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| − | Please input one-sentence summary here.
| + | The rice '''''Os02g0739700''''' was reported as '''''DEL1''''' in 2017 <ref name="ref1" /> by researchers from China. |
| | | | |
| | ==Annotated Information== | | ==Annotated Information== |
| | + | ===Gene Symbol=== |
| | + | *'''''Os02g0187800''''' '''''<=>''''' '''''Orysa''''' '''''DEL1''''' |
| | ===Function=== | | ===Function=== |
| − | Please input function information here.
| + | |
| | + | *DEL1 is involved in both the maintenance of normal cell division and the induction of leaf senescence. |
| | | | |
| | ===Expression=== | | ===Expression=== |
| − | Please input expression information here.
| + | *DEL1 gene encode a pectate lyase (PEL) precursor that contains a PelC domain. |
| | + | *DEL1 is expressed in all tissues but predominantly in elongating tissues. |
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| | | | |
| − | ===Evolution===
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| − | Please input evolution information here.
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| | You can also add sub-section(s) at will. | | You can also add sub-section(s) at will. |
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| | ==Labs working on this gene== | | ==Labs working on this gene== |
| − | Please input related labs here.
| + | *State Key Lab for Rice Biology, China National Rice Research Institute, Hangzhou 310006, China |
| − | | + | *National Key Laboratory of Crop Genetic Improvement and National Centre of Plant Gene Research, Huazhong Agricultural University, Wuhan 430070, China |
| | + | *National Key Facility for Crop Gene Resources and Genetic Improvement, Instituteof Crop Science, Chinese Academy of Agricultural Sciences, Beijing 100081,China, |
| | + | *Institute of Microbiology, Chinese Academy of Sciences, State Key Laboratory of Plant Genomics, Beijing 100101, China |
| | ==References== | | ==References== |
| − | Please input cited references here.
| + | <references> |
| | + | * <ref name="ref1"> |
| | + | Leng Y, Yang Y, Ren D, Huang L, Dai L, Wang Y, Chen L, Tu Z, Gao Y, Li X, Zhu |
| | + | L, Hu J, Zhang G, Gao Z, Guo L, Kong Z, Lin Y, Qian Q, Zeng D. A rice PECTATE |
| | + | LYASE-LIKE gene is required for plant growth and leaf senescence. Plant Physiol. |
| | + | 2017 Apr 28. pii: pp.01625.2016. doi: 10.1104/pp.16.01625. [Epub ahead of print] |
| | + | PubMed PMID: 28455404. |
| | + | </ref> |
| | + | </references> |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 2]] |
| − | GeneName = Os02g0739700|
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| − | Description = Transcription factor E2F/dimerisation partner (TDP) family protein|
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| − | Version = NM_001054604.1 GI:115448578 GeneID:4330674|
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| − | Length = 3439 bp|
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| − | Definition = Oryza sativa Japonica Group Os02g0739700, complete gene.|
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| − | Source = Oryza sativa Japonica Group
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| − | | |
| − | ORGANISM Oryza sativa Japonica Group
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| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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| − | clade; Ehrhartoideae; Oryzeae; Oryza.
