Difference between revisions of "Os01g0914400"

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(Created page with "{{JaponicaGene| GeneName = Os01g0914400| Description = Conserved hypothetical protein| Version = NM_001051715.1 GI:115441800 GeneID:4324345| Length = 1237 bp| Definition ...")
 
 
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{{JaponicaGene|
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The rice '''''Os01g0914400''''' was reported as '''''EPFL9''''' in 2017 <ref name="ref1" /> by researchers from UK and USA.  
GeneName = Os01g0914400|
 
Description = Conserved hypothetical protein|
 
Version = NM_001051715.1 GI:115441800 GeneID:4324345|
 
Length = 1237 bp|
 
Definition = Oryza sativa Japonica Group Os01g0914400, complete gene.|
 
Source = Oryza sativa Japonica Group
 
  
  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Gene Symbol===
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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*'''''Os01g0914400''''' '''''<=>''''' '''''EPFL9'''''
            clade; Ehrhartoideae; Oryzeae; Oryza.
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===Function===
|
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*gene EPFL9 (Epidermal Patterning Factor like-9, a positive regulator of stomatal development in Arabidopsis) orthologue in rice.  
Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
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AP = Chromosome 1:41601238..41602474|
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CDS = 41601304..41601418,41601543..41601616,41602031..41602213|
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GCID = <gbrowseImage1>
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You can also add sub-section(s) at will.
name=NC_008394:41601238..41602474
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source=RiceChromosome01
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==Labs working on this gene==
preset=GeneLocation
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*International Rice Research Institute, DAPO, 7777 Metro Manila, Philippines
</gbrowseImage1>|
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*Department of Molecular Biology and Biotechnology, University of Shefeld, Shefeld S10 2TN, UK
GSID = <gbrowseImage2>
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*Department of Biology, University of North Carolinaat Chapel Hill, Chapel Hill, NC, USA
name=NC_008394:41601238..41602474
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*Departamento de Biologıá Molecular de Plantas, Instituto deBiotecnologıá, Universidad Nacional Autónoma de Mexico Cuernavaca, Cuernavaca, Mexico
source=RiceChromosome01
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*Department of Animal and Plant Sciences, University of Shefeld, Shefeld S10 2TN, UK
preset=GeneLocation
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</gbrowseImage2>|
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==References==
CDNA = <cdnaseq>atggccaatgcttgccccacatctaccacaagctccttgcccctcttcttcctcttctgtttcctgctcttcagtcatgctcgttgcaatcaagggcaccatggcagcatctcaggtacagactatggagaacaatatcctcaccaaacattacctgaagaacatatacatttgcaggagaacatcaaggttctaaacaaggagaggctgcccaaatatgcaaggagaatgttgattggttcgactgctccaatatgcacatacaacgagtgcagagggtgtcgattcaagtgtactgccgagcaggtcccagtggatgcaaatgaccccatgaatagtgcttaccactacaaatgtgtttgccacaggtga</cdnaseq>|
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<references>
AA = <aaseq>MANACPTSTTSSLPLFFLFCFLLFSHARCNQGHHGSISGTDYGE                    QYPHQTLPEEHIHLQENIKVLNKERLPKYARRMLIGSTAPICTYNECRGCRFKCTAEQ                    VPVDANDPMNSAYHYKCVCHR</aaseq>|
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* <ref name="ref1">
DNA = <dnaseqindica>67..181#306..379#794..976#gttgcttctctaatccaggcacaccaccatcctcccattctctatccatttgtttgaagaagggttatggccaatgcttgccccacatctaccacaagctccttgcccctcttcttcctcttctgtttcctgctcttcagtcatgctcgttgcaatcaagggcaccatggcagcatctcaggtacccctttgcatcagattgatatcttgtcttttcttctgttctcctgcatctattaactgtgatttaggttgacatgataaaacctatgtatttaaatgtttcaatttcatatgatgtcaaggtacagactatggagaacaatatcctcaccaaacattacctgaagaacatatacatttgcaggagaacatcaaggtacatatgccatcttgctattacaaagtatgtaattaattgagttttgtgtttttctgttcctcaagtatgttttcttaaaactttagttttatgttttattatgttcattatatatgtcaaggaaaaaagctttcccccaactgtcagcttccttggcgcataccatatagttctggatggacttttcagtaggaagaaatggttgcatctatcaactgtgcactgcttggcatcttttgctaggatgagaaaatgattggtagcaacttgcctcccatcttttctcctaaagtagtatgaaaagacttaagaacaagaccaaacaaacatgaatgccaaagttaaatcagaaagtatgtaaatatctggaagatactatggttaagatgatcttcaaatgtatgccattaggttctaaacaaggagaggctgcccaaatatgcaaggagaatgttgattggttcgactgctccaatatgcacatacaacgagtgcagagggtgtcgattcaagtgtactgccgagcaggtcccagtggatgcaaatgaccccatgaatagtgcttaccactacaaatgtgtttgccacaggtgatcattaataattaagaggagcttctgttatgagtagtagtttgcatccattttattctctttttcccccttctacccttctaggctcaaaaggttcattttttccccttttgttttaacaagtggccagctagtagaggattagagggcattttgtattttaagatgttcaggttgtggactggtaattttggaagtaaatgttaaaaaatttgaaaaacagcttatttatactattgtgcagacaaaatgttccttgctt</dnaseqindica>|
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Yin X, Biswal AK, Dionora J, Perdigon KM, Balahadia CP, Mazumdar S, Chater C, Lin HC, Coe RA, Kretzschmar T, Gray JE, Quick PW, Bandyopadhyay A. CRISPR-Cas9 and CRISPR-Cpf1 mediated targeting of a stomatal developmental gene EPFL9 in rice. Plant Cell Rep. 2017 May;36(5):745-757. doi: 10.1007/s00299-017-2118-z. Epub 2017 Mar 27. PubMed PMID: 28349358.
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001051715.1 RefSeq:Os01g0914400]|
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</ref>
}}
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</references>
[[Category:Genes]]
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[[Category:Japonica mRNA]]
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==Structured Information==
[[Category:Oryza Sativa Japonica Group]]
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]]
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 1]]
 
