Difference between revisions of "Os04g0271700"

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(Created page with "{{JaponicaGene| GeneName = Os04g0271700| Description = UDP-glucuronosyl/UDP-glucosyltransferase family protein| Version = NM_001058881.1 GI:115457491 GeneID:4335345| Lengt...")
 
 
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{{JaponicaGene|
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The rice '''''Os04g0271700''''' was reported as '''''OscZOG1''''' in 2015 <ref name="ref1" /> by researchers from China.
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GeneName = Os04g0271700|
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==Annotated Information==
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Description = UDP-glucuronosyl/UDP-glucosyltransferase family protein|
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===Function===
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Version = NM_001058881.1 GI:115457491 GeneID:4335345|
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* Putative zeatin O-glucosyltransferase OscZOG1 regulates root and shoot development and formation of agronomic traits in rice
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Length = 1762 bp|
 
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Definition = Oryza sativa Japonica Group Os04g0271700, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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===Expression===
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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* We found that OscZOG1 was preferentially expressed in shoot and root meristematic tissues and nascent organs.
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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* The growth of lateral roots was stimulated in the overexpression lines, but inhibited in RNA interference lines.
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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* In shoots, knockdown of OscZOG1 expression by RNA interference significantly improved tillering, panicle branching, grain number per panicle and seed size, which are important agronomic traits for grain yield.
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|
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Chromosome = [[:category:Japonica Chromosome 4|Chromosome 4]]|
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===Subcellular localization===
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AP = Chromosome 4:11422377..11424138|
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* The resulting fragment was introduced into 35S-GFP-JFH1 vector with the restriction sites XhoI and SpeI to generate a Cterminal GFP fusion construct. The OscZOG1-GFP constructs were transferred into Agrobacterium tumefaciens strain GV3101. Subcellular localization analysis showed that OscZOG1 was found to be localized both in cytoplasm and nucleus.
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CDS = 11422462..11423940|
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GCID = <gbrowseImage1>
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You can also add sub-section(s) at will.
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name=NC_008397:11422377..11424138
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source=RiceChromosome04
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==Labs working on this gene==
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preset=GeneLocation
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* State Key Laboratory of Plant Physiology and Biochemistry, College of Life Sciences, Zhejiang University, Hangzhou, China;
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</gbrowseImage1>|
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* Department of Biology - Plant Biology, University of Fribourg, Rue Albert-Gockel 3, CH-1700 Fribourg, Switzerland
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GSID = <gbrowseImage2>
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* State Key Laboratory of Plant Genomics, National Center for Plant Gene Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
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name=NC_008397:11422377..11424138
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* State Key Laboratory of Rice Biology, China National Rice Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou, China
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source=RiceChromosome04
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* State Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
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preset=GeneLocation
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==References==
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</gbrowseImage2>|
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<references>
