Difference between revisions of "Os01g0132766"

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Please input one-sentence summary here.
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The rice '''Os01g0132766''' was reported as '''''ZOS1-03''''' in 2007 <ref name="ref1" /> by researchers from the India. It is a member of C2H2 transcription factor gene family.
  
 
==Annotated Information==
 
==Annotated Information==
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===Gene Symbol===
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*'''''Os01g0132766''''' '''''<=>''''' '''''ZOS1-03'''''
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===Function===
 
===Function===
Please input function information here.
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* The Cys 2/His 2 zinc-finger proteins (ZFPs) constitute one of the largest transcription factor class regulatory protein families in eukaryotes. <ref name="ref1" />
 
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* The classical C2H2 zinc finger domain is involved in a wide range of functions and can bind to DNA, RNA and proteins.  
===Expression===
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* Plant Q-type C2H2 zinc finger transcription factors play an important role in plant tolerance to various environmental stresses such as drought, cold, osmotic stress, wounding and mechanical loading.  
Please input expression information here.
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* The ZFPs not only interact with DNA or chromatin but their interactions with RNA and other proteins are also well documented in lower as well as higher eukaryotes.
 
 
===Evolution===
 
Please input evolution information here.
 
 
 
You can also add sub-section(s) at will.
 
  
 
==Labs working on this gene==
 
==Labs working on this gene==
Please input related labs here.
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* Interdisciplinary Centre for Plant Genomics and Department of Plant Molecular Biology, University of Delhi South Campus, Benito Juarez Road, New Delhi 110021, India
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* Division of Genetics, Indian Agricultural Research Institute, New Delhi 110012, India
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* Plant Disease Resistance Research Unit, National Institute of Agrobiological Sciences, 2-1-2 Kannondai, Tsukuba 305-8602 Ibaraki, Japan
  
 
==References==
 
==References==
Please input cited references here.
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<references>
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</ref>
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* <ref name="ref1">
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Englbrecht CC, Schoof H, Böhm S. Conservation, diversification and expansion
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of C2H2 zinc finger proteins in the Arabidopsis thaliana genome. BMC Genomics.
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2004 Jul 5;5(1):39. PubMed PMID: 15236668; PubMed Central PMCID: PMC481060.
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</ref>
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</references>
  
 
==Structured Information==
 
==Structured Information==
{{JaponicaGene|
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[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 01]]
GeneName = Os01g0132766|
 
Description = Zinc finger, C2H2-type domain containing protein|
 
Version = NM_001185233.1 GI:297719600 GeneID:9268514|
 
Length = 1298 bp|
 
Definition = Oryza sativa Japonica Group Os01g0132766, complete gene.|
 
Source = Oryza sativa Japonica Group
 
 
 
  ORGANISM  Oryza sativa Japonica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
 
AP = Chromosome 1:1800983..1802280|
 
CDS = 1801335..1802138|
 
GCID = <gbrowseImage1>
 
name=NC_008394:1800983..1802280
 
source=RiceChromosome01
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=NC_008394:1800983..1802280
 
source=RiceChromosome01
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>atgagcatgacgagccccaggctaaagctcttcggcttcgacgtctccgaggaggagacggcggagcacgaggagcagtactcggctgagccggagagcgcgccggtctgcgggggcaacggtggcggcggaggcggcggctcggactcgtcctcgtcgtctactacgaccaccacgacggccacggccggcggcgacgggcggaggtacgagtgccagtactgctgccgcgagttcgccaactcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcggcagcagctcaagcgggcgcagctgcaggcggcggccgcggccgccggccgtgtcgcgggcggcgccgccgcgctctacccgcgcgccaacccgatggtctccgccttcgctccgaccccccacctcctcggcggcggcgaggcggggcccaccagctgggtctacttctccccgcgcgccgccgcggtggccggcggggcgcaaggccagcagttccacgtgtcccacggctgcgtcttccccgcccgcggcgccggccctgccgccgtcgccgccgcctcgccggctgtgttctcgtacactccggcgacgtctgccgccgccgtcgccgcggcctcggcaccctacgtgacgacggacgagcaccacgggcggaggatccacgcgagctcggcggccagccttgcgagatatcccggtccggcgatggtggtggcggagccggtggccaccgtgccggaggacacctgcctggggcttgacctccagctcagccttgcgcccgccggcttgtga</cdnaseq>|
 
