Difference between revisions of "Os10g0573400"
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| − | + | The rice '''''Os10g0573400''''' was reported as '''''OsPYL''''' in 2012 <ref name="ref1" /> by researchers from Korea. | |
==Annotated Information== | ==Annotated Information== | ||
| + | [[File:wz1.jpg|327px|thumb|right]] | ||
| + | ===Gene Symbol=== | ||
| + | *'''''Os02g0187800''''' '''''<=>''''' '''''OsPYL/RCAR10, OsPYL1, OsPYL10, PYL1, PYL10''''' | ||
| + | |||
===Function=== | ===Function=== | ||
| − | + | * '''''OsPYL''''' is a positive regulator of the ABA signal transduction pathway in seed germination and early seedling growth | |
| − | + | * Abscisic acid (ABA) is a phytohormone that positively regulates seed dormancy and stress tolerance.<ref name="ref1" /><ref name="ref2" /><ref name="ref3" /> | |
| − | Abscisic acid (ABA) is | ||
| + | ===Phenotypic analysis=== | ||
| + | * Transgenic rice plants expressing OsPYL/RCAR5, a PYL/RCAR orthologue of rice, were found to be hypersensitive to ABA during seed germination and early seedling growth. | ||
| + | * Constitutive expression of OsPYL/RCAR5 increases expression of the ABA-responsive genes under ABA treatment | ||
===Expression=== | ===Expression=== | ||
| − | + | * This gene is related to the expression of ABA metabolism and its signaling pathways. | |
| + | * Proteins related to ABA signaling pathways may have a higher expression variation among different organs or stress responses in comparison with those of ABA metabolism. <ref name="ref2" /> | ||
===Evolution=== | ===Evolution=== | ||
| − | + | * It is the common ancestor of many species such as ''A. thaliana'', ''Arabidopsis lyrata'', ''Populustrichocarpa'', ''Oryza sativa'', ''Selaginella moellendorffii'', and ''Physcomitrella patens''. | |
| − | + | * Twelve ABA receptor orthologs named OsPYL1–12 in Oryza sativa (OsPYLs) are identified. OsPYL1 corresponds to Os10g0573400 which is showed in the following chaters. <ref name="ref3" /> | |
| − | It is the common ancestor of many species such as ''A. thaliana'', ''Arabidopsis lyrata'', ''Populustrichocarpa'', ''Oryza sativa'', ''Selaginella moellendorffii'', and ''Physcomitrella patens''.Twelve ABA receptor orthologs named OsPYL1–12 in Oryza sativa (OsPYLs) are identified. OsPYL1 corresponds to Os10g0573400 which is showed in the following chaters. | ||
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| − | + | * Phylogenetic relationships in orthologous cluster 7 including ABA receptor genes. An orthologous cluster (OC) is defined to have genes diverged in each species from a gene in the common ancestor of these six species. <ref name="ref2" /> | |
==Labs working on this gene== | ==Labs working on this gene== | ||
| − | + | * Department of Bio-crop development, National Academy of Agricultural Science, Rural Development Administration, Suwon,441-707 Korea | |
| + | * Department of Biological Sciences, Sungkyunkwan University, Suwon, 440-746 Korea | ||
| + | * Department of Genetic Engineering, Sungkyunkwan University, Suwon, 440-746 Korea | ||
| + | * School of Biological Sciences (BK21 program), Chung-Ang University, Seoul, 156-756 Korea | ||
==References== | ==References== | ||
| − | |||
| − | + | <references> | |
| + | <ref name="ref1"> | ||
| + | Kim H, Hwang H, Hong JW, Lee YN, Ahn IP, Yoon IS, Yoo SD, Lee S, Lee SC, Kim | ||
| + | BG. A rice orthologue of the ABA receptor, OsPYL/RCAR5, is a positive regulator | ||
| + | of the ABA signal transduction pathway in seed germination and early seedling | ||
| + | growth. J Exp Bot. 2012 Jan;63(2):1013-24. doi: 10.1093/jxb/err338. Epub 2011 Nov | ||
| + | 9. PubMed PMID: 22071266.</ref> | ||
| − | He Y, Hao Q, Li W, et al. Identification and Characterization of ABA Receptors in Oryza sativa[J]. PloS one, 2014, 9(4): e95246. | + | <ref name="ref2">He Y, Hao Q, Li W, et al. Identification and Characterization of ABA Receptors in Oryza sativa[J]. PloS one, 2014, 9(4): e95246.</ref> |
| − | = | + | <ref name="ref3">Hanada K, Hase T, Toyoda T, et al. Origin and evolution of genes related to ABA metabolism and its signaling pathways[J]. Journal of plant research, 2011, 124(4): 455-465.</ref> |
| − | + | </references> | |
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[[Category:Genes]] | [[Category:Genes]] | ||
[[Category:Japonica mRNA]] | [[Category:Japonica mRNA]] | ||
| Line 72: | Line 51: | ||
[[Category:Japonica Chromosome 10]] | [[Category:Japonica Chromosome 10]] | ||
[[Category:Chromosome 10]] | [[Category:Chromosome 10]] | ||
| + | ==Structured Information== | ||
Latest revision as of 02:27, 7 May 2017
The rice Os10g0573400 was reported as OsPYL in 2012 [1] by researchers from Korea.
