Difference between revisions of "Os10g0573400"
Candyazhen (talk | contribs) (→Function) |
(→Labs working on this gene) |
||
| (43 intermediate revisions by 5 users not shown) | |||
| Line 1: | Line 1: | ||
| − | + | The rice '''''Os10g0573400''''' was reported as '''''OsPYL''''' in 2012 <ref name="ref1" /> by researchers from Korea. | |
==Annotated Information== | ==Annotated Information== | ||
| + | [[File:wz1.jpg|327px|thumb|right]] | ||
| + | ===Gene Symbol=== | ||
| + | *'''''Os02g0187800''''' '''''<=>''''' '''''OsPYL/RCAR10, OsPYL1, OsPYL10, PYL1, PYL10''''' | ||
| + | |||
===Function=== | ===Function=== | ||
| − | + | * '''''OsPYL''''' is a positive regulator of the ABA signal transduction pathway in seed germination and early seedling growth | |
| + | * Abscisic acid (ABA) is a phytohormone that positively regulates seed dormancy and stress tolerance.<ref name="ref1" /><ref name="ref2" /><ref name="ref3" /> | ||
| − | + | ===Phenotypic analysis=== | |
| − | + | * Transgenic rice plants expressing OsPYL/RCAR5, a PYL/RCAR orthologue of rice, were found to be hypersensitive to ABA during seed germination and early seedling growth. | |
| + | * Constitutive expression of OsPYL/RCAR5 increases expression of the ABA-responsive genes under ABA treatment | ||
===Expression=== | ===Expression=== | ||
| − | + | * This gene is related to the expression of ABA metabolism and its signaling pathways. | |
| + | * Proteins related to ABA signaling pathways may have a higher expression variation among different organs or stress responses in comparison with those of ABA metabolism. <ref name="ref2" /> | ||
===Evolution=== | ===Evolution=== | ||
| − | + | * It is the common ancestor of many species such as ''A. thaliana'', ''Arabidopsis lyrata'', ''Populustrichocarpa'', ''Oryza sativa'', ''Selaginella moellendorffii'', and ''Physcomitrella patens''. | |
| + | * Twelve ABA receptor orthologs named OsPYL1–12 in Oryza sativa (OsPYLs) are identified. OsPYL1 corresponds to Os10g0573400 which is showed in the following chaters. <ref name="ref3" /> | ||
| − | + | * Phylogenetic relationships in orthologous cluster 7 including ABA receptor genes. An orthologous cluster (OC) is defined to have genes diverged in each species from a gene in the common ancestor of these six species. <ref name="ref2" /> | |
==Labs working on this gene== | ==Labs working on this gene== | ||
| − | + | * Department of Bio-crop development, National Academy of Agricultural Science, Rural Development Administration, Suwon,441-707 Korea | |
| + | * Department of Biological Sciences, Sungkyunkwan University, Suwon, 440-746 Korea | ||
| + | * Department of Genetic Engineering, Sungkyunkwan University, Suwon, 440-746 Korea | ||
| + | * School of Biological Sciences (BK21 program), Chung-Ang University, Seoul, 156-756 Korea | ||
==References== | ==References== | ||
| − | |||
| − | = | + | <references> |
| − | + | <ref name="ref1"> | |
| − | + | Kim H, Hwang H, Hong JW, Lee YN, Ahn IP, Yoon IS, Yoo SD, Lee S, Lee SC, Kim | |
| − | + | BG. A rice orthologue of the ABA receptor, OsPYL/RCAR5, is a positive regulator | |
| − | + | of the ABA signal transduction pathway in seed germination and early seedling | |
| − | + | growth. J Exp Bot. 2012 Jan;63(2):1013-24. doi: 10.1093/jxb/err338. Epub 2011 Nov | |
| − | + | 9. PubMed PMID: 22071266.</ref> | |
| − | + | ||
| + | <ref name="ref2">He Y, Hao Q, Li W, et al. Identification and Characterization of ABA Receptors in Oryza sativa[J]. PloS one, 2014, 9(4): e95246.</ref> | ||
| + | |||
| + | <ref name="ref3">Hanada K, Hase T, Toyoda T, et al. Origin and evolution of genes related to ABA metabolism and its signaling pathways[J]. Journal of plant research, 2011, 124(4): 455-465.</ref> | ||
| + | </references> | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
[[Category:Genes]] | [[Category:Genes]] | ||
[[Category:Japonica mRNA]] | [[Category:Japonica mRNA]] | ||
| Line 60: | Line 51: | ||
[[Category:Japonica Chromosome 10]] | [[Category:Japonica Chromosome 10]] | ||
[[Category:Chromosome 10]] | [[Category:Chromosome 10]] | ||
| + | ==Structured Information== | ||
Latest revision as of 02:27, 7 May 2017
The rice Os10g0573400 was reported as OsPYL in 2012 [1] by researchers from Korea.
