Difference between revisions of "Os10g0573400"
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==Annotated Information== | ==Annotated Information== | ||
| − | [[File:wz1.jpg| | + | [[File:wz1.jpg|327px|thumb|right]] |
===Gene Symbol=== | ===Gene Symbol=== | ||
*'''''Os02g0187800''''' '''''<=>''''' '''''OsPYL/RCAR10, OsPYL1, OsPYL10, PYL1, PYL10''''' | *'''''Os02g0187800''''' '''''<=>''''' '''''OsPYL/RCAR10, OsPYL1, OsPYL10, PYL1, PYL10''''' | ||
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===Expression=== | ===Expression=== | ||
* This gene is related to the expression of ABA metabolism and its signaling pathways. | * This gene is related to the expression of ABA metabolism and its signaling pathways. | ||
| − | * Proteins related to ABA signaling pathways may have a higher expression variation among different organs or stress responses in comparison with those of ABA metabolism. <ref name=" | + | * Proteins related to ABA signaling pathways may have a higher expression variation among different organs or stress responses in comparison with those of ABA metabolism. <ref name="ref2" /> |
===Evolution=== | ===Evolution=== | ||
* It is the common ancestor of many species such as ''A. thaliana'', ''Arabidopsis lyrata'', ''Populustrichocarpa'', ''Oryza sativa'', ''Selaginella moellendorffii'', and ''Physcomitrella patens''. | * It is the common ancestor of many species such as ''A. thaliana'', ''Arabidopsis lyrata'', ''Populustrichocarpa'', ''Oryza sativa'', ''Selaginella moellendorffii'', and ''Physcomitrella patens''. | ||
| − | * Twelve ABA receptor orthologs named OsPYL1–12 in Oryza sativa (OsPYLs) are identified. OsPYL1 corresponds to Os10g0573400 which is showed in the following chaters. <ref name=" | + | * Twelve ABA receptor orthologs named OsPYL1–12 in Oryza sativa (OsPYLs) are identified. OsPYL1 corresponds to Os10g0573400 which is showed in the following chaters. <ref name="ref3" /> |
| − | * Phylogenetic relationships in orthologous cluster 7 including ABA receptor genes. An orthologous cluster (OC) is defined to have genes diverged in each species from a gene in the common ancestor of these six species. <ref name=" | + | * Phylogenetic relationships in orthologous cluster 7 including ABA receptor genes. An orthologous cluster (OC) is defined to have genes diverged in each species from a gene in the common ancestor of these six species. <ref name="ref2" /> |
==Labs working on this gene== | ==Labs working on this gene== | ||
| − | * Department of Bio-crop development, National Academy of Agricultural Science, Rural Development Administration, Suwon, | + | * Department of Bio-crop development, National Academy of Agricultural Science, Rural Development Administration, Suwon,441-707 Korea |
| − | 441-707 Korea | ||
* Department of Biological Sciences, Sungkyunkwan University, Suwon, 440-746 Korea | * Department of Biological Sciences, Sungkyunkwan University, Suwon, 440-746 Korea | ||
* Department of Genetic Engineering, Sungkyunkwan University, Suwon, 440-746 Korea | * Department of Genetic Engineering, Sungkyunkwan University, Suwon, 440-746 Korea | ||
Latest revision as of 02:27, 7 May 2017
The rice Os10g0573400 was reported as OsPYL in 2012 [1] by researchers from Korea.
Contents
Annotated Information
Gene Symbol
- Os02g0187800 <=> OsPYL/RCAR10, OsPYL1, OsPYL10, PYL1, PYL10
Function
- OsPYL is a positive regulator of the ABA signal transduction pathway in seed germination and early seedling growth
- Abscisic acid (ABA) is a phytohormone that positively regulates seed dormancy and stress tolerance.[1][2][3]
Phenotypic analysis
- Transgenic rice plants expressing OsPYL/RCAR5, a PYL/RCAR orthologue of rice, were found to be hypersensitive to ABA during seed germination and early seedling growth.
- Constitutive expression of OsPYL/RCAR5 increases expression of the ABA-responsive genes under ABA treatment
Expression
- This gene is related to the expression of ABA metabolism and its signaling pathways.
- Proteins related to ABA signaling pathways may have a higher expression variation among different organs or stress responses in comparison with those of ABA metabolism. [2]
Evolution
- It is the common ancestor of many species such as A. thaliana, Arabidopsis lyrata, Populustrichocarpa, Oryza sativa, Selaginella moellendorffii, and Physcomitrella patens.
- Twelve ABA receptor orthologs named OsPYL1–12 in Oryza sativa (OsPYLs) are identified. OsPYL1 corresponds to Os10g0573400 which is showed in the following chaters. [3]
- Phylogenetic relationships in orthologous cluster 7 including ABA receptor genes. An orthologous cluster (OC) is defined to have genes diverged in each species from a gene in the common ancestor of these six species. [2]
Labs working on this gene
- Department of Bio-crop development, National Academy of Agricultural Science, Rural Development Administration, Suwon,441-707 Korea
- Department of Biological Sciences, Sungkyunkwan University, Suwon, 440-746 Korea
- Department of Genetic Engineering, Sungkyunkwan University, Suwon, 440-746 Korea
- School of Biological Sciences (BK21 program), Chung-Ang University, Seoul, 156-756 Korea
References
- ↑ 1.0 1.1 Kim H, Hwang H, Hong JW, Lee YN, Ahn IP, Yoon IS, Yoo SD, Lee S, Lee SC, Kim BG. A rice orthologue of the ABA receptor, OsPYL/RCAR5, is a positive regulator of the ABA signal transduction pathway in seed germination and early seedling growth. J Exp Bot. 2012 Jan;63(2):1013-24. doi: 10.1093/jxb/err338. Epub 2011 Nov 9. PubMed PMID: 22071266.
- ↑ 2.0 2.1 2.2 He Y, Hao Q, Li W, et al. Identification and Characterization of ABA Receptors in Oryza sativa[J]. PloS one, 2014, 9(4): e95246.
- ↑ 3.0 3.1 Hanada K, Hase T, Toyoda T, et al. Origin and evolution of genes related to ABA metabolism and its signaling pathways[J]. Journal of plant research, 2011, 124(4): 455-465.