AA = <aaseq>MSMTSPRLKLFGFDVSEEETAEHEEQYSAEPESAPVCGGNGGGG                    GGGSDSSSSSTTTTTTATAGGDGRRYECQYCCREFANSQALGGHQNAHKKERQQLKRA                    QLQAAAAAAGRVAGGAAALYPRANPMVSAFAPTPHLLGGGEAGPTSWVYFSPRAAAVA                    GGAQGQQFHVSHGCVFPARGAGPAAVAAASPAVFSYTPATSAAAVAAASAPYVTTDEH                    HGRRIHASSAASLARYPGPAMVVAEPVATVPEDTCLGLDLQLSLAPAGL</aaseq>|
 
DNA = <dnaseqindica>143..946#atgcacatccatccaacttaatttgacagcaactcactgcagcttagctctctttctctcttagttctcttcttctgtagcaagtaccaccagtgccaagcttctacagtgtgctgctcgctagctactcgtctttgcagccatgagcatgacgagccccaggctaaagctcttcggcttcgacgtctccgaggaggagacggcggagcacgaggagcagtactcggctgagccggagagcgcgccggtctgcgggggcaacggtggcggcggaggcggcggctcggactcgtcctcgtcgtctactacgaccaccacgacggccacggccggcggcgacgggcggaggtacgagtgccagtactgctgccgcgagttcgccaactcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcggcagcagctcaagcgggcgcagctgcaggcggcggccgcggccgccggccgtgtcgcgggcggcgccgccgcgctctacccgcgcgccaacccgatggtctccgccttcgctccgaccccccacctcctcggcggcggcgaggcggggcccaccagctgggtctacttctccccgcgcgccgccgcggtggccggcggggcgcaaggccagcagttccacgtgtcccacggctgcgtcttccccgcccgcggcgccggccctgccgccgtcgccgccgcctcgccggctgtgttctcgtacactccggcgacgtctgccgccgccgtcgccgcggcctcggcaccctacgtgacgacggacgagcaccacgggcggaggatccacgcgagctcggcggccagccttgcgagatatcccggtccggcgatggtggtggcggagccggtggccaccgtgccggaggacacctgcctggggcttgacctccagctcagccttgcgcccgccggcttgtgacttcaccgccgcgcttgcatgagttcgcgcgcgtggtcgacgacgacgacgacgatccggccacactactgcgcgagagcgagctagctactgtttactatggtaaaaaagaattaattacctactagctgcctacgtccgtagttgatccgtactaagatccctctccctggctaggtaattagcactagtagtacttaagtaaattaagtatttttagcttctgggacttggagagctgcatgtaagctgcctgtaactcctgttcttattgatatgcatgatttcagagagatcaatgaccatggacgccatgtaaatttttgtccccaccctatagcttgttccttgc</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001185233.1 RefSeq:Os01g0132766]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 1]]
 
[[Category:Chromosome 1]]
 

Latest revision as of 10:32, 5 April 2017

The rice Os01g0132766 was reported as ZOS1-03 in 2007 [1] by researchers from the India. It is a member of C2H2 transcription factor gene family.

Annotated Information

Gene Symbol

  • Os01g0132766 <=> ZOS1-03

Function

  • The Cys 2/His 2 zinc-finger proteins (ZFPs) constitute one of the largest transcription factor class regulatory protein families in eukaryotes. [1]
  • The classical C2H2 zinc finger domain is involved in a wide range of functions and can bind to DNA, RNA and proteins.
  • Plant Q-type C2H2 zinc finger transcription factors play an important role in plant tolerance to various environmental stresses such as drought, cold, osmotic stress, wounding and mechanical loading.
  • The ZFPs not only interact with DNA or chromatin but their interactions with RNA and other proteins are also well documented in lower as well as higher eukaryotes.

Labs working on this gene

  • Interdisciplinary Centre for Plant Genomics and Department of Plant Molecular Biology, University of Delhi South Campus, Benito Juarez Road, New Delhi 110021, India
  • Division of Genetics, Indian Agricultural Research Institute, New Delhi 110012, India
  • Plant Disease Resistance Research Unit, National Institute of Agrobiological Sciences, 2-1-2 Kannondai, Tsukuba 305-8602 Ibaraki, Japan

References

  1. 1.0 1.1 Englbrecht CC, Schoof H, Böhm S. Conservation, diversification and expansion of C2H2 zinc finger proteins in the Arabidopsis thaliana genome. BMC Genomics. 2004 Jul 5;5(1):39. PubMed PMID: 15236668; PubMed Central PMCID: PMC481060.

Structured Information