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CDNA = <cdnaseq>atgcccagcgatggcagcttccgcatcgtcctcttcccgttcccggcgcagggccacttctccgccttcctctccctcgccgcccacctccacgacgcccagcccacggccgacatcaccatcgtctccaccccgcgcaacgtggaagacctccgccgccggtcgagctcccagacgcggtacctccggttccacgccctgccgttcgcgccagccgagcacggcctgcccggagacatcgagtcgaccgacgccgtgccgctcctccacttcatcacgctgttcgaggccaccgagtcgcgctcgctacaggacagcttcgacagcttcgtccgtgacttgatcaccgacgccggagcggacggtgccagggtctgcgtcatcgccgaccccttcctcgcgtggacgacagacgtcgcccgccggcgtggcgccgcgcacgccatcttcgtctcctgcggcgcgttcggcagcgtggtgttccactcgctgtggaaccacttgccgcacctgcgtgcgcccggtgacgacgcgttctgcctcccggaccacccggaggttactgtccaccggtcgcagcttccgccttacctactccacgccgacggcacggaccggtggtcggcccaccaccgccggcagacatcggccgggtacgacaccgacgcgattctcatcagcacgatggaggagttggagacgaccgggctgcgcatgctccggaaaacgatgggcgtcccggtctatcccatcggccctctagtgcgtcgccggacggagcactccgatcacatcggtgaccataacgacgatgacgtcaagcggtggctcgacacccgagaagagaggtcagtgctgtacatctcattcgggtctaataactcgctaaggcctgaccagatggttgacctcgccatggcactggagctcaccggcaggccgttcatttgggctatccgtccgccgttcgggtttgacatcgagaccaccaacggccgcgagttcagcgccgagtggttgccggaagggttcgaggagaggatgcgtgccaagaacattgggcttctcatccacgggtgggctccgcaggtgagcatcctcgcgcacgcgtccaccggcgcgttcctgagccactgcggctggaactctgtgctggagagcatggcgcacggcgtgccaatcatcgcgtggccgctcacggcggaccagttcttcaacgcccagatgctggaggagtggggcgcgtgcgtggaggtgtcccgcgggaactggccggactccccggcgctggagcgtgagagggtggtcgaggtcgtggagatggtgatggggattacggcgaaggcggacaagatacgacagagtgtgaagcagattcaggggatgattggtcgaactctggaggacggtggttcgtccaagacagcattggaggaattcttgaagctgcatggtcacattatgctcatgaaatgctga</cdnaseq>|
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* <ref name="ref1">
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AA = <aaseq>MPSDGSFRIVLFPFPAQGHFSAFLSLAAHLHDAQPTADITIVST                    PRNVEDLRRRSSSQTRYLRFHALPFAPAEHGLPGDIESTDAVPLLHFITLFEATESRS                    LQDSFDSFVRDLITDAGADGARVCVIADPFLAWTTDVARRRGAAHAIFVSCGAFGSVV                    FHSLWNHLPHLRAPGDDAFCLPDHPEVTVHRSQLPPYLLHADGTDRWSAHHRRQTSAG                    YDTDAILISTMEELETTGLRMLRKTMGVPVYPIGPLVRRRTEHSDHIGDHNDDDVKRW                    LDTREERSVLYISFGSNNSLRPDQMVDLAMALELTGRPFIWAIRPPFGFDIETTNGRE                    FSAEWLPEGFEERMRAKNIGLLIHGWAPQVSILAHASTGAFLSHCGWNSVLESMAHGV                    PIIAWPLTADQFFNAQMLEEWGACVEVSRGNWPDSPALERERVVEVVEMVMGITAKAD                    KIRQSVKQIQGMIGRTLEDGGSSKTALEEFLKLHGHIMLMKC</aaseq>|
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Shang XL, Xie RR, Tian H, Wang QL, Guo FQ. Putative zeatin
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DNA = <dnaseqindica>199..1677#atcccaaagcctgtctgccaactgccaagcgcatccttcccagcctcgctccccaccctatcgttcatcctgtccacccagagccattgccacacacacaccgaccggtgctgtcgtgcttcctctcctttcagacaaagcaaaaatttaatttccttccagtggagaacctcgaagtcaaagaacaacgtgttcaccatgcccagcgatggcagcttccgcatcgtcctcttcccgttcccggcgcagggccacttctccgccttcctctccctcgccgcccacctccacgacgcccagcccacggccgacatcaccatcgtctccaccccgcgcaacgtggaagacctccgccgccggtcgagctcccagacgcggtacctccggttccacgccctgccgttcgcgccagccgagcacggcctgcccggagacatcgagtcgaccgacgccgtgccgctcctccacttcatcacgctgttcgaggccaccgagtcgcgctcgctacaggacagcttcgacagcttcgtccgtgacttgatcaccgacgccggagcggacggtgccagggtctgcgtcatcgccgaccccttcctcgcgtggacgacagacgtcgcccgccggcgtggcgccgcgcacgccatcttcgtctcctgcggcgcgttcggcagcgtggtgttccactcgctgtggaaccacttgccgcacctgcgtgcgcccggtgacgacgcgttctgcctcccggaccacccggaggttactgtccaccggtcgcagcttccgccttacctactccacgccgacggcacggaccggtggtcggcccaccaccgccggcagacatcggccgggtacgacaccgacgcgattctcatcagcacgatggaggagttggagacgaccgggctgcgcatgctccggaaaacgatgggcgtcccggtctatcccatcggccctctagtgcgtcgccggacggagcactccgatcacatcggtgaccataacgacgatgacgtcaagcggtggctcgacacccgagaagagaggtcagtgctgtacatctcattcgggtctaataactcgctaaggcctgaccagatggttgacctcgccatggcactggagctcaccggcaggccgttcatttgggctatccgtccgccgttcgggtttgacatcgagaccaccaacggccgcgagttcagcgccgagtggttgccggaagggttcgaggagaggatgcgtgccaagaacattgggcttctcatccacgggtgggctccgcaggtgagcatcctcgcgcacgcgtccaccggcgcgttcctgagccactgcggctggaactctgtgctggagagcatggcgcacggcgtgccaatcatcgcgtggccgctcacggcggaccagttcttcaacgcccagatgctggaggagtggggcgcgtgcgtggaggtgtcccgcgggaactggccggactccccggcgctggagcgtgagagggtggtcgaggtcgtggagatggtgatggggattacggcgaaggcggacaagatacgacagagtgtgaagcagattcaggggatgattggtcgaactctggaggacggtggttcgtccaagacagcattggaggaattcttgaagctgcatggtcacattatgctcatgaaatgctgacgccgagagaaataattttctgttttagcaatttgcccaaccttgaaacgtggtgcctgaaataacctattatgtgttcttgaat</dnaseqindica>|
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O-glucosyltransferase OscZOG1 regulates root and shoot development and formation
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001058881.1 RefSeq:Os04g0271700]|
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of agronomic traits in rice. J Integr Plant Biol. 2016 Jul;58(7):627-41. doi:
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}}
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10.1111/jipb.12444. Epub 2016 Jan 2. PubMed PMID: 26507364.
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[[Category:Genes]]
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</ref>
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[[Category:Japonica mRNA]]
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</references>
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[[Category:Oryza Sativa Japonica Group]]
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[[Category:Japonica Genes]]
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[[Category:Japonica Chromosome 4]]
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==Structured Information==
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[[Category:Chromosome 4]]
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]

