Difference between revisions of "Os03g0831200"

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(Created page with "{{JaponicaGene| GeneName = Os03g0831200| Description = Similar to GATA transcription factor 19| Version = NM_001058327.1 GI:115456382 GeneID:4334668| Length = 1331 bp| De...")
 
(Gene Symbol)
 
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{{JaponicaGene|
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The rice '''''Os03g0831200''''' was reported as '''''OsGATA12 ''''' in 2017 <ref name="ref1" /> by researchers from Canada.
GeneName = Os03g0831200|
 
Description = Similar to GATA transcription factor 19|
 
Version = NM_001058327.1 GI:115456382 GeneID:4334668|
 
Length = 1331 bp|
 
Definition = Oryza sativa Japonica Group Os03g0831200, complete gene.|
 
Source = Oryza sativa Japonica Group
 
  
  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Gene Symbol===
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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*'''''Os03g0831200''''' '''''<=>''''' '''''OsGATA12''''' '''''OsGATA12'''''
            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Function===
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
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*The down-regulation of the STAY GREEN RICE gene and in  vivo repression of its promoter by OsGATA12, which suggests a transcriptional repression function for a GATA transcription factor for prolonging the onset of senescence in cereals.
AP = Chromosome 3:35764245..35765575|
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CDS = 35764541..35764564,35764663..35764776,35764897..35765169|
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===Phenotypic analysis===
GCID = <gbrowseImage1>
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*OsGATA12, whose overexpression causes increased leaf greenness, reduction of leaf and tiller number, and affects yield parameters.
name=NC_008396:35764245..35765575
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source=RiceChromosome03
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preset=GeneLocation
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You can also add sub-section(s) at will.
</gbrowseImage1>|
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GSID = <gbrowseImage2>
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==Labs working on this gene==
name=NC_008396:35764245..35765575
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*Department of Molecular and Cellular Biology, University of Guelph, 50 Stone Road E., Guelph, ON N1G 2W1, Canada
source=RiceChromosome03
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preset=GeneLocation
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==References==
</gbrowseImage2>|
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<references>
CDNA = <cdnaseq>atggattcctcgtcggtcgagaaggggagtgggtcgatagatccggacgagcgcacggcctccggcgagcccaaggcgtgcaccgactgccacaccaccaagactccgctctggcgcggcggcccctccggccccaagtcgctgtgcaacgcgtgcgggatccggtaccggaagaagagacgggaggcgctggggctcgacgccggcgagggcggcgcggagcggcaggagaagaagaagagcaagagggagagaggggaggaggtgaccatggagctccgcatggtggggttcgggaaggaggtggtcctgaagcagcggcggcggatgcggcggaggagacgcctcggcgaggaggagaaggcggccatcctcctcatggccctctcctccggagtcatctacgcctga</cdnaseq>|
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* <ref name="ref1">
AA = <aaseq>MDSSSVEKGSGSIDPDERTASGEPKACTDCHTTKTPLWRGGPSG                    PKSLCNACGIRYRKKRREALGLDAGEGGAERQEKKKSKRERGEEVTMELRMVGFGKEV                    VLKQRRRMRRRRRLGEEEKAAILLMALSSGVIYA</aaseq>|
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Lu G, Casaretto JA, Ying S, Mahmood K, Liu F, Bi YM, Rothstein SJ. Overexpression of OsGATA12 regulates chlorophyll content, delays plant senescence and improves rice yield under high density planting. Plant Mol Biol. 2017 May;94(1-2):215-227. doi: 10.1007/s11103-017-0604-x. Epub 2017 Mar 24. PubMed PMID: 28342018.
DNA = <dnaseqindica>297..320#419..532#653..925#accaccaccattccctcttcttctcctcctccttgcttctcccgccccttaacccctactgctccctcccagtagccggtgctaaccctagcttgctagctagattgctctctctggtagtagtagatccgtggagtggagatctgcccgcggatcgagcggcggcggcagagcaccagccgtgtctgcggcgcggtgtgcgcgggtgttgcggagcggcggctgagcggaggtgtgggaggagggggagtgctgcggcttccggggtgttagatccgccgatcctggcgccggagatggattcctcgtcggtcgagaaggtgaagcttccgatccgtgggttcttggggggctcgatctgtggctggaatggcgccttggctgggtggttttttgacgctcgatctgtgggttgcaggggagtgggtcgatagatccggacgagcgcacggcctccggcgagcccaaggcgtgcaccgactgccacaccaccaagactccgctctggcgcggcggcccctccggccccaaggtgagatgagatccgatctgctcctcctgctcttccctttctcgatctgtgcatttttttcgcctgggttttcggtggttgatccgcccgatctgtgtttttttttttgctttgatccagtcgctgtgcaacgcgtgcgggatccggtaccggaagaagagacgggaggcgctggggctcgacgccggcgagggcggcgcggagcggcaggagaagaagaagagcaagagggagagaggggaggaggtgaccatggagctccgcatggtggggttcgggaaggaggtggtcctgaagcagcggcggcggatgcggcggaggagacgcctcggcgaggaggagaaggcggccatcctcctcatggccctctcctccggagtcatctacgcctgaaccaccaccctacctacctacccacctagcaacagcaagagagagagaagcagaggaaaggaggcagccatgggaaagagtgatttgcttgcttaacatgcatgatctcaaccgggagagactagacagatctctacccttttttttcttctcccctgcttagtttttccagctaattagttcgatcaaagtggaagccaagttaataatgatgatgatgatgtagtagctgctgttcttcctgttactgttacttgttcttgcctagctgtaatgttactagtagtgtttttagtagagcgtgtaacgttgcaatgtaagaaagagcttatgatccatcttctttctcttgttctttgcaagagattagctcctggatctgcaccaagtaatgcagtttttcagc</dnaseqindica>|
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</ref>
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001058327.1 RefSeq:Os03g0831200]|
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</references>
}}
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[[Category:Genes]]
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==Structured Information==
[[Category:Japonica mRNA]]
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 3]]
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 3]]
 
[[Category:Chromosome 3]]
 

Latest revision as of 02:56, 22 May 2017

The rice Os03g0831200 was reported as OsGATA12 in 2017 [1] by researchers from Canada.

Annotated Information

Gene Symbol

  • Os03g0831200 <=> OsGATA12 OsGATA12

Function

  • The down-regulation of the STAY GREEN RICE gene and in  vivo repression of its promoter by OsGATA12, which suggests a transcriptional repression function for a GATA transcription factor for prolonging the onset of senescence in cereals.

Phenotypic analysis

  • OsGATA12, whose overexpression causes increased leaf greenness, reduction of leaf and tiller number, and affects yield parameters.


You can also add sub-section(s) at will.

Labs working on this gene

  • Department of Molecular and Cellular Biology, University of Guelph, 50 Stone Road E., Guelph, ON N1G 2W1, Canada

References

  1. Lu G, Casaretto JA, Ying S, Mahmood K, Liu F, Bi YM, Rothstein SJ. Overexpression of OsGATA12 regulates chlorophyll content, delays plant senescence and improves rice yield under high density planting. Plant Mol Biol. 2017 May;94(1-2):215-227. doi: 10.1007/s11103-017-0604-x. Epub 2017 Mar 24. PubMed PMID: 28342018.

Structured Information