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| − | |
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| − | Chromosome = [[:category:Japonica Chromosome 2|Chromosome 2]]|
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| − | AP = Chromosome 2:31811337..31814775|
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| − | CDS = 31811552..31811673,31812416..31812827,31812917..31812978,31813083..31813155,31813248..31813315<br>,31813407..31813536,31813644..31813709,31814162..31814239,31814336..31814456<br>,31814544..31814737|
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| − | GCID = <gbrowseImage1>
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| − | name=NC_008395:31811337..31814775
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| − | source=RiceChromosome02
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| − | preset=GeneLocation
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| − | </gbrowseImage1>|
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| − | GSID = <gbrowseImage2>
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| − | name=NC_008395:31811337..31814775
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| − | source=RiceChromosome02
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| − | preset=GeneLocation
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| − | </gbrowseImage2>|
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| − | CDNA = <cdnaseq>atggcgacggcggcggtgatggctgctgtaccctcgtcttcgccggccgacgcggcggaggctgtggttatgacggaggcggtgccttctctcccgcaacgccagcagccggtgttcgtcgagggcagaggcgggaagctgcgtgaccacgcctacagccgcaagcagaagtcgctcggcctcctctgctccaatttcgtcgctctgtacaaccgcgacgacgtggagtctatcgggctggacgacgcggctaggaggctcggcgtggagaggcgccggatctacgacatcgtcaacgtgctcgagagcgtagggatcctcgtgaggaaggccaagaatcgttattcttggataggcttcggcggcgtcccaatggcattgcgagaactcaaggagagggcattgagagagaagtctggattggctcctctgcccgtggaggagccgtctgcagccattatgtcggatgacgaagatgaagataagatgggtgacgctgatggtgataccgagagcgagaagctgagtcaaccagttgacaacccttctgacaacaagccaggcgcacctcgctgccggcttagatctgaccataggaaggagaagtcgcttgggttgctcacgcagaatttcgtgaaactcttcctgaccatggaggttgacacaatctcacttgatgaagctgcaaagctgctacttggagaaggtcacgcagagaacagtatgagaactaaagtccggagactgtatgacattgctaacgtgctgtcatcactgaatttcattgataagatacaacaggcagactcaaggaaacctgcattccggtggttgggctcagcggggaaaccaaaagctgaaaatggtgtcacaatcgcagtacctccaccagggaagaccatatcgaacaagagagcatttgggactgaactcactaacattgacataaacagaagcagactggactcaacaatcccaaagaaagcaaagctgacactgagtggtggtgaaattttgaagaactgcaaattgtcagtgcagaaacagctcgggcagggtagcaagggtggttttgtttatgggcctttccaccctgctggtgcaagaaaacaagagcttgacaatggtaataaaggacacacagataatgttcaaaactgggagagccttgctgcttcatttcgaccacaataccagaaccaagcattgggcgatctttttgctcattatgtggaagcctggaaatcgtggtactctgaatttgcgcaaggcagcagcatgatgcagcagcactttggcatgcctgtcattaaccagtttttgtag</cdnaseq>|
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| − | AA = <aaseq>MATAAVMAAVPSSSPADAAEAVVMTEAVPSLPQRQQPVFVEGRG GKLRDHAYSRKQKSLGLLCSNFVALYNRDDVESIGLDDAARRLGVERRRIYDIVNVLE SVGILVRKAKNRYSWIGFGGVPMALRELKERALREKSGLAPLPVEEPSAAIMSDDEDE DKMGDADGDTESEKLSQPVDNPSDNKPGAPRCRLRSDHRKEKSLGLLTQNFVKLFLTM EVDTISLDEAAKLLLGEGHAENSMRTKVRRLYDIANVLSSLNFIDKIQQADSRKPAFR WLGSAGKPKAENGVTIAVPPPGKTISNKRAFGTELTNIDINRSRLDSTIPKKAKLTLS GGEILKNCKLSVQKQLGQGSKGGFVYGPFHPAGARKQELDNGNKGHTDNVQNWESLAA SFRPQYQNQALGDLFAHYVEAWKSWYSEFAQGSSMMQQHFGMPVINQFL</aaseq>|