Latest revision as of 10:17, 18 January 2018

The rice Os04g0271700 was reported as OscZOG1 in 2015 [1] by researchers from China.

Annotated Information

Function

  • Putative zeatin O-glucosyltransferase OscZOG1 regulates root and shoot development and formation of agronomic traits in rice

Expression

  • We found that OscZOG1 was preferentially expressed in shoot and root meristematic tissues and nascent organs.
  • The growth of lateral roots was stimulated in the overexpression lines, but inhibited in RNA interference lines.
  • In shoots, knockdown of OscZOG1 expression by RNA interference significantly improved tillering, panicle branching, grain number per panicle and seed size, which are important agronomic traits for grain yield.

Subcellular localization

  • The resulting fragment was introduced into 35S-GFP-JFH1 vector with the restriction sites XhoI and SpeI to generate a Cterminal GFP fusion construct. The OscZOG1-GFP constructs were transferred into Agrobacterium tumefaciens strain GV3101. Subcellular localization analysis showed that OscZOG1 was found to be localized both in cytoplasm and nucleus.

You can also add sub-section(s) at will.

Labs working on this gene

  • State Key Laboratory of Plant Physiology and Biochemistry, College of Life Sciences, Zhejiang University, Hangzhou, China;
  • Department of Biology - Plant Biology, University of Fribourg, Rue Albert-Gockel 3, CH-1700 Fribourg, Switzerland
  • State Key Laboratory of Plant Genomics, National Center for Plant Gene Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
  • State Key Laboratory of Rice Biology, China National Rice Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou, China
  • State Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.

References

  1. ↑ Shang XL, Xie RR, Tian H, Wang QL, Guo FQ. Putative zeatin O-glucosyltransferase OscZOG1 regulates root and shoot development and formation of agronomic traits in rice. J Integr Plant Biol. 2016 Jul;58(7):627-41. doi: 10.1111/jipb.12444. Epub 2016 Jan 2. PubMed PMID: 26507364.


Structured Information