatcatcttcctaatctactcccaggccaatgggtcagcatgcctattgtaacagcccatgcatgcatgatgatcgcagcggaaccaatgatctgtagccaattgtaaatgcgattaatttcacatgcatgcaacgggcagtgctcctgaggcgtccatgcagtggctgattaatttcacgtgcgaactgaaacggccagcacgtcggacgagatgcaactgcatgccaactgcaaatgtgacgatcaaacttgaaaatcagttttttttttaaaaaaaatgatgatcaaacttgaatggagggagtactttatgatgatgagtccaggtgcaatcctttagttttaatttcactgtctggtttggtagaagaaatatattgtttatggaaaacgacaacaggcattgccatcttacgtgtagttccagtgctaagaggaacacaatttcaattccaagctttctctgtttattattgtttttccttcatattagcatattccctgtaagaaaatgatgtgctacaaaaaaaattcttacaaactttttaccagtactgaaatggtacactttcgcatcttttattttccatcaaccaacttattaaatcaaacagttggcattttaaaagaatcttacgtatagcactactcttctctgtacttactatatctatctctccacacatttgatgtttcaagctctttaatttccgttcagtaagtatttattttccatcggtaattagtacattactgatacaccaactgattttatgctctggtacttactttgttggatcttttcaggttttcgtagaactgatgagtgcttactgcaagaaagtactaaaggtacgaggatatattcatatctaggcagaaaccatggaataaaattttaaaaatatttgaaaaatatcacatatggctaaggtgatattagacaatcatacaaaatatcaagatgaaactcctctccatctatgagataggaaatcgagaaacagtgaaaaacaaaataacaaaaaaacaggtatagtgtttcttcattgccattgttaattttatatctcacaaacgaagtctgaatttgttgttaaaaattttgtatggttgtctaattacatcttccctacatttgtgattttccttatatattttctgaacttccatgcaaaagtttccagctaagttgtaggttccactacatattttcccatatctccattactcttctgcaatatccaattcgtgtggaaaagttggcctgcacatttaccatagacctctgctttacagtcacctctgacccaatatagtgtttatggcccagataagaataatatctggccattctactatattggctgaaaattgttattgcaaatctacttaatgttctgcattgttatcagttacctgaccataaatagccttctttggtggttaaaatttgtagctagtggttcgtagtgtatagtttagctgatgctgtcaacaaaatgcatataatgagataattattttggtgagcagcagagctaattagagatactaaaggtctgctcaaattgtctccttttccttctgcttggacaaggagagatatttattatttaatcagattggatttcattcgactttcctatttcacaacaataaaaggaatacatttctgttttggtgacaactaataataaacattgtattgtgcccagcattgaggtagattttgaaactctattatgtaaattttgttagtttcatttttgtttcatatgattttttactctatactactgaatttctacctatttccttattatactataggaaactggcaagatggtgcaacagctgtctgtgtctgggtcctggggcagacggttagttttcagtaacaagggaattttgtgtactcataatattttcacattattatatttttggattttgactttgggagtatcgatagtgacaagatttaagaggtgatagaaatgtgttggtgcttactttcagccctcttagttagaggttctcgatggttcatgagggcccatattttatatcgtgatcatctgcatgtcatttcttgctgagttgtttaaatcatgtggtttactgtacgtaggtccaatctactttttatttgtataagcttaaatcatgtggtttactattttgtttctttcaatgctatgtgctttggtttcagctctgtgctctatagttttaaattttgaactactggatcacaactgttctattgtttatgtagtgaaatatattgtcgattatgtgattgttgtttattttatttttgaaaaaaaggtggttgttgcaaatgctggagatgctaaagctgtattagctcgttccacatcagctgatggtgaaggtgcagtggatgatgccaaaagtcaactgaaggctattgttttgaccagagaacataaagcaatctttccacaagaacgtgctcgaatccaaaaggtaacttgttgctttactttcaacatttatttcagttttcctgccaaatttcatctcagtttcgttttgaaagtttaaaatgtatattctgttttgtgcactgttatttaatataatgaagtcctttcttgctctagattttccaatgtaatcatgctgcatgcaccgtaacctgttaaacctaatctgattatgctacacaactgcaaatatgaatgtagctctgcgttgttaatatccgttttcattatgggttattccttgaacaacttaatgcatttgtgcttcaatcatatgccggtgattaccctacttttatgtggtttcagttagcttgtttatattatgagtatgttatcatttcttgatttattgctttgcaaaaggtttcagatccttttttgatttgcttcatgtcgtttatttagtttagtcccttgtggttttgatgaattggcaattactatatgagcttgttagttctatcattatattttgattttgattttgatttgtgttgactcttgattcattttaacatgttttccctacaaaggctggaggatctgttggccctaatggcagattacaaggtcgcattgaagtatctagagctttgggtgatcgtcagtttaagaaggtttgctgttgcagatacatttctcataagcagttgtgcacatttccacattgctttttgaaccaactatgaagtgtcagatttctggctatatgctagcactgttgtttcagctaacgttcgaccctattaactgctggggatttaagttgtaaacagacgttgtggaagcttgctagcatgttttaggtctttgcgaggctgcaagccttcacaaaattatgatactagtatatttccctgtttctctgttcatctctttgtctggataattggataaactaacagtggctttctcgatatggcaaacctaacaatgtgccatttgcatatattgaattatagtagtgtatgaattctgttgggcaactggccatgcctggtcttgtgaagttctttcaaagataaaatgtgaaatcctatgttcttttgacatgcttttggaaagcctgctttagccataggaaattgctacatttttatattacgatctcttatgtgccccactctgcaggttgggctgattgctacaccagacgtccactcctttgaagtaacgagaaaagatcattttattattcttgggtgtgatggcttatggggagtacgtcctttttctcttctcccctttatcgccaatcgttcttgtggtctgcttcagtaatatactttttccgtgttgttttaacatgtgctgtaaatggatgtgccaggtatttggaccaggtgatgctgttgaatttgtgcagaatcaattgaaggtgctgtttgtttctgttatttgcatctccaagtgcattcgtttcctttccccactactccatctaacagcaattatctaccgtagtgaaagcatttatgatcagattacgctggcacacaaaatctaaagccatgtgacccgattatgattgaatttaatacgatcaattccgcaaagcattactctctctgttccaaaatatagcaacctaggatcggagaaaacatatcctagggggcctatttattttaagttgctatattttgggatggatgaagtatatgaacaccaaatttctcaaccctaaaactttgttcaaccgtcaatcattgcaggagacctcgtcagcgactctggcagtgcggcggctcgtgaaggaagctgttcgtgagaggcgttgcaaggacaactgcactgccgtgctgatcgtcttcaagcactagaattcttttcacccactgcgaccgttttcgttttttcaccaagctgaactggggaaacgaatcatctgacaacgaacaatatctagttctattgttaccttatcctgcactgcgacgttctggccgtgtctgtattgtgatcgagacccttgtgcactgctgtagccgtgtatgtattgtgatcgagacctttgtgcactgctgtagcttatgcggttatgccacctctggaatgaatgaaatattggagcccctccactccaaaatatagctttatagtacgagattagatacaacctaacaacggatttgaataggttctttgttcagattcgttgcactatggtatgactaatccagtaaattaggttgctatattttgagatttttgagatggagggagtatttttctagatattggagtaattcctggtactactagattttt</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001069375.1 RefSeq:Os09g0314400]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 9]]
| |
| − | [[Category:Chromosome 9]]
| |
