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| − | Please input one-sentence summary here.
| + | The rice '''''Os01g0612700''''' was reported as '''''OsLOL5''''' in 2016 <ref name="ref1" /> by researchers from China. |
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| | | | |
| | ==Annotated Information== | | ==Annotated Information== |
| | + | ===Gene Symbol=== |
| | + | *'''''Os01g0612700''''' '''''<=>''''' '''''LOL5''''' '''''OsLOL2''''' '''''OsLOL5''''' '''''OsLSD5''''' |
| | + | |
| | ===Function=== | | ===Function=== |
| − | Please input function information here.
| + | *'''OsLOL2''' is involved in rice growth and disease resistance. |
| − | | + | *The '''OsLOL2''' gene is predicted to encode a polypeptide of 163 amino acids with two LSD1-like zinc Wnger domains with 74.5% identity to those of LSD1. |
| | + | <br> |
| | ===Expression=== | | ===Expression=== |
| − | Please input expression information here.
| + | *Expression of '''OsLOL2''' were more resistant to rice bacterial blight, while antisense transgenic lines were less resistant to rice bacterial blight. |
| − | | + | <br> |
| − | ===Evolution===
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| − | Please input evolution information here.
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| − | | |
| − | You can also add sub-section(s) at will.
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| | ==Labs working on this gene== | | ==Labs working on this gene== |
| − | Please input related labs here.
| + | *State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100080, People’s Republic of China |
| − | | + | *Graduate School of Chinese Academy of Sciences,Beijing 100039, People’s Republic of China |
| | + | <br> |
| | ==References== | | ==References== |
| − | Please input cited references here.
| + | <references> |
| | + | <ref name="ref1"> |
| | + | Guan QJ, Ma HY, Wang ZJ, Wang ZY, Bu QY, Liu SK. A rice LSD1-like-type ZFP gene OsLOL5 enhances saline-alkaline tolerance in transgenic Arabidopsis thaliana, yeast and rice. BMC Genomics. 2016 Feb 27;17:142. doi:10.1186/s12864-016-2460-5. PubMed PMID: 26920613; PubMed Central PMCID:PMC4769587. |
| | + | </ref> |
| | + | </references> |
| | + | <br> |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]] |
| − | GeneName = Os01g0612700|
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| − | Description = Zinc finger, LSD1-type domain containing protein|
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| − | Version = NM_001050093.1 GI:115438513 GeneID:4325320|
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| − | Length = 5211 bp|
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| − | Definition = Oryza sativa Japonica Group Os01g0612700, complete gene.|
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| − | Source = Oryza sativa Japonica Group
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| − | | |
| − | ORGANISM Oryza sativa Japonica Group
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| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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| − | clade; Ehrhartoideae; Oryzeae; Oryza.
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| − | |
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| − | Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
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| − | AP = Chromosome 1:25951136..25956346|