Contents
Annotated Information
Gene Symbol
- Os02g0187800 <=> OsPYL/RCAR10, OsPYL1, OsPYL10, PYL1, PYL10
Function
- OsPYL is a positive regulator of the ABA signal transduction pathway in seed germination and early seedling growth
- Abscisic acid (ABA) is a phytohormone that positively regulates seed dormancy and stress tolerance.[1][2][3]
Phenotypic analysis
- Transgenic rice plants expressing OsPYL/RCAR5, a PYL/RCAR orthologue of rice, were found to be hypersensitive to ABA during seed germination and early seedling growth.
- Constitutive expression of OsPYL/RCAR5 increases expression of the ABA-responsive genes under ABA treatment
Expression
- This gene is related to the expression of ABA metabolism and its signaling pathways.
- Proteins related to ABA signaling pathways may have a higher expression variation among different organs or stress responses in comparison with those of ABA metabolism. [2]
Evolution
- It is the common ancestor of many species such as A. thaliana, Arabidopsis lyrata, Populustrichocarpa, Oryza sativa, Selaginella moellendorffii, and Physcomitrella patens.
- Twelve ABA receptor orthologs named OsPYL1–12 in Oryza sativa (OsPYLs) are identified. OsPYL1 corresponds to Os10g0573400 which is showed in the following chaters. [3]
- Phylogenetic relationships in orthologous cluster 7 including ABA receptor genes. An orthologous cluster (OC) is defined to have genes diverged in each species from a gene in the common ancestor of these six species. [2]
Labs working on this gene
- Department of Bio-crop development, National Academy of Agricultural Science, Rural Development Administration, Suwon,441-707 Korea
- Department of Biological Sciences, Sungkyunkwan University, Suwon, 440-746 Korea
- Department of Genetic Engineering, Sungkyunkwan University, Suwon, 440-746 Korea
- School of Biological Sciences (BK21 program), Chung-Ang University, Seoul, 156-756 Korea
References
- ↑ 1.0 1.1 Kim H, Hwang H, Hong JW, Lee YN, Ahn IP, Yoon IS, Yoo SD, Lee S, Lee SC, Kim BG. A rice orthologue of the ABA receptor, OsPYL/RCAR5, is a positive regulator of the ABA signal transduction pathway in seed germination and early seedling growth. J Exp Bot. 2012 Jan;63(2):1013-24. doi: 10.1093/jxb/err338. Epub 2011 Nov 9. PubMed PMID: 22071266.
- ↑ 2.0 2.1 2.2 He Y, Hao Q, Li W, et al. Identification and Characterization of ABA Receptors in Oryza sativa[J]. PloS one, 2014, 9(4): e95246.
- ↑ 3.0 3.1 Hanada K, Hase T, Toyoda T, et al. Origin and evolution of genes related to ABA metabolism and its signaling pathways[J]. Journal of plant research, 2011, 124(4): 455-465.