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| − | DNA = <dnaseqindica>3103..3224#1949..2360#1798..1859#1621..1693#1461..1528#1240..1369#1067..1132#537..614#320..440#39..232#gcggacgcaccaagatccaatcctcgcgagcagaatcgatggcgacggcggcggtgatggctgctgtaccctcgtcttcgccggccgacgcggcggaggctgtggttatgacggaggcggtgccttctctcccgcaacgccagcagccggtgttcgtcgagggcagaggcgggaagctgcgtgaccacgcctacagccgcaagcagaagtcgctcggcctcctctgctccaagtggggatctctcgtgcatctgggggattcgtggattttggcgttttggttccctgttcttaccgaatttttttgtgcgttttctagtttcgtcgctctgtacaaccgcgacgacgtggagtctatcgggctggacgacgcggctaggaggctcggcgtggagaggcgccggatctacgacatcgtcaacgtgctcgagagcgtaggggtgagttccttcttcctccgcctttcctggacagggttcttgttctttcttgctcgatttgattctgacatttgttttcgattcatctgtgagaagatcctcgtgaggaaggccaagaatcgttattcttggataggcttcggcggcgtcccaatggcattgcgagaactcaaggtttgtgttgccattccatgtgataattctgcaagaaactgttggtctaatgcatctaaagcgtggaagaggattttgatccctcgaggggatatcctctcgttgtttgcatgtcactcaaatggttataaaaaaatttgaaaaaaattaagaagatgtattaatatatgatatatcactccacaaacatgcaagtaaaaattcaacttctacatctcgcaacgaaaaaaaaacaaatttgactctggatatacgttaactagctgcggttcaatttgttttttttcgttacgagatgtagaagttgaatttgaacttgtatgtttgtggagtgttatatcacatgttaatacacttttccaatttttttcaaatttttttataaccatttaagtgacatacaaacagtttacccctaaagcgtcttcttttcttcctcttggctttatcaggagagggcattgagagagaagtctggattggctcctctgcccgtggaggagccgtctgcagccattgtatgctatcttatctttatctttctcaagaacatttgaatcgagctatctgccagaatttattttttcaaccaaaattttcatttcttctattcggtgatgtgaagatgtcggatgacgaagatgaagataagatgggtgacgctgatggtgataccgagagcgagaagctgagtcaaccagttgacaacccttctgacaacaagccaggcgcacctcgctgccggcttagatctggtacggcttaatttttttagtgctagtttactgcctgtgctacagctacattttgttgtgtcaaactcagtattttggtttacatttgcagaccataggaaggagaagtcgcttgggttgctcacgcagaatttcgtgaaactcttcctgaccatggaggtaagcaattgctggcgtctttgattctgttgtaaatatcaaaatatgtaatgctcttggagtaattgttatgaaatgggatctcggagcaggttgacacaatctcacttgatgaagctgcaaagctgctacttggagaaggtcacgcagagaacagtatgagaagtcagtactgccatttcctatactgaattatgcaaccttttgtagtaatcctagtgaaagggggaaaaaagctaatacttttctttcttgtatttgtgatgcagctaaagtccggagactgtatgacattgctaacgtgctgtcatcactgaatttcattgataaggtggggttcatacatttacttataggatgtagttaaatgatgagttagaacctgtttcttaacacttgctattgaattatggcttccagatacaacaggcagactcaaggaaacctgcattccggtggttgggctcagcggggaaaccaaaagctgaaaatggtgtcacaatcgcagtacctccaccagggaagaccatatcgaacaagagagcatttgggactgaactcactaacattgacataaacagaagcagactggactcaacaatcccaaagaaagcaaagctgacactgagtggtggtgaaattttgaagaactgcaaattgtcagtgcagaaacagctcgggcagggtagcaagggtggttttgtttatgggcctttccaccctgctggtgcaagaaaacaagagcttgacaatggtaataaaggacacacagataatgttcaaaactgggagagccttgctgcttcatttcgaccacaataccagaaccaaggtgggttaaactcttctttgaccctttacaagaattccatgatcttattccatctcttagacaaaaaaaaggttattttgttcttatggaatatgacttgggtaggaaaaagcctgtctctggttctgtgaggagtactataacatgtttctaggcttctagctgaagttacagcccactttgttggcctgtctctaactgatattgatataccatgccactctgaagttacagcatcaagccttcagtggatctgtttcctaccagttgacatcttttttcaagtgatttaagttgaacatactgatagaaagtgaaacatgtggattgaaaaatcaaccatagaaaatgaatcttgcaaatgctttatatgctctatttgatttcatgaaagtttacatagtttctgtaatattggctggtagatttgagctatatcactggtgtttgttccctgagtttttgcttgtaactttgttagttttgatactagtttctagctgaaataaattgcatacacatatatcaataggatcttcagcctttgctatattttgtttcttggcttcacttaaatggtgcatgagttttttggactttggtgccaagttctttgtactaaaagtactaggataatctatgcagctagggaagtagagtactatatgacaattttactttggaaaccatgctgttataaattcaattgctcatgatttcttccacaattttctgaatgcagcattgggcgatctttttgctcattatgtggaagcctggaaatcgtggtactctgaatttgcgcaaggcagcagcatgatgcagcagcactttggcatgcctgtcattaaccagtttttgtagtcaaatcattaatctcaagcactgtatttcttaccgcgtgcttgggattttacctgtacaatttgtcaagaaaatgagggaacaaagacatgacctaggcctaggatccattgtatttactcaatgcaggaaatatccaggctattcagtccaaaagataaactcgcctcattgttaggcatgtaactgttaattcatctagctataagctttcc</dnaseqindica>|
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| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001054604.1 RefSeq:Os02g0739700]|
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| − | }}
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| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
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| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 2]]
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| − | [[Category:Chromosome 2]]
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