Difference between revisions of "Os04g0568700"

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(Created page with "{{JaponicaGene| GeneName = Os04g0568700| Description = Similar to Heat stress transcription factor Spl7 (Heat shock transcription factor) (Heat shock factor RHSF10)| Versio...")
 
 
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{{JaponicaGene|
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The rice '''''Os04g0568700''''' was reported as '''''OsHsf-14''''' in 2008 <ref name="ref1" /> by researchers from China.
GeneName = Os04g0568700|
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==Annotated Information==
Description = Similar to Heat stress transcription factor Spl7 (Heat shock transcription factor) (Heat shock factor RHSF10)|
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===Gene Symbol===
Version = NM_001060126.1 GI:115459981 GeneID:4336701|
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*'''''Os04g0568700''''' '''''<=>''''' '''''OsHsf-14'''''
Length = 1274 bp|
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===Function===
Definition = Oryza sativa Japonica Group Os04g0568700, complete gene.|
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* The heat shock transcription factors (HSFs) are the major heat shock factors regulating the heat stress response.
Source = Oryza sativa Japonica Group
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* The heat shock transcription factors (HSFs) participate in regulating the expression of heat shock proteins (HSPs), which are critical in the protection against stress damage and many other important biological processes.
 +
===Expression===
 +
* Expression data analysis indicates that HSF proteins are widely expressed in plants.
 +
===Evolution===
 +
* Phylogenetic analyses resulted in the identification of three major clusters of orthologous genes that contain members belonging to both species, which must have been represented in their common ancestor before the taxonomic splitting of the angiosperms.
 +
You can also add sub-section(s) at will.
 +
==Labs working on this gene==
 +
* School of Life Sciences, Shanghai University, Shanghai 200444, China
 +
* College of Light Industry and Food Sciences, South China University of Technology, Guangzhou 510640, China
 +
==References==
 +
<references>
 +
* <ref name="ref1">
 +
Guo J, Wu J, Ji Q, Wang C, Luo L, Yuan Y, Wang Y, Wang J. Genome-wide analysis
 +
of heat shock transcription factor families in rice and Arabidopsis. J Genet
 +
Genomics. 2008 Feb;35(2):105-18. doi: 10.1016/S1673-8527(08)60016-8. PubMed PMID:
 +
18407058.
 +
</ref>
 +
</references>
 +
 
 +
==Structured Information==
  
  ORGANISM  Oryza sativa Japonica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Japonica Chromosome 4|Chromosome 4]]|
 
AP = Chromosome 4:28972921..28974194|
 
CDS = 28972991..28973197,28973300..28974010|
 
GCID = <gbrowseImage1>
 
name=NC_008397:28972921..28974194
 
source=RiceChromosome04
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=NC_008397:28972921..28974194
 
source=RiceChromosome04
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>atggcgtcgccggcggcggggacgccgccgttcttgacgaagacgtacgcgatggtggaggacccgagcaccgatgagaccatctcgtggaacgactccggcacggccttcgtggtgtggcgccccgccgagttcgcccgcgacctcctccccaagcacttcaagcacagcaacttctcctccttcgtgcgccagctcaacacctacggattcaagaaggtggtggcggataggtgggagttcgccaacgactgcttcaggagaggggagaagcacctgctcggtgggatacagaggcggaaggggtctgggaccggaggcgcgggggcggcgccggcggggggcataccgacggcgataccgatctcgtccccgccgacgagctccggcggggagcccgcggtgtcgtcgtcgccgccgcgcggggcggcggggatcgcggcgggggtgagcggcgcggtggccgagctggaggaggagaacgcccggctgcggcgagagaacgcgaggctggcgcgggagctggcacgcgcgcggcgggtctgcgacggcgtgcggcgcctcgtgtcgcggtacgaccacgaccacggcggcggggaggaggaagcgggggagggcgacgtgaagccgatgctgttcggcgtggcgatcggcggcaaaagatcgcgcgaggagaacggggaagacgaggaggaggaggaggaggaaggggctgacgaggacggcgaagacgatgaggtggaggaagacgacgaggagagagagaggcacgcggcgcggcgggtccccgtgagggaggggaaggtcaggaggacgacggagctgtcggatctggacgtgctcgcgctgtccgtgcgggcggcggccgcggcgaggccgggcggggcctcccgtgaccgcaagagctcggtctcgtaa</cdnaseq>|
 
