Difference between revisions of "Os05g0204600"

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Please input one-sentence summary here.
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The rice '''''Os05g0204600''''' was reported as '''''OsBBX14''''' in 2016 <ref name="ref1" /> by researchers from China.
  
 
==Annotated Information==
 
==Annotated Information==
 +
===Gene Symbol===
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*'''''Os05g0204600''''' '''''<=>''''' '''''OsBBX14''''' '''''BBX14'''''
 
===Function===
 
===Function===
Please input function information here.
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*'''''OsBBX14''''' regulates heading date differently under LD and SD conditions.
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===Phenotypic analysis===
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*'''''OsBBX14'''''-overexpression (OsBBX14-OX) lines exhibited delayed heading date under long-day (LD) and short-day (SD) conditions, whereas RNAi lines of OsBBX14 lines had similar heading dates to the WT.
  
 
===Expression===
 
===Expression===
Please input expression information here.
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*'''''OsBBX14''''' is highly expressed in flag leaf blades.
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*'''''OsBBX14''''' expression shows a diurnal rhythm under photoperiodic conditions and subsequent continuous white light.
  
===Evolution===
 
Please input evolution information here.
 
  
 
You can also add sub-section(s) at will.
 
You can also add sub-section(s) at will.
  
 
==Labs working on this gene==
 
==Labs working on this gene==
Please input related labs here.
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*Shandong Rice Research Institute, Shandong Academy of Agricultural Sciences, Jinan 250100, PR China
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*College of Life Science, Shandong Normal University, Jinan 250014, PR China
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*Institute of Genetics and Developmental Biology, the Chinese Academy of Sciences, Beijing 100190, PR China
  
 
==References==
 
==References==
Please input cited references here.
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<references>
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* <ref name="ref1">
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Bai B, Zhao J, Li Y, Zhang F, Zhou J, Chen F, Xie X. OsBBX14 delays heading date by repressing florigen gene expression under long and short-day conditions in rice. Plant Sci. 2016 Jun;247:25-34. doi: 10.1016/j.plantsci.2016.02.017. Epub 2016 Feb 27. PubMed PMID: 27095397.
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</ref>
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</references>
  
 
==Structured Information==
 
==Structured Information==
{{JaponicaGene|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]]
GeneName = Os05g0204600|
 
Description = Zinc finger, B-box domain containing protein|
 
Version = NM_001061426.1 GI:115462582 GeneID:4338069|
 
Length = 2535 bp|
 
Definition = Oryza sativa Japonica Group Os05g0204600, complete gene.|
 
Source = Oryza sativa Japonica Group
 
 
 
  ORGANISM  Oryza sativa Japonica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
 
AP = Chromosome 5:6496805..6499339|
 
CDS = 6496929..6497261,6497339..6497854,6498255..6498542|
 
GCID = <gbrowseImage1>
 
name=NC_008398:6496805..6499339
 
source=RiceChromosome05
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=NC_008398:6496805..6499339
 
