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| − | {{JaponicaGene|
| + | The rice '''''Os05g0251400''''' was reported as '''''OsBVF1''''' in 2017 <ref name="ref1" /> by researchers from China. |
| − | GeneName = Os05g0251400|
| |
| − | Description = Conserved hypothetical protein|
| |
| − | Version = NM_001061564.1 GI:115462858 GeneID:4338221|
| |
| − | Length = 4020 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os05g0251400, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| | | | |
| − | ORGANISM Oryza sativa Japonica Group
| + | ==Annotated Information== |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| + | ===Gene Symbol=== |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| + | *'''''Os05g0251400''''' '''''<=>''''' '''''OsBVF1,BVF1''''' |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| + | ===Function=== |
| − | |
| + | *OsBVF1 is a novel plant-conserved factor involved in meiotic recombination in rice, providing a new insight into understanding of meiotic progression regulation. |
| − | Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
| + | |
| − | AP = Chromosome 5:9199430..9203449|
| + | ===Phenotypic analysis=== |
| − | CDS = 9199438..9199613,9200985..9201033,9201123..9201431,9201814..9201862,9202175..9202269<br>,9202376..9202500,9203146..9203203|
| + | *The bvf1 male meiocytes were defective in formation of meiotic double strand break, thereby resulting in a failure of bivalent formation in diakinesis and unequal chromosome segregation in anaphase I. |
| − | GCID = <gbrowseImage1>
| + | |
| − | name=NC_008398:9199430..9203449
| + | ===Evolution=== |
| − | source=RiceChromosome05
| + | *The causal gene, OsBVF1, encodes a unique OmpH/coiled-coil motif-containing protein and its homologs are highly conserved in the plant kingdom and seem to be a single-copy gene in the majority of plant species |
| − | preset=GeneLocation
| + | |
| − | </gbrowseImage1>|
| + | You can also add sub-section(s) at will. |
| − | GSID = <gbrowseImage2>
| + | |
| − | name=NC_008398:9199430..9203449
| + | ==Labs working on this gene== |
| − | source=RiceChromosome05
| + | *State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, 510642 Guangzhou, China |
| − | preset=GeneLocation
| + | *Key Laboratory of Plant Functional Genomics and Biotechnology of Guangdong Provincial Higher Education Institutions, 510642 Guangzhou, China |
| − | </gbrowseImage2>| | + | *College of Life Sciences, South China Agricultural University, 510642 Guangzhou, China |