Contents
Annotated Information
Gene Symbol
- Os02g0187800 <=> OsPYL/RCAR10, OsPYL1, OsPYL10, PYL1, PYL10
Function
- OsPYL is a positive regulator of the ABA signal transduction pathway in seed germination and early seedling growth
- Abscisic acid (ABA) is a phytohormone that positively regulates seed dormancy and stress tolerance.[1][2][3]
Phenotypic analysis
- Transgenic rice plants expressing OsPYL/RCAR5, a PYL/RCAR orthologue of rice, were found to be hypersensitive to ABA during seed germination and early seedling growth.
- Constitutive expression of OsPYL/RCAR5 increases expression of the ABA-responsive genes under ABA treatment
Expression
- This gene is related to the expression of ABA metabolism and its signaling pathways.
- Proteins related to ABA signaling pathways may have a higher expression variation among different organs or stress responses in comparison with those of ABA metabolism. [2]
Evolution
- It is the common ancestor of many species such as A. thaliana, Arabidopsis lyrata, Populustrichocarpa, Oryza sativa, Selaginella moellendorffii, and Physcomitrella patens.
- Twelve ABA receptor orthologs named OsPYL1–12 in Oryza sativa (OsPYLs) are identified. OsPYL1 corresponds to Os10g0573400 which is showed in the following chaters. [3]
- Phylogenetic relationships in orthologous cluster 7 including ABA receptor genes. An orthologous cluster (OC) is defined to have genes diverged in each species from a gene in the common ancestor of these six species. [2]
Labs working on this gene
- Department of Bio-crop development, National Academy of Agricultural Science, Rural Development Administration, Suwon,441-707 Korea
- Department of Biological Sciences, Sungkyunkwan University, Suwon, 440-746 Korea
- Department of Genetic Engineering, Sungkyunkwan University, Suwon, 440-746 Korea
- School of Biological Sciences (BK21 program), Chung-Ang University, Seoul, 156-756 Korea
References
- ↑ 1.0 1.1 Kim H, Hwang H, Hong JW, Lee YN, Ahn IP, Yoon IS, Yoo SD, Lee S, Lee SC, Kim BG. A rice orthologue of the ABA receptor, OsPYL/RCAR5, is a positive regulator of the ABA signal transduction pathway in seed germination and early seedling growth. J Exp Bot. 2012 Jan;63(2):1013-24. doi: 10.1093/jxb/err338. Epub 2011 Nov 9. PubMed PMID: 22071266.
- ↑ 2.0 2.1 2.2 He Y, Hao Q, Li W, et al. Identification and Characterization of ABA Receptors in Oryza sativa[J]. PloS one, 2014, 9(4): e95246.
- ↑ 3.0 3.1 Hanada K, Hase T, Toyoda T, et al. Origin and evolution of genes related to ABA metabolism and its signaling pathways[J]. Journal of plant research, 2011, 124(4): 455-465.
