Difference between revisions of "Os10g0463800"

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(Created page with "{{JaponicaGene| GeneName = Os10g0463800| Description = Conserved hypothetical protein| Version = NM_001071324.1 GI:115482391 GeneID:4348829| Length = 3343 bp| Definition ...")
 
 
(2 intermediate revisions by 2 users not shown)
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{{JaponicaGene|
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The rice '''''Os10g0463800''''' was reported as '''''FLO7''''' in 2015 <ref name="ref1" /> by researchers from China.  
GeneName = Os10g0463800|
 
Description = Conserved hypothetical protein|
 
Version = NM_001071324.1 GI:115482391 GeneID:4348829|
 
Length = 3343 bp|
 
Definition = Oryza sativa Japonica Group Os10g0463800, complete gene.|
 
Source = Oryza sativa Japonica Group
 
  
  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Gene Symbol===
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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*'''''Os10g0463800''''' '''''<=>''''' '''''FLO7'''''
            clade; Ehrhartoideae; Oryzeae; Oryza.
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===Function===
|
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*'''''FLO7''''' as a unique plant regulator required for starch synthesis and amyloplast development within the peripheral endosperm and provide new insights into the spatial regulation of endosperm development in rice.
Chromosome = [[:category:Japonica Chromosome 10|Chromosome 10]]|
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AP = Chromosome 10:17569220..17572562|
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===Phenotypic analysis===
CDS = 17569386..17569484,17569623..17569777,17570133..17570296,17570494..17570615,17570920..17571132<br>,17571252..17571401,17572287..17572478|
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*Consistent with the phenotypic alternation in '''''flo7''''' endosperm, the '''''flo7''''' mutant had reduced amylose content and seriously disrupted amylopectin structure only in the peripheral endosperm.
GCID = <gbrowseImage1>
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name=NC_008403:17569220..17572562
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===Expression===
source=RiceChromosome10
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*'''''FLO7''''' gene was expressed ubiquitously but exhibited a specific expression in the endosperm periphery.
preset=GeneLocation
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</gbrowseImage1>|
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You can also add sub-section(s) at will.
GSID = <gbrowseImage2>
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name=NC_008403:17569220..17572562
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==Labs working on this gene==
source=RiceChromosome10
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*State Key Laboratory for Crop Genetics and Germplasm Enhancement, Jiangsu Plant Gene Engineering Research Center, Nanjing Agricultural University, Nanjing 210095, PR China
preset=GeneLocation
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*National Key Facility for Crop Resources and Genetic Improvement, Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing 100081, PR China
</gbrowseImage2>|
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*College of Life Sciences, Nanjing Agricultural University, Nanjing 210095, PR China
CDNA = <cdnaseq>atggccgtggcccttgccggcgcgagatccccaggagcgggcgcgatcctcagcctccgccgcctcgcccccgccgccgcggcgcccgtacgtctgggcggaagcggaaccccaggcacccggcgccgccgcggcatcgccatggcggcagctgcgtccgccccgcccgcgcccgccgatgccctccccaagggtgctgattcatttttccggacagttatctcaaacatggagaaagtatatctgagcagaaatccaactgccaaaaccatcctggaacttgttcgttcttatgatggggaccacatttgctatgatcattttgctttcagaacatttggagttgatggttatggtataaaatcacttgctgaattttttactgactttggttatgtccctcgtgaagaactaaggtttccagcaaaaaagttaagagcactatggttttctcctcccaccaatgatggatacactggaactggtgtttatgggcctttgccaaggatattcatttcagaactacttgtggatgagttgagtcctcagagccaggacatcattcaaaaatacattagaacttctggtaaaggaaataaacatgcaactcttgcaagtacatcaggggagctgacatgggagaagcccatttattctgatttccaagttttatctagggaaagtgaatatgctgcatggactcttgttaatggctatgcactaaatcataccacaatttccactcatcgcttgatatcagatattagaagtatcaataagttcaacaaatttgtggaggacaatgggttcaagttaaattcagaaggagggattttgaaagtgagtcctgatggtctcctccagcaaagctcaactgtagctgattcagcgttgtttacttttgctgatggaatcactgaatccattccacgttcctatattgaatttgctgaacgcctggtactcccacagttcaaagatttgccaaatgatgaggtcaacgaacaccacaggcgcgatggttttgaggtagggaatgcggacaaaatatttgagagcacatcaaatgatcagcttacacggagatctgcataa</cdnaseq>|
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AA = <aaseq>MAVALAGARSPGAGAILSLRRLAPAAAAPVRLGGSGTPGTRRRR                    GIAMAAAASAPPAPADALPKGADSFFRTVISNMEKVYLSRNPTAKTILELVRSYDGDH                    ICYDHFAFRTFGVDGYGIKSLAEFFTDFGYVPREELRFPAKKLRALWFSPPTNDGYTG                    TGVYGPLPRIFISELLVDELSPQSQDIIQKYIRTSGKGNKHATLASTSGELTWEKPIY                    SDFQVLSRESEYAAWTLVNGYALNHTTISTHRLISDIRSINKFNKFVEDNGFKLNSEG                    GILKVSPDGLLQQSSTVADSALFTFADGITESIPRSYIEFAERLVLPQFKDLPNDEVN                    EHHRRDGFEVGNADKIFESTSNDQLTRRSA</aaseq>|