AA = <aaseq>MASPAAGTPPFLTKTYAMVEDPSTDETISWNDSGTAFVVWRPAE                    FARDLLPKHFKHSNFSSFVRQLNTYGFKKVVADRWEFANDCFRRGEKHLLGGIQRRKG                    SGTGGAGAAPAGGIPTAIPISSPPTSSGGEPAVSSSPPRGAAGIAAGVSGAVAELEEE                    NARLRRENARLARELARARRVCDGVRRLVSRYDHDHGGGEEEAGEGDVKPMLFGVAIG                    GKRSREENGEDEEEEEEEGADEDGEDDEVEEDDEERERHAARRVPVREGKVRRTTELS                    DLDVLALSVRAAAAARPGGASRDRKSSVS</aaseq>|
 
DNA = <dnaseqindica>71..277#380..1090#ctctctggatcttcttctccgtctcctccccggtctcgtgtgagcgctactcccggcccacaggttcttcatggcgtcgccggcggcggggacgccgccgttcttgacgaagacgtacgcgatggtggaggacccgagcaccgatgagaccatctcgtggaacgactccggcacggccttcgtggtgtggcgccccgccgagttcgcccgcgacctcctccccaagcacttcaagcacagcaacttctcctccttcgtgcgccagctcaacacctacgtgcgtctccctccgctgaacactctctctccccctctctaatctcagtttggtttcggtagatcgacgagttttccgacagatttgcgtgtgttggtgcagggattcaagaaggtggtggcggataggtgggagttcgccaacgactgcttcaggagaggggagaagcacctgctcggtgggatacagaggcggaaggggtctgggaccggaggcgcgggggcggcgccggcggggggcataccgacggcgataccgatctcgtccccgccgacgagctccggcggggagcccgcggtgtcgtcgtcgccgccgcgcggggcggcggggatcgcggcgggggtgagcggcgcggtggccgagctggaggaggagaacgcccggctgcggcgagagaacgcgaggctggcgcgggagctggcacgcgcgcggcgggtctgcgacggcgtgcggcgcctcgtgtcgcggtacgaccacgaccacggcggcggggaggaggaagcgggggagggcgacgtgaagccgatgctgttcggcgtggcgatcggcggcaaaagatcgcgcgaggagaacggggaagacgaggaggaggaggaggaggaaggggctgacgaggacggcgaagacgatgaggtggaggaagacgacgaggagagagagaggcacgcggcgcggcgggtccccgtgagggaggggaaggtcaggaggacgacggagctgtcggatctggacgtgctcgcgctgtccgtgcgggcggcggccgcggcgaggccgggcggggcctcccgtgaccgcaagagctcggtctcgtaacggttgttgacttgctgttgattttatatgcggcgtaaaactgagaaaattggatggcacatgagccaaattgaattgtagttcgtaccagtaccaagcaaactgcagccactttacagggtactaaactatactttcgggagtagtaggaacattgtagccttggttgtcatgatgatgtaaa</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001060126.1 RefSeq:Os04g0568700]|
 
}}
 
 
[[Category:Genes]]
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Japonica mRNA]]

Latest revision as of 03:45, 1 April 2017

The rice Os04g0568700 was reported as OsHsf-14 in 2008 [1] by researchers from China.

Annotated Information

Gene Symbol

  • Os04g0568700 <=> OsHsf-14

Function

  • The heat shock transcription factors (HSFs) are the major heat shock factors regulating the heat stress response.
  • The heat shock transcription factors (HSFs) participate in regulating the expression of heat shock proteins (HSPs), which are critical in the protection against stress damage and many other important biological processes.

Expression

  • Expression data analysis indicates that HSF proteins are widely expressed in plants.

Evolution

  • Phylogenetic analyses resulted in the identification of three major clusters of orthologous genes that contain members belonging to both species, which must have been represented in their common ancestor before the taxonomic splitting of the angiosperms.

You can also add sub-section(s) at will.

Labs working on this gene

  • School of Life Sciences, Shanghai University, Shanghai 200444, China
  • College of Light Industry and Food Sciences, South China University of Technology, Guangzhou 510640, China

References

  1. Guo J, Wu J, Ji Q, Wang C, Luo L, Yuan Y, Wang Y, Wang J. Genome-wide analysis of heat shock transcription factor families in rice and Arabidopsis. J Genet Genomics. 2008 Feb;35(2):105-18. doi: 10.1016/S1673-8527(08)60016-8. PubMed PMID: 18407058.

Structured Information