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| − | CDS = 25951207..25953481,25954472..25954579,25955068..25955177,25955943..25956017|
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| − | GCID = <gbrowseImage1>
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| − | name=NC_008394:25951136..25956346
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| − | source=RiceChromosome01
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| − | preset=GeneLocation
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| − | </gbrowseImage1>|
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| − | GSID = <gbrowseImage2>
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| − | name=NC_008394:25951136..25956346
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| − | source=RiceChromosome01
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| − | preset=GeneLocation
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| − | </gbrowseImage2>|
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| − | CDNA = <cdnaseq>atgcaagaacaagctgctggttcagcgcttgccatgttggtaacttacggggagactgatacctcagcagtcagtgtatctccagtactggagagtggggagccagatgcagcccagattgatgtagtagcagggatgcaagaagaagctcctggttcaatgttggccatggaggtaacgtacagggaggttgatgctgcaacagtcagtgtgtctccggtattggagagtgtggagccagatgcagccaagatcgatgtagtagcaaggatgcaagaagaagctcctggttcaaagcttgccatggaggtaatgtacggggagactggtaccgcagcagtcagtgtgcctctggtattggagagtagggaagaggggtcacttcaagaatcaatgcagagaccatcttctcccacaatgaacattgagcaagagtcaatgcagagaccattttctcccacaattggcactgagacaagttcgccagagatggctcctgctggatctgagaactgtaaagtatcatggttgccgttgccccctcctacaccacttggcgaatcaatgccctccttgccagtcgcagctgcccccaaggttttattggtgatgccggaggaagcggttgagtcagtcccttcatcggaagctctggatgttgaaaaacctgcctccatcacacaggctgagcccagctcacctaatacgccaccgccaggatttgagaattttaagtcgtcatggttgccgctacccacgactcctcccccagttgaaaccactgatgtcttgccagatgtggtggttaccaaggcagtggaagcacccattgaggaagtgtctaggccattgccagctttggaggtgacaaacatggagtcagacactgtcctcagtatcttgcccacaacagtcttgccaacagaagggactgagggactactgcaacaaccactattgagacccccttctccagtggtgcaatctgaaccatgtttgcaaaatgagatggcacctccagggttcgagaattttaagtcatcatctgaaccatgttcagcagaggagatagcacctccagggtccgataatttcaaatcatcatctgaaccatgtttaccagaggagatggcacctccagggtttgaaaattttaagtcatcatctgaaccatgttcacaagaggagatggcacctccagggtttgagaattttaagtcatcatggccaccacttcccactctgccccaaactgtaccagatgcagccgcagcggatgctttggcagcaacagtggaagaagcagctgggccaccacctgcattggagttggaggcaatggatgtggacatggatgccatacatccaccaccgctgccttttgacagtggagtggagtcattgcaaaagccactgccaagagcaccttctcccataatgcaagaagcgccctgttcaccagatagggcaccgccagggtttgaaacctataagtcatcacagttactgctaccatctccatctctggcacaaaccacaaatgtgcgacaagatcaatcggtaactgaacctgtgtctgtgatagaggaagcccctcagctactgcactcagtggaggtaatgggtgtacatatggatgcagtacctccattgctaccatcatctgaaagtggagcagatgggctatctccgcagcaattcgcgcaacctcctcctgcagaaaaggatacaacaacctgtttgccagatatggtgcattcaggatgtgacaattcagagccctctcagcttctgtcactgcctgctgttatttctccagttcagaccccagatggcttggctgatgttcctgccattgacagggttgcagtggcattggaagaatcgcctcagcgaccgcttgtatcaggggaaatggaagctggcacagtgcccattcggtcatcaccactgaagaatatttctgaggggtcactgccacaactagaatcagagtcacattctcctacatcacaggctgcagatagcttactagatgcatctgactcaaagtctgtggctgtggcctcagaggagatgtctcagctaccacttgcatcgcaggcaactactacagaccttgtcagtacaactgcaatgcagccacaatctgagggtatagtggatgagtcattgcagcctcagcatccaccctcttctaccgcacatgattcaccttgtttacaggactctgtgccattggtgccaccaccaccttccccttacctaaataaagaagtaggtcaaatggtatgtggaagctgccgtattcttcttgcttattttagaggtgctggttatgttcactgtacttgttgccagacaatgaactatgtattggaagctcatgaagttggtaaggtgcattgtggacactgtgcgacattattgatgtatccttttggtgcgcctgctgttaagtgctcgttgtgcctctttgtcactgaaattggagagcggaatgttcgccgtcggttatcaatcgagcaacccacaagaactaactcatcagggctagctgaagcctga</cdnaseq>|