[[Category:Chromosome 1]]
 

Latest revision as of 03:09, 22 May 2017

The rice Os01g0914400 was reported as EPFL9 in 2017 [1] by researchers from UK and USA.

Annotated Information

Gene Symbol

  • Os01g0914400 <=> EPFL9

Function

  • gene EPFL9 (Epidermal Patterning Factor like-9, a positive regulator of stomatal development in Arabidopsis) orthologue in rice.


You can also add sub-section(s) at will.

Labs working on this gene

  • International Rice Research Institute, DAPO, 7777 Metro Manila, Philippines
  • Department of Molecular Biology and Biotechnology, University of Shefeld, Shefeld S10 2TN, UK
  • Department of Biology, University of North Carolinaat Chapel Hill, Chapel Hill, NC, USA
  • Departamento de Biologıá Molecular de Plantas, Instituto deBiotecnologıá, Universidad Nacional Autónoma de Mexico Cuernavaca, Cuernavaca, Mexico
  • Department of Animal and Plant Sciences, University of Shefeld, Shefeld S10 2TN, UK

References

  1. Yin X, Biswal AK, Dionora J, Perdigon KM, Balahadia CP, Mazumdar S, Chater C, Lin HC, Coe RA, Kretzschmar T, Gray JE, Quick PW, Bandyopadhyay A. CRISPR-Cas9 and CRISPR-Cpf1 mediated targeting of a stomatal developmental gene EPFL9 in rice. Plant Cell Rep. 2017 May;36(5):745-757. doi: 10.1007/s00299-017-2118-z. Epub 2017 Mar 27. PubMed PMID: 28349358.

Structured Information