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==References==
DNA = <dnaseqindica>3079..3177#2786..2940#2267..2430#1948..2069#1431..1643#1162..1311#85..276#agtggtagtaggctaggctatatccgcctcggccaccgccgggttcgcctccagtgctcgccgcctccgccgccgccggtgtccatggccgtggcccttgccggcgcgagatccccaggagcgggcgcgatcctcagcctccgccgcctcgcccccgccgccgcggcgcccgtacgtctgggcggaagcggaaccccaggcacccggcgccgccgcggcatcgccatggcggcagctgcgtccgccccgcccgcgcccgccgatgccctccccaaggtaacgcacgcaccgccgcgcgccccacgccgccaccggcaggccgtgtatatctgtgatcgagttagtagtacgatcgaggttggtgcatttctagcgtttgcttttgctcgagctgtccccgtagagcgtgtggcggtggtgcggtttgcctagaactgcaaggggtttctgtttggaggttggattggatgcattctctgctgctgtatggggacgctggtgtgggggcgccgctgtgtaggttgacatgttttggctggtgctctgaagtctcagactctgaattagcgcaacctcgcatgcattgttgctactgatttgttactaatatatttactataatattattgttatgtcttgtaccttaatccttaagtcaacatcatgggaaagtgttgattagaggccctcggtcctggagttattgaaagaaagagatttttgagccactattctagaatttaggacagaccattatacagctttttttttctttaataaggtttgtttaattagaacgtgcttgttcttttgatgttgttacagatggaggatccttgtagtgtgctaaaaatctgaactgtccttgtcagctacattgttagtattgttctgcaggcatggtttgttcatattaatgttttacatgatgtttaaaatggatattaggcctggcatgcaaaattttgatggtaattatgttaaatcgaatgccaatgatcaaccatttctttttcccatatgtagtagtattagatattatatgcttggattatactttgccgtgttcttctttcttttctgtatgattactgaatgttcacagttccaatttccaagggaatgaggtgggctaatgtcttaaattttattccgtttcagggtgctgattcatttttccggacagttatctcaaacatggagaaagtatatctgagcagaaatccaactgccaaaaccatcctggaacttgttcgttcttatgatggggaccacatttgctatgatcattttgctttcagaacatttggagtgagtattagatttacattcagcttaaattgttgattcatcatgtgttattacttaagatgaaactgtgcagtgttgatctgcaaaaacatgtgatattttatctttgataaatgcaggttgatggttatggtataaaatcacttgctgaattttttactgactttggttatgtccctcgtgaagaactaaggtttccagcaaaaaagttaagagcactatggttttctcctcccaccaatgatggatacactggaactggtgtttatgggcctttgccaaggatattcatttcagaactacttgtggatgagttgagtcctcagagccaggtaccactataaactattgtgcatgagtgcatctgggattgtcattgaactttatgttgtttctgtcagactataagtctggtggcttcaatacagatttctatagtgcaaatactatagccacataatctagtttggaaaccaggtcttaaatttgaacagtccatgcatcagatagagtatatggatgctggatttctggtctctgatattggttgccactagagtcgcttatttccacctttgctcattcgaagatatcttctgttctcaaacccatttatgtggttgtttttctgcgcaggacatcattcaaaaatacattagaacttctggtaaaggaaataaacatgcaactcttgcaagtacatcaggggagctgacatgggagaagcccatttattctgatttccaagttttatctaggtacttgttatagtaccttgagtttttttactgaactttacaccgtttaacaaataaccgtttattaatccagtaatactttaaattgcctttttgtgctcatcctgagtggcatccctgagtatgctatttgcagttctgtactcctgtttctttgttcaaataacatttgctctttcttttcttttggacaccagggaaagtgaatatgctgcatggactcttgttaatggctatgcactaaatcataccacaatttccactcatcgcttgatatcagatattagaagtatcaataagttcaacaaatttgtggaggacaatgggttcaagttaaattcagaaggagggattttgaaaggtctgttcctaagttctgatcactcagattgtattcaataagtagtggctccctctatatgcatagtataacgctctcaatgaattacctcctcttatacccagctggttctactggaaaaatccaattacattttattaggagaactacacctaattgcacattttacagactttgcttttagaaactatgtagcttgttgatagtagtcaggatgattaattgttagctttggttcaaaatttccttttatgtacatagtatcaagcatatttgttttccttgctgttattccacatttgcagagaagttattttgcatacttgtttttctcatttcttctaccttttaacagtgagtcctgatggtctcctccagcaaagctcaactgtagctgattcagcgttgtttacttttgctgatggaatcactgaatccattccacgttcctatattgaatttgctgaacgcctggtactcccacagttcaaagatttgccaaatgatgaggtgtgcatattttattcttactgtatttattttgcttagcatgagtggggtttcgataaacttatcagtttatcttcctgaaccctaaattcctgatcgactaaccaagcaaccatacttgtttaataactactgaaggtcaacgaacaccacaggcgcgatggttttgaggtagggaatgcggacaaaatatttgagagcacatcaaatgatcagcttacacggagatctgcataaacgttgaagtctcaactattctggaagcgagtcatgcctcttggaagcgtattgaaggagtgttctctgtgataactgtatctacctgggtaaattaaaacattagaatgaataaactgttcgatgtatatcgctctcttgaataaagaaattactagttatctct</dnaseqindica>|
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<references>
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001071324.1 RefSeq:Os10g0463800]|
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* <ref name="ref1">
}}
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Zhang L, Ren Y, Lu B, Yang C, Feng Z, Liu Z, Chen J, Ma W, Wang Y, Yu X, Wang  Y, Zhang W, Wang Y, Liu S, Wu F, Zhang X, Guo X, Bao Y, Jiang L, Wan J. FLOURY ENDOSPERM7 encodes a regulator of starch synthesis and amyloplast development essential for peripheral endosperm development in rice. J Exp Bot. 2016 Feb;67(3):633-47. doi: 10.1093/jxb/erv469. Epub 2015 Nov 24. PubMed PMID: 26608643; PubMed Central PMCID: PMC4737065.
[[Category:Genes]]
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</ref>
[[Category:Japonica mRNA]]
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</references>
[[Category:Oryza Sativa Japonica Group]]
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[[Category:Japonica Genes]]
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==Structured Information==
[[Category:Japonica Chromosome 10]]
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[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 10]]
[[Category:Chromosome 10]]
 