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| − | AA = <aaseq>MQEQAAGSALAMLVTYGETDTSAVSVSPVLESGEPDAAQIDVVA GMQEEAPGSMLAMEVTYREVDAATVSVSPVLESVEPDAAKIDVVARMQEEAPGSKLAM EVMYGETGTAAVSVPLVLESREEGSLQESMQRPSSPTMNIEQESMQRPFSPTIGTETS SPEMAPAGSENCKVSWLPLPPPTPLGESMPSLPVAAAPKVLLVMPEEAVESVPSSEAL DVEKPASITQAEPSSPNTPPPGFENFKSSWLPLPTTPPPVETTDVLPDVVVTKAVEAP IEEVSRPLPALEVTNMESDTVLSILPTTVLPTEGTEGLLQQPLLRPPSPVVQSEPCLQ NEMAPPGFENFKSSSEPCSAEEIAPPGSDNFKSSSEPCLPEEMAPPGFENFKSSSEPC SQEEMAPPGFENFKSSWPPLPTLPQTVPDAAAADALAATVEEAAGPPPALELEAMDVD MDAIHPPPLPFDSGVESLQKPLPRAPSPIMQEAPCSPDRAPPGFETYKSSQLLLPSPS LAQTTNVRQDQSVTEPVSVIEEAPQLLHSVEVMGVHMDAVPPLLPSSESGADGLSPQQ FAQPPPAEKDTTTCLPDMVHSGCDNSEPSQLLSLPAVISPVQTPDGLADVPAIDRVAV ALEESPQRPLVSGEMEAGTVPIRSSPLKNISEGSLPQLESESHSPTSQAADSLLDASD SKSVAVASEEMSQLPLASQATTTDLVSTTAMQPQSEGIVDESLQPQHPPSSTAHDSPC LQDSVPLVPPPPSPYLNKEVGQMVCGSCRILLAYFRGAGYVHCTCCQTMNYVLEAHEV GKVHCGHCATLLMYPFGAPAVKCSLCLFVTEIGERNVRRRLSIEQPTRTNSSGLAEA</aaseq>|
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| − | DNA = <dnaseqindica>72..2346#3337..3444#3933..4042#4808..4882#cagcagccagtgtgtctccagtattggacagtggggatccagatgcagctgaggttgatgtagtagtagggatgcaagaacaagctgctggttcagcgcttgccatgttggtaacttacggggagactgatacctcagcagtcagtgtatctccagtactggagagtggggagccagatgcagcccagattgatgtagtagcagggatgcaagaagaagctcctggttcaatgttggccatggaggtaacgtacagggaggttgatgctgcaacagtcagtgtgtctccggtattggagagtgtggagccagatgcagccaagatcgatgtagtagcaaggatgcaagaagaagctcctggttcaaagcttgccatggaggtaatgtacggggagactggtaccgcagcagtcagtgtgcctctggtattggagagtagggaagaggggtcacttcaagaatcaatgcagagaccatcttctcccacaatgaacattgagcaagagtcaatgcagagaccattttctcccacaattggcactgagacaagttcgccagagatggctcctgctggatctgagaactgtaaagtatcatggttgccgttgccccctcctacaccacttggcgaatcaatgccctccttgccagtcgcagctgcccccaaggttttattggtgatgccggaggaagcggttgagtcagtcccttcatcggaagctctggatgttgaaaaacctgcctccatcacacaggctgagcccagctcacctaatacgccaccgccaggatttgagaattttaagtcgtcatggttgccgctacccacgactcctcccccagttgaaaccactgatgtcttgccagatgtggtggttaccaaggcagtggaagcacccattgaggaagtgtctaggccattgccagctttggaggtgacaaacatggagtcagacactgtcctcagtatcttgcccacaacagtcttgccaacagaagggactgagggactactgcaacaaccactattgagacccccttctccagtggtgcaatctgaaccatgtttgcaaaatgagatggcacctccagggttcgagaattttaagtcatcatctgaaccatgttcagcagaggagatagcacctccagggtccgataatttcaaatcatcatctgaaccatgtttaccagaggagatggcacctccagggtttgaaaattttaagtcatcatctgaaccatgttcacaagaggagatggcacctccagggtttgagaattttaagtcatcatggccaccacttcccactctgccccaaactgtaccagatgcagccgcagcggatgctttggcagcaacagtggaagaagcagctgggccaccacctgcattggagttggaggcaatggatgtggacatggatgccatacatccaccaccgctgccttttgacagtggagtggagtcattgcaaaagccactgccaagagcaccttctcccataatgcaagaagcgccctgttcaccagatagggcaccgccagggtttgaaacctataagtcatcacagttactgctaccatctccatctctggcacaaaccacaaatgtgcgacaagatcaatcggtaactgaacctgtgtctgtgatagaggaagcccctcagctactgcactcagtggaggtaatgggtgtacatatggatgcagtacctccattgctaccatcatctgaaagtggagcagatgggctatctccgcagcaattcgcgcaacctcctcctgcagaaaaggatacaacaacctgtttgccagatatggtgcattcaggatgtgacaattcagagccctctcagcttctgtcactgcctgctgttatttctccagttcagaccccagatggcttggctgatgttcctgccattgacagggttgcagtggcattggaagaatcgcctcagcgaccgcttgtatcaggggaaatggaagctggcacagtgcccattcggtcatcaccactgaagaatatttctgaggggtcactgccacaactagaatcagagtcacattctcctacatcacaggctgcagatagcttactagatgcatctgactcaaagtctgtggctgtggcctcagaggagatgtctcagctaccacttgcatcgcaggcaactactacagaccttgtcagtacaactgcaatgcagccacaatctgagggtatagtggatgagtcattgcagcctcagcatccaccctcttctaccgcacatgattcaccttgtttacaggactctgtgccattggtgccaccaccaccttccccttacctaaataaaggttagtatattgcatctcacttcctctaattccatgtctatataactgctattgtttgtgttgacttagtatttgtgatgagtttgggggtctttggaaggtgaaaatgagtcagtgtgagattggatcaaacaccatgcagaggctctgagatgaccaagtttctcaggaaggtctatttcattgataccctgacttgagtacataggacgtccacgtacatggctcactaagctaaagaaacatcttatcctaaatatgattctcttaccactaacaggaaacacatttctatcttatctattctaacctcttaacttggcttccttgatgttcaaggacaactggacaacctggccagccttgcgtgctcatgctactgggtcgtgtttggagttctacgaacagttttctttccattgattaatcatgtaccaatcatatgcccatcttagactatataagtttcctataatttgtgaaaaaagttggcttgttttttgtgattctcagtctttgatatgattttgaaagaagaatgctcatgcaaactgtggctagcagatataaatttaatgaactagttgcgggaatcagcattaagtccttaaagtttaccaagcatgtaatgtgctttcattcattcaaaaaagcatgtaatatgctcacttatatctccattgatcccctatttgtgtatacctggtccctcttaagacagtttcagccaaaatgatgaagtttgattgcaattgtgaaatatagtactaacttttttttagagcaatagatgaaaggaatatactatgcttctgtgtaccttctctttggatgttatccaatccctcaatatcaattcatacatagttgtgaaccaaagaagtcagcttttcacccataaataaatctggggctagtatataagtaatccggtgtaattctctctctctctctctgagcataagtaacctctgttgctaacttgtacagaagtaggtcaaatggtatgtggaagctgccgtattcttcttgcttattttagaggtgctggttatgttcactgtacttgttgccagacaatgaactatgtattggaaggtgcgtactatttctcatttgcccaacagtgttttacttttgttatgccccatataatttttattttgtctttcaacacctatagatatcagccatcttgtatcttacttctgtggaaatacttactgaatactgaacatgctttttctcaaaaatttgccttctgctactgtctaaattatgtgtaagaagtatggttggttacatatttcaacattggaccactcaatagagaactggagaattttgcccttgcctttataatactatttgttcatgcacaccctctaaagctttttcatgcaacacttctgcaaaatatggatgccatttgcgcaaaatttatctcgtctttgtctttccttttgaagcacggctgtccttaatatttccatgtattatagcttttaccaaatactgatgtaccgatgtgtgtatatatgcatcttcttacccttgcatgggttttccccctatgtttgttgcagctcatgaagttggtaaggtgcattgtggacactgtgcgacattattgatgtatccttttggtgcgcctgctgttaagtgctcgttgtgcctctttgtcactgaaattggagtaagtgaactatggcttgtgataaatttacttgctatatgtgcttatttgtgataaatatgttgaaaaagaaggtaatgctacattgaaaaaaagagagagagaactgattatgtactgtgcatgttggtcgagttggtttactttctaatgaatatgactgccttagattctagatttcccatgcatccggttggctatatgagctaaatcactaatcctgacaggcattatttgctatgtaagcatgttgtactgagacctattgtttatcaaatattaaggtgatactacataaacttcaatatttgctctaaaaggctagaaatccccatattaatcagatagagggagggaggttaaccagatagatatatggtagatggaaaggagggatctgaagtctgaagcatgttctgagcatgactcaatatgctcctttaataaaatgtcgtggctcaggtgcttcatatataatagacatggtttgctttatctgaatcccagtcaacacatgaagcttttatcttcctccttgtctcagataatcatgccgtgcactatgatagatctgaagcactacgaactgtctttgactgtgactccactttgatgccttcagctttggttgcctgcaatcctttgctgttcccacgctttcattcagtagatttcttgatacttagactgtcgttgcagtgcataattgttcagctatttgccaatacattgatctccttcaattctttgttccttttgttccaggagcggaatgttcgccgtcggttatcaatcgagcaacccacaagaactaactcatcagggctagctgaagcctgatcagttctggtcccatgtacccatcggattccaagaaagcttcaaatgctaatgtggatgaaaggaacagaatgttcgcccttcgtcatgaggtgtgggcatgaaagttcaagatggtatggacaagccaaagtgtacaaagatagcgttttttttttcattgatgtagacaggaaaggtgaccttgttagtacgactagatctcctttgaaagggaaaataaaagaaaaatagttcgattcaatctggaggtgatatgcgtatgtcatatgaatgataacagagtagttttcagatggttctttcgcggtgaccatcatgttgccccc</dnaseqindica>|
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| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001050093.1 RefSeq:Os01g0612700]|
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| − | }}
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| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
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| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 1]]
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| − | [[Category:Chromosome 1]]
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