source=RiceChromosome05
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>atgtcgcctcctcctccaccatattaccaccacctcctcctcctccgctcctcgcccaccaccactggaggaggagctcgggttcttgccgcggcggagctcgcacgcatgaagctactgtgcagcgcgtgcgaggcggcggaggccagcgtcctctgctgcgccgacgaggccgccctgtgcgcgcgctgcgaccgcgacatccacgccgccaaccgcctcgccgggaagcacctccgcctccctctcctctcccccgcctcctcctcctcctcctccgccgccgccctcgcgccgccgccgccgtcgccgcccaagtgcgacatatgccaggagagccacgcgtacttcttctgcctcgaggaccgcgcgctgctgtgccggagctgcgacgtggcggtgcacacggccaacgccttcgtctccgcgcaccgccgtttcctcctcaccggcgtgcaggtcgggcaggagcaggacgagcactcccctgacccgcctgagccgtctcctcctccgccgccgccgccgcctgcatccaagagcgaccacccggcgccgctctacggcgagggcggaggagggttcagctgggacgccgccgactcgccggccgcgggcggcctccccgactggtcggccgtcgtcgaccagttcggctccccgccgccgccgcgccacacggacaccgcgaccgtgacgaccccgccgccgaccaagaggagcccacgcgcgccggcgttcggcggccagggcggcatgatggattggcccctcggcgagttcttcggcggcttcaccgacttcaccggcggctttggcttcggcttcggcgacagtggcacctccaaggctgacagcgggaagctgggagggagcacggacggctcgccgtactaccggtcgtcatcggaagatgaccggaacgccgacgagctcttcgggcaggtaccagagatccagtggtcggtgccggagctcccctcgccgccgacggcctccggcctccactggcaacgccatccagccgccactcacggcggcggcggcggcggacccgacaccaccgccttcgtccccgacatctgctcccccgacagctgcttcccggccaccacctccaaacgccggaggcaataa</cdnaseq>|
 
AA = <aaseq>MSPPPPPYYHHLLLLRSSPTTTGGGARVLAAAELARMKLLCSAC                    EAAEASVLCCADEAALCARCDRDIHAANRLAGKHLRLPLLSPASSSSSSAAALAPPPP                    SPPKCDICQESHAYFFCLEDRALLCRSCDVAVHTANAFVSAHRRFLLTGVQVGQEQDE                    HSPDPPEPSPPPPPPPPASKSDHPAPLYGEGGGGFSWDAADSPAAGGLPDWSAVVDQF                    GSPPPPRHTDTATVTTPPPTKRSPRAPAFGGQGGMMDWPLGEFFGGFTDFTGGFGFGF                    GDSGTSKADSGKLGGSTDGSPYYRSSSEDDRNADELFGQVPEIQWSVPELPSPPTASG                    LHWQRHPAATHGGGGGGPDTTAFVPDICSPDSCFPATTSKRRRQ</aaseq>|
 