Latest revision as of 03:41, 2 June 2017

The rice Os10g0463800 was reported as FLO7 in 2015 [1] by researchers from China.

Annotated Information

Gene Symbol

  • Os10g0463800 <=> FLO7

Function

  • FLO7 as a unique plant regulator required for starch synthesis and amyloplast development within the peripheral endosperm and provide new insights into the spatial regulation of endosperm development in rice.

Phenotypic analysis

  • Consistent with the phenotypic alternation in flo7 endosperm, the flo7 mutant had reduced amylose content and seriously disrupted amylopectin structure only in the peripheral endosperm.

Expression

  • FLO7 gene was expressed ubiquitously but exhibited a specific expression in the endosperm periphery.

You can also add sub-section(s) at will.

Labs working on this gene

  • State Key Laboratory for Crop Genetics and Germplasm Enhancement, Jiangsu Plant Gene Engineering Research Center, Nanjing Agricultural University, Nanjing 210095, PR China
  • National Key Facility for Crop Resources and Genetic Improvement, Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing 100081, PR China
  • College of Life Sciences, Nanjing Agricultural University, Nanjing 210095, PR China

References

  1. Zhang L, Ren Y, Lu B, Yang C, Feng Z, Liu Z, Chen J, Ma W, Wang Y, Yu X, Wang Y, Zhang W, Wang Y, Liu S, Wu F, Zhang X, Guo X, Bao Y, Jiang L, Wan J. FLOURY ENDOSPERM7 encodes a regulator of starch synthesis and amyloplast development essential for peripheral endosperm development in rice. J Exp Bot. 2016 Feb;67(3):633-47. doi: 10.1093/jxb/erv469. Epub 2015 Nov 24. PubMed PMID: 26608643; PubMed Central PMCID: PMC4737065.

Structured Information