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| − | Please input one-sentence summary here.
| + | The rice gene Os07g0191600 was reported as '''''STR2''''' in 2012<ref name="ref1" /> by researchers from Switzerland, Korea, USA and France. |
| | | | |
| | ==Annotated Information== | | ==Annotated Information== |
| | + | ===Gene Symbol=== |
| | + | *'''''Os07g0191600 <=> STR2，OsSTR2 |
| | + | |
| | ===Function=== | | ===Function=== |
| − | Please input function information here.
| + | * The half-size ABC transporters STR1 and STR2 are indispensable for mycorrhizal arbuscule formation in rice. |
| | + | ===Mutation=== |
| | + | * Mutation of either of the Oryza sativa (rice) ABCG transporters blocked arbuscule growth of different AM fungi at a small and stunted stage, recapitulating the phenotype of Medicago truncatula stunted arbuscule 1 and 2 (str1 and str2) mutants that are deficient in homologous ABCG genes. |
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| − | ===Expression=== | + | ===Sublocalization=== |
| − | Please input expression information here.
| + | * The STR1/STR2 complex resides in the peri-arbuscular membrane, which represents the plant border of the apoplastic symbiotic interface |
| | | | |
| | ===Evolution=== | | ===Evolution=== |
| − | Please input evolution information here.
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| | You can also add sub-section(s) at will. | | You can also add sub-section(s) at will. |
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| | ==Labs working on this gene== | | ==Labs working on this gene== |
| − | Please input related labs here.
| + | *Department of Plant Molecular Biology, University of Lausanne, Biophore Building, 1015 Lausanne, Switzerland, |
| | + | *Boyce Thompson Institute for Plant Research, Cornell University, Ithaca, NY 14853, USA, |
| | + | *Crop Biotech Institute and Department of Plant Molecular Systems Biotechnology, Kyung Hee University, Yongin 446-701, Korea, |
| | + | *CIRAD, UMR AGAP 1096, TA 108/03 Avenue Agropolis, 34398 Montpellier Cedex 5, France, and |
| | + | *Department of Plant Biology, University of California Davis, Davis, CA 95616, USA |
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| | ==References== | | ==References== |
| − | Please input cited references here.
| + | <references> |
| | + | * <ref name="ref1"> |
| | + | Gutjahr C, Radovanovic D, Geoffroy J, Zhang Q, Siegler H, Chiapello M, Casieri |
| | + | L, An K, An G, Guiderdoni E, Kumar CS, Sundaresan V, Harrison MJ, Paszkowski U. |
| | + | The half-size ABC transporters STR1 and STR2 are indispensable for mycorrhizal |
| | + | arbuscule formation in rice. Plant J. 2012 Mar;69(5):906-20. doi: |
| | + | 10.1111/j.1365-313X.2011.04842.x. PubMed PMID: 22077667. |
| | + | </ref> |
| | + | </references> |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 7]] |
| − | GeneName = Os07g0191600|
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| − | Description = ABC transporter related domain containing protein|
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| − | Version = NM_001188160.1 GI:297725450 GeneID:9272142|
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| − | Length = 3917 bp|
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| − | Definition = Oryza sativa Japonica Group Os07g0191600, complete gene.|
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| − | Source = Oryza sativa Japonica Group
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| − | | |
| − | ORGANISM Oryza sativa Japonica Group
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| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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| − | clade; Ehrhartoideae; Oryzeae; Oryza.
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| − | |
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| − | Chromosome = [[:category:Japonica Chromosome 7|Chromosome 7]]|
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| − | AP = Chromosome 7:4972834..4976750|
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| − | CDS = 4975950..4976750|
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| − | GCID = <gbrowseImage1>
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| − | name=NC_008400:4972834..4976750
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| − | source=RiceChromosome07
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| − | preset=GeneLocation
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| − | </gbrowseImage1>|
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| − | GSID = <gbrowseImage2>
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| − | name=NC_008400:4972834..4976750
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| − | source=RiceChromosome07
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| − | preset=GeneLocation
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| − | </gbrowseImage2>|
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| − | CDNA = <cdnaseq>atggcgcaccggcacgtcggcgacctggaggcggcggcgtacggcggcggccggttcgggttcaccggcggcctggagttcaccgggctgacgtacacggtgaccaagaagcagcgcggcgccggcggcgagtgggagaagaaggaggtggacctgctgcacgaggtcaccgggtacgcccccaagggctgcgtcaccgccgtgatgggccccagcggcgccggcaagtcgacgctcctcgacgcgctcgccggccgcatcgccgcccgcctcggcggccgcgtcgcgctcgacggcgtggaggtgagccccggcctcgtcaagcgctgctccgcctacgtcatgcaggacgaccgcctcttccccatgctcaccgtccgcgagaccctcatgttcgccgccgacctccgcctcggcgcctccgtccccgccgccgacaagcgccgccgcgtcgacgccctcatcgaccagctcggcctcgcggcgtccgggaacacgtacatcggcgacgaggggacccggggcgtgtccggcggcgagcggcggcgtgtgtcgatcggcgtggacatcatccatggccccgcgctgctgttcctcgacgagccgacgtccggtctggactccacgagcgcgcacagcgtggtcgagaaggtgcgcgacatcgcctgcgccgggagcaccgtcgtgctcaccatccaccagccgtcgtcgcgcatcctgcagctgctcgaccacctcgtcattctcgcgcgtgggcagctcatgtacagcggcgcgccacgggaggtcgccgcccacctc</cdnaseq>|
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| − | AA = <aaseq>MAHRHVGDLEAAAYGGGRFGFTGGLEFTGLTYTVTKKQRGAGGE WEKKEVDLLHEVTGYAPKGCVTAVMGPSGAGKSTLLDALAGRIAARLGGRVALDGVEV SPGLVKRCSAYVMQDDRLFPMLTVRETLMFAADLRLGASVPAADKRRRVDALIDQLGL AASGNTYIGDEGTRGVSGGERRRVSIGVDIIHGPALLFLDEPTSGLDSTSAHSVVEKV RDIACAGSTVVLTIHQPSSRILQLLDHLVILARGQLMYSGAPREVAAHL</aaseq>|
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| − | DNA = <dnaseqindica>3117..3917#aacacacaaaagcaacgccaagcctcgcacgcgcgcgaggccgacgcaaggaggagaggctgccccggggggagagagagatcacccgcctcgccgcccgcccgcgccgcggcggatcgatggagctgttcgagcgcgcgaggacggtgcggctgcgcggccaccatgacaagtacctgtacgcggaggaggacgagtcgcgcgtctcccaggaccggagcgcctcgtccccgaacgcgcggtggtccgtcgagccggtcccccacgcccccggcgtcctccgcctccgcagccactacggccgctacctctccgcctccaacgagcccttcctcctcggcgtcaccggccgcaaggtcctccaggccctcccccaccgcctcgactcctccgtcgagtgggtccccgtccgcgacggcgcccacgcccgcctccgcacccgctacggcaactacctccgcgccaacggcggcctcccgccgtggcgcaactccgtcacccacgacgtcccccaccgccacgccgggtggatcctctggaccgtcgaggtcgtcgaggtcctcccggaatccctcgtccccgcccccatcgcctccgacgacgaccccgccgcgccgcattacaagacaccttctcgcgggccctctcccgtgccgacgccggcgctggcgcctgcttcgccgccgcggcaccgtccggcgagcccaccttcgtacttagcgcggccaccgccgccgccaccgggctacatcgagccaccacagggatacatcgagccacctccaccggagcccaccctggcgagaattgaggtccgtactttccacgcccgccatctgctcgacgaattgtacagcccaacagggatgttagatgaaaatgccaagtgcttattgttgttgcggacgcattttgccattttagtccacagaatccttctcgctgccgctgcacaaggtggatgggcgggcgatccactaccacattggggatgacaacggcgacatcggcgatgatcaggaaggacactcattcacgttcaacgggactagcctggaggagcttttggagaggttgcaggaggagacggggctcaacgacgtgattatctgctctcgtagcccgatcaatgggaagctcatgcccctccgcttgcagctgccgcccaacaacgccgccatgcatatcgtgctcgtgcgtgagtcatcaaaaggtgggcttttcttttcatcagttattgctcataccattagattcacatttcacaccggtggaacatgatatgttgaatcatggaatttaacgatacctactaaatttctatataccattagattgatacttgataggcctcctataagcacaatataccatcctttcttcagtgttagctgaagtgctcaactgtgtataaaatggtgaacttcaaacataaaaataggttaattcagaatgctaacattttaagttgagtttttggttatgcagatatttgtcgttatttagtcaatgcacactgagccaacatcccctaaacatttgctaaatcctgtatagtagatgctagtttaaattcctttattgaaatagctgcaacacaataatattgtggcatgccatgaccttatcatatttactgaccatcaaatatacttggcggaaaatggaagctaaaatgcatattgataagatatcgattttgtgtaaagttaaaattttcaagttaggacgttttagtgactaacactacgattttgttcttatttcttactctgatagaaatgttttatctttcagtggcaaaatcatttccatgaccatgtggtaaaatttgaagagggtggtgtcagcgactcaaatcaagcaagaactgtgcatctgttgtatatattgtaatccctgtttattatcagttccactggctaccataatcaagtattattcttccatcttcaggagatctcattcttgtaagtatttgcttctgtcaacttttttatcatttattcaacaggtagagtgatctctggtagctaaagacccttcaaaatgcctatcctgtcattcctcagttctatagaataaactattctctaggaaatccacttgttctccttttccattttgattttaatacataaaatcagaatgtcattgttaattaattacccgtgaaggtatattactgcagaaaaaccagaaacttatttcatatttgtagattaatcccatatatgttcttagcatgaacaaccgatctaacttctggggcaatttcaatggtctgggaccatggggtctgttttgacatgcatggcttcaactcgaccttcctcagtacgcgatgagaattgttgaggggactatgctggtattttgcttgagaccttttttattttaacggtcattacactacaagttacatataattacatctgtcaaatttttattagaaaatttgtcgataaatatatagcaaattcgatccaatgttgatgaagctttcaggccttgttcggaatgatccgaacccagcctttcctataggcgaatgtgccggggcacaacaagcaaggccttacagttcagctgatttttttaaaaacttaccttcaataaacaaataggccgaattttttgaattgtggatgcatctttacatttcggaatcaaggtaatgataccatagtttaaccttgcaatatcaattctaccatcatggaagtcatcaattaattatttcaaatcagatctaatgatttcccacaaaattttatagaattcaatggggggaaatcccaattcgttttgcttttaccaacaagatgggataatccttaggatttcctttctccaaattcatggatattggagctcgttcactgctgttctatgcttctagacgtaggagaaaacaaccaaaaaaaactgaccttacaagacgttcactccgatgacacgttacactcttcaccctcatttctgtcgccccaacacttgtatctaccaaccttccaaaatcacgaagctgttagtcccatgcaataacatcacaaagccactttatatgcgtaagcatttgcacacaagctagagacactcacccactgctcgccatggcgcaccggcacgtcggcgacctggaggcggcggcgtacggcggcggccggttcgggttcaccggcggcctggagttcaccgggctgacgtacacggtgaccaagaagcagcgcggcgccggcggcgagtgggagaagaaggaggtggacctgctgcacgaggtcaccgggtacgcccccaagggctgcgtcaccgccgtgatgggccccagcggcgccggcaagtcgacgctcctcgacgcgctcgccggccgcatcgccgcccgcctcggcggccgcgtcgcgctcgacggcgtggaggtgagccccggcctcgtcaagcgctgctccgcctacgtcatgcaggacgaccgcctcttccccatgctcaccgtccgcgagaccctcatgttcgccgccgacctccgcctcggcgcctccgtccccgccgccgacaagcgccgccgcgtcgacgccctcatcgaccagctcggcctcgcggcgtccgggaacacgtacatcggcgacgaggggacccggggcgtgtccggcggcgagcggcggcgtgtgtcgatcggcgtggacatcatccatggccccgcgctgctgttcctcgacgagccgacgtccggtctggactccacgagcgcgcacagcgtggtcgagaaggtgcgcgacatcgcctgcgccgggagcaccgtcgtgctcaccatccaccagccgtcgtcgcgcatcctgcagctgctcgaccacctcgtcattctcgcgcgtgggcagctcatgtacagcggcgcgccacgggaggtcgccgcccacctc</dnaseqindica>|
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| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001188160.1 RefSeq:Os07g0191600]|
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| − | }}
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| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
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| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 7]]
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| − | [[Category:Chromosome 7]]
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