DNA = <dnaseqindica>125..457#535..1050#1451..1738#caaaaaaaaacaatttgtgcggccattaggcgttgagacctcggcgaatggcagccggcgacgtcgtcccacctccaccgcgcccacgaatccattccattccattctccatcgccccccacccatgtcgcctcctcctccaccatattaccaccacctcctcctcctccgctcctcgcccaccaccactggaggaggagctcgggttcttgccgcggcggagctcgcacgcatgaagctactgtgcagcgcgtgcgaggcggcggaggccagcgtcctctgctgcgccgacgaggccgccctgtgcgcgcgctgcgaccgcgacatccacgccgccaaccgcctcgccgggaagcacctccgcctccctctcctctcccccgcctcctcctcctcctcctccgccgccgccctcgcgccgccgccgccgtcgccgcccaagtgcgacatatgccaggtaggtgttcgatcggtggtgcttgtttgttcttgttggatcttggattgggctgatcggtgattgctcgtcttcaggagagccacgcgtacttcttctgcctcgaggaccgcgcgctgctgtgccggagctgcgacgtggcggtgcacacggccaacgccttcgtctccgcgcaccgccgtttcctcctcaccggcgtgcaggtcgggcaggagcaggacgagcactcccctgacccgcctgagccgtctcctcctccgccgccgccgccgcctgcatccaagagcgaccacccggcgccgctctacggcgagggcggaggagggttcagctgggacgccgccgactcgccggccgcgggcggcctccccgactggtcggccgtcgtcgaccagttcggctccccgccgccgccgcgccacacggacaccgcgaccgtgacgaccccgccgccgaccaagaggagcccacgcgcgccggcgttcggcggccagggcggcatgatggattggcccctcggcgagttcttcggcggcttcaccgacttcaccggcggctttggcttcggcttcggcgacagtggcacctccaaggtcactactcctttctcctcgtcgccgcttcaaatttcgctgaatttccccacatttcaaactcaattcgatcgatttcttccacgcattgcaatcaccaccactaatcggcacaatatatacaacttcttttctaaaaaaaataaagaattactagatacaatttctatttccaaattttggccggatacaattttctttttgaaattctcgcaatatatactatttaaactcagaagatgcatacaccattgtacacgtaacatcacaattacacctcaacctttatgaatacatcgtctaatattatactataagatacggaaactagtgatatatcctgatcttggtaaaatcctattgaaataaaattttgtcgtgtcattgatggatggaccaggctgacagcgggaagctgggagggagcacggacggctcgccgtactaccggtcgtcatcggaagatgaccggaacgccgacgagctcttcgggcaggtaccagagatccagtggtcggtgccggagctcccctcgccgccgacggcctccggcctccactggcaacgccatccagccgccactcacggcggcggcggcggcggacccgacaccaccgccttcgtccccgacatctgctcccccgacagctgcttcccggccaccacctccaaacgccggaggcaataatgctagctagctaatagctatgtccagaggttgaagacgacgacgacgacgacgaccagccatgtgagtgtgactgcgattgctaatagctcgagacgctgacgtgatcgtgtgtggtaccacctttcatggcgatggcgccaactacaatgttaggtaggagaagctttctactcgtctggtggttggttggttggttgttgacgatgatgatctgttgccatttccggcgacatcgaggcggaaacagatctctctgattttgagtgcctgacatatgggtttcatgtctaatgggttcttatattagcgacccacattagcagtattgtagagaagacttgttgaaaacagccgcaatcagcattggctgacaaatacagttgggggagatcgatggaactacagtgtacagtctatgctctgcagcatctgattctgatcctgaagtctggaaagaggaagaagaagattagaaagaagagaggcctctgctttttcgatggccgaaactgagatgcacctcgctaattggtgggcagtggacaggataggataggggccatgtgatggattgatggtgatgctctactttgttcagaacagaagtctctgaattttggttggatcacagaaacttgtaaaagattcttgcatgtgtacagaagttttatactacagtagttagatagaaacatggatggatccgtgagaaaagaaaaatgctggtaatgttgtattgtactagtaaaagaaaatgttatatgtttttaactcggctgattcattctttttcg</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001061426.1 RefSeq:Os05g0204600]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 5]]
 
[[Category:Chromosome 5]]
 

Latest revision as of 03:27, 2 June 2017

The rice Os05g0204600 was reported as OsBBX14 in 2016 [1] by researchers from China.

Annotated Information

Gene Symbol

  • Os05g0204600 <=> OsBBX14 BBX14

Function

  • OsBBX14 regulates heading date differently under LD and SD conditions.

Phenotypic analysis

  • OsBBX14-overexpression (OsBBX14-OX) lines exhibited delayed heading date under long-day (LD) and short-day (SD) conditions, whereas RNAi lines of OsBBX14 lines had similar heading dates to the WT.

Expression

  • OsBBX14 is highly expressed in flag leaf blades.
  • OsBBX14 expression shows a diurnal rhythm under photoperiodic conditions and subsequent continuous white light.


You can also add sub-section(s) at will.

Labs working on this gene

  • Shandong Rice Research Institute, Shandong Academy of Agricultural Sciences, Jinan 250100, PR China
  • College of Life Science, Shandong Normal University, Jinan 250014, PR China
  • Institute of Genetics and Developmental Biology, the Chinese Academy of Sciences, Beijing 100190, PR China

References

  1. Bai B, Zhao J, Li Y, Zhang F, Zhou J, Chen F, Xie X. OsBBX14 delays heading date by repressing florigen gene expression under long and short-day conditions in rice. Plant Sci. 2016 Jun;247:25-34. doi: 10.1016/j.plantsci.2016.02.017. Epub 2016 Feb 27. PubMed PMID: 27095397.

Structured Information