| − | CDNA = <cdnaseq>atggagagggctaccacctccggaggcggcggcggcggcagccagccgccgcggggggtagggctgccgttggtggaggtgcaggcggcggcggcgtcgctgcggcggtcggaggtgttctacgtcgtgaaggagctcctcggcttcgtcctctacatgcaccaccagatccccgcggtattgcagaatcttgaaaatgaatttgcaagtttaaaggaggaaatgacagagatggcattgccaccaggagaaatgaaaccatctgatcagagaaagtacaatacacggaaaagggaagtaagacggaggatcaagaagcaggagaagttaatgaatggcctctccagcgtattttctgctcttcagaaagcactcgatgaagttcctagcattgaaggagttctcctgatcctcggtggtagccttgtcaggcctctgtttgtctatgacattacaatttctcatggtagatttgatgctggaagtgccaatgagcgtggtgcaagcaaattagcgcagtccgtttctcgaaaggccattcgtgctcttatatcaagtggtgcagggagtttatcttatacaggccctaccaagctgtttgttctagtcagatgtccctgtacattgaacttaccactggacttcctgccgaaacgtgattttcgttacagcaaaaaggttgtacccctccagatgtgtataaaatgcaatatagcaggcatccaaatagataatcaacaaataacatcaattgttgatgcttcaagatgcacttcagaatctactatttctgaggttatctggttccagtgtaagcatacgataagaggcctaccttgcaaggcgtcattagaagagtga</cdnaseq>|
| + | *State Key Laboratory of Genetic Engineering, Institute of Plant Biology, School of Life Sciences, Fudan University, 200438 Shanghai, China |
| − | AA = <aaseq>MERATTSGGGGGGSQPPRGVGLPLVEVQAAAASLRRSEVFYVVK ELLGFVLYMHHQIPAVLQNLENEFASLKEEMTEMALPPGEMKPSDQRKYNTRKREVRR RIKKQEKLMNGLSSVFSALQKALDEVPSIEGVLLILGGSLVRPLFVYDITISHGRFDA GSANERGASKLAQSVSRKAIRALISSGAGSLSYTGPTKLFVLVRCPCTLNLPLDFLPK RDFRYSKKVVPLQMCIKCNIAGIQIDNQQITSIVDASRCTSESTISEVIWFQCKHTIR GLPCKASLEE</aaseq>|
| + | |
| − | DNA = <dnaseqindica>9..184#1556..1604#1694..2002#2385..2433#2746..2840#2947..3071#3717..3774#gcggaaggatggagagggctaccacctccggaggcggcggcggcggcagccagccgccgcggggggtagggctgccgttggtggaggtgcaggcggcggcggcgtcgctgcggcggtcggaggtgttctacgtcgtgaaggagctcctcggcttcgtcctctacatgcaccaccagatccccgcgtaatcccccctcgatccgctcccatcctatccccccgcccttctctctttcaatctctctccctctcccaaatgctggggaagtggtcggtatagggatggatttggtgggtctctatgtgagtttttagcatctaggttacagtctaaacaatttgttcgagttcgaatctaattttctagagcaattgaggtggtactgaacttcggatttggtcaccagattttgatgggttttgttctagcaaccttagtgcttgtggatctaattgggatacaagttgcattgcatcaatccatcaaataggcaatggcctgactgaatggctgttctgctgtagcagagttgagaattccattaattcaaaatggctctagaaatatgcgtggcgttctggaccatactgttggcaatgaattgggcaacttcatcgatgatgatttgaaggttcacttttgtaacaaattgcttgcatttcctttgcttcctgggagatgtttggtattgatatgtggccttaggttgtgcattctctgttagatgaatatgactgttgattgttatgttattataaactgttaatttgacgagatactttaatttaccttattgtagcgtgttatctactcctggtcctgattacatgtgttggtgcaggtgtggtgttcttgtgctttcgttcttatgttttatgcacataataaaatagacaaaaaaaaattctggaagaaatcaaagtgtgtgtatccgttcttgtagaaatttctgctgtacgacttttttcccccgcaaatatgccaaaaaacttgcatatatttgtattaagaagaataaatagtaagagaacaaagtagcaacaaatatacatacacacacagagcttcaaaagaacaaatggtcagagactttatgtatgactgtttagtttctgtgtatgttctgggctctggttcttcatttgcaatacctgagcacatactcatgaccaacctagtttgtccagtacaacagaataatgttgatgcattggtgtgacgctgttattctatgatgtagggctaattttctggggcttaagttaggcacacagcattgttgtgcattggtgcttgacttctaggatgcgtacatcactgaagatgaaacctttgaagatgaaatctcctgctattgtgttgtttaaatttgttatagcacacctgcactgcaatcaaagaaaaagaatataagtgaacagcatttagcttggattatgtaattatccattttgcagatggccagattatatactaagttagggcagttatacactgctgtatgtaaaattatcacatgaatttgaagtctaatttgtttttctacattttcagggtattgcagaatcttgaaaatgaatttgcaagtttaaaggaggaaatggtaagttttgttctcagaaagaatgtcaccattagcatctacgcagtatttctttatcgagcctattaataatttgtggctatttatagacagagatggcattgccaccaggagaaatgaaaccatctgatcagagaaagtacaatacacggaaaagggaagtaagacggaggatcaagaagcaggagaagttaatgaatggcctctccagcgtattttctgctcttcagaaagcactcgatgaagttcctagcattgaaggagttctcctgatcctcggtggtagccttgtcaggcctctgtttgtctatgacattacaatttctcatggtagatttgatgctggaagtgccaatgagcgtggtgcaagcaaattagcgcagtccgtttctcgaaaggtgagctactttctggcttaatgctccatgaataactatcacccattagatcctagggtgactacatttctttagaatttggtagtttttctgaagtaccatagagttgagatctgaacgttgatggaattcacaatgctgtaacttttagtacctactttggacaacaatatggcaatagcatatctgaaatgttctagtgttgtagttttgctctactgtttggcattttggcatatgaccaaacagtgtaaggagaatcttgctatgtttttgccccattgctaggcttaattctatttttttttacttatcattgtgcatgtttcatcttcatatggtggtcctctttaaataataacatgcatatgtatatgtataggccattcgtgctcttatatcaagtggtgcagggagtttatcttatacaggtactggttcttctgttttactatatactagctctgttccaaaatataagaatttttagtggtggacatgggtattaaggaagtaggtggaattaaatgggagaaggttgtgattgtttgagaagtgaaaatatgtgaagaaattaaatgtggggagattgtgattagttgataagagaatgtaagtagagaagttgtattttgggacaaaatttgaatgctgaaattgttatattttgggacagtgggggtatttgattgggaatgccatcatccttttaccttaacgttttccctccaattgttttgaaggccctaccaagctgtttgttctagtcagatgtccctgtacattgaacttaccactggacttcctgccgaaacgtgattttcgttacagcaaaaaggttttttttttttctgaagttagtttatgttttttgtcagcttccttttgcaaaaagatctaatgtctccctgattaatacatgagccttaatcttttcaacacaggttgtacccctccagatgtgtataaaatgcaatatagcaggcatccaaatagataatcaacaaataacatcaattgttgatgcttcaagatgcacttcagaatctactatttctgaggttatctggtaaataattctggtcatctgttcccagttacccatttatcactatttgctttctgctgctatttcccctcctgtgtaatggtaaccaatagttcagtattgtcttaagtacggcaaaccttccctagtactatgcaagatagagtgctcttcctgagtccatgccactttattttcttaaaatcaaggcaggagcactgctgaattctactagaagaggtgaaattatgattacaagaagcccattagtgtaatcttattaaactgcatatgaatcttttgtgttttgaaggataaaagaaatttaatttaccaacatttgaattatgtgcttttgtgttttgttggcatcaagtattgcaaagaattattttaaggttgatacggttaggattttttctcagaaatcttacccattttagtttgttatgtgtacactggtttccttctattttttcccctgaaaaacatgtatgtgttttgatgacccctgttctgtttttagacctttgaacttccccctttttcagtctattaggcagagctcctgccattttcgttaaaaaaagaaaagagtgatctccagcggatcttttcttttgaacttaagtaaattcagttaacgaatattcattaattttccaggttccagtgtaagcatacgataagaggcctaccttgcaaggcgtcattagaagagtgatatggcccaagcatgttgaagacgcccagaaaacagtggatgatgtagcgatataactcctgttctgactttgtaaatgcatacggcattccgcgaaggatcatcattctgtatgttcgttccatttgtacagtgctatgaagttcagttcgctccattgcctaacaaagaagaatgaaaaacaagagcacaattaaagtttagtgaacctgaagtattgaattgaatctccacaccattttactt</dnaseqindica>|
| + | ==References== |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001061564.1 RefSeq:Os05g0251400]|
| + | <references> |
| − | }}
| + | * <ref name="ref1"> |
| − | [[Category:Genes]] | + | Zhou L, Han J, Chen Y, Wang Y, Liu YG. Bivalent Formation 1, a plant-conserved gene, encodes an OmpH/coiled-coil motif-containing protein required for meiotic recombination in rice. J Exp Bot. 2017 Mar 24. doi: 10.1093/jxb/erx077. [Epubahead of print] PubMed PMID: 28369589. |
| − | [[Category:Japonica mRNA]]
| + | </ref> |
| − | [[Category:Oryza Sativa Japonica Group]] | + | </references> |
| − | [[Category:Japonica Genes]]
| + | |
| − | [[Category:Japonica Chromosome 5]] | + | ==Structured Information== |
| − | [[Category:Chromosome 5]]
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]] |
