Difference between revisions of "Os07g0492000"
| (6 intermediate revisions by 3 users not shown) | |||
| Line 1: | Line 1: | ||
| − | + | The rice '''''Os07g0492000''''' was reported as '''''NDK1''''' in (2005) <ref name="ref1" /> by researchers from China. | |
==Annotated Information== | ==Annotated Information== | ||
| + | ===Gene Symbol=== | ||
| + | *'''''Os04g0620000''''' '''<=>''' '''''NDK, NDK-1, NDK1, NDKR, OsNDPK1, rNDK''''' | ||
| + | |||
===Function=== | ===Function=== | ||
| − | + | * Nucleoside diphosphate kinase (NDK) is a ubiquitous enzyme found in all organisms and cell types, and catalyzes the transfer of the phosphoryl group from a nucleoside triphosphate to a nucleoside diphosphate. <ref name="ref1" /><ref name="ref2" /> | |
| − | + | * The enzyme is involved in and required for coleoptile elongation in rice as the level of the rice NDK (rNDK) changes during seed germination and the early stages of seedling growth. | |
===Expression=== | ===Expression=== | ||
| − | + | * The expression of rice NDK gene is up-regulated in the growing coleoptiles when the anaerobic stress persists. | |
===Evolution=== | ===Evolution=== | ||
| − | When OsNDPK1 was aligned with other rice NDPK isoforms, it proved to be moderately similar to the conserved regions of NP922751 (76% identity), OsNDPK2 (67% identity), and OsNDPK3 (55% identity). | + | * When OsNDPK1 was aligned with other rice NDPK isoforms, it proved to be moderately similar to the conserved regions of NP922751 (76% identity), OsNDPK2 (67% identity), and OsNDPK3 (55% identity). |
You can also add sub-section(s) at will. | You can also add sub-section(s) at will. | ||
==Labs working on this gene== | ==Labs working on this gene== | ||
| − | + | * Biology Group, Research Division, National Synchrotron Radiation Research Center, Hsinchu 30076, Taiwan | |
| − | National University, | + | * Department of Life Sciences and Structural Biology Program, National Tsing-Hua University, Hsinchu 30076, Taiwan |
| + | * Department of Physics, National Tsing-Hua University, Hsinchu 30076, Taiwan | ||
| + | * Institute of Biological Chemistry, Academia Sinica, Taipei 11529, Taiwan | ||
==References== | ==References== | ||
| − | + | <references> | |
| − | + | <ref name="ref1">Huang J Y, Chang T, Chang C Y, et al. Crystal structure of nucleoside diphosphate kinase required for coleoptile elongation in rice (< i> Oryza sativa</i> L.)[J]. Journal of structural biology, 2005, 150(3): 309-318.</ref> | |
| − | + | <ref name="ref2"> Cho S M, Shin S H, Kim K S, et al. Enhanced expression of a gene encoding a nucleoside diphosphate kinase 1 (OsNDPK1) in rice plants upon infection with bacterial pathogens[J]. Mol Cells, 2004, 18(3): 390-395.</ref> | |
| − | + | </references> | |
==Structured Information== | ==Structured Information== | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
[[Category:Genes]] | [[Category:Genes]] | ||
[[Category:Japonica mRNA]] | [[Category:Japonica mRNA]] | ||
Latest revision as of 14:59, 6 May 2017
The rice Os07g0492000 was reported as NDK1 in (2005) [1] by researchers from China.
Contents
Annotated Information
Gene Symbol
- Os04g0620000 <=> NDK, NDK-1, NDK1, NDKR, OsNDPK1, rNDK
Function
- Nucleoside diphosphate kinase (NDK) is a ubiquitous enzyme found in all organisms and cell types, and catalyzes the transfer of the phosphoryl group from a nucleoside triphosphate to a nucleoside diphosphate. [1][2]
- The enzyme is involved in and required for coleoptile elongation in rice as the level of the rice NDK (rNDK) changes during seed germination and the early stages of seedling growth.
Expression
- The expression of rice NDK gene is up-regulated in the growing coleoptiles when the anaerobic stress persists.
Evolution
- When OsNDPK1 was aligned with other rice NDPK isoforms, it proved to be moderately similar to the conserved regions of NP922751 (76% identity), OsNDPK2 (67% identity), and OsNDPK3 (55% identity).
You can also add sub-section(s) at will.
Labs working on this gene
- Biology Group, Research Division, National Synchrotron Radiation Research Center, Hsinchu 30076, Taiwan
- Department of Life Sciences and Structural Biology Program, National Tsing-Hua University, Hsinchu 30076, Taiwan
- Department of Physics, National Tsing-Hua University, Hsinchu 30076, Taiwan
- Institute of Biological Chemistry, Academia Sinica, Taipei 11529, Taiwan
References
- ↑ 1.0 1.1 Huang J Y, Chang T, Chang C Y, et al. Crystal structure of nucleoside diphosphate kinase required for coleoptile elongation in rice (< i> Oryza sativa</i> L.)[J]. Journal of structural biology, 2005, 150(3): 309-318.
- ↑ Cho S M, Shin S H, Kim K S, et al. Enhanced expression of a gene encoding a nucleoside diphosphate kinase 1 (OsNDPK1) in rice plants upon infection with bacterial pathogens[J]. Mol Cells, 2004, 18(3): 390-395.
