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| − | Please input one-sentence summary here.
| + | The rice '''''Os05g0276100''''' was reported as '''''OsCHX14''''' in 2014 <ref name="ref1" /> by researchers from Netherlands, UK and China. |
| | | | |
| | ==Annotated Information== | | ==Annotated Information== |
| | + | ===Gene Symbol=== |
| | + | *'''''Os04g0459000''''' '''''<=>''''' '''''OsCHX14''''' |
| | ===Function=== | | ===Function=== |
| − | Please input function information here.
| + | * OsCHX14 may play an important role in K+ homeostasis during flowering in rice. |
| | | | |
| | ===Expression=== | | ===Expression=== |
| − | Please input expression information here.
| + | * Expression profiling confirmed that among 17 CHX genes in rice, OsCHX14 was the only member that showed an expression polymorphism, not only in osjar1 mutants but also in RNAi (RNA interference) lines of OsCOI1, another key member of the JA signaling pathway. This suggests that the expression of OsCHX14 is regulated by the JA signaling pathway. |
| − | | + | * Promoter–b-glucuronidase (GUS) analysis of transgenic rice revealed that OsCHX14 is mainly expressed in lodicules and the region close by throughout the flowering process. |
| − | ===Evolution=== | + | |
| − | Please input evolution information here.
| + | ===Subcellular localization=== |
| | + | * OsCHX14 is localized to the endoplasmic reticulum. The OsCHX14 ORF was cloned in-frame with a GFP reporter gene and transiently expressed in Arabidopsis root protoplasts together with an ER marker tagged with an RFP reporter. |
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| | You can also add sub-section(s) at will. | | You can also add sub-section(s) at will. |
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| | ==Labs working on this gene== | | ==Labs working on this gene== |
| − | Please input related labs here.
| + | * State Key Laboratory of Plant Physiology and Biochemistry, College of Life Sciences, Zhejiang University, Hangzhou, China; |
| − | | + | * Department of Biology - Plant Biology, University of Fribourg, Rue Albert-Gockel 3, CH-1700 Fribourg, Switzerland |
| | + | * State Key Laboratory of Plant Genomics, National Center for Plant Gene Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China. |
| | + | * State Key Laboratory of Rice Biology, China National Rice Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou, China |
| | + | * State Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China. |
| | ==References== | | ==References== |
| − | Please input cited references here.
| + | <references> |
| | + | * <ref name="ref1"> |
| | + | Chen Y, Ma J, Miller AJ, Luo B, Wang M, Zhu Z, Ouwerkerk PB. OsCHX14 is |
| | + | Involved in the K+ Homeostasis in Rice (Oryza sativa) Flowers. Plant Cell |
| | + | Physiol. 2016 Jul;57(7):1530-1543. Epub 2016 May 6. PubMed PMID: 27903806. |
| | + | </ref> |
| | + | </references> |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]] |
| − | GeneName = Os05g0276100|
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| − | Description = Similar to Na+/H+ exchangeing protein-like (Cation/H+ exchanger)|
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| − | Version = NM_001061611.1 GI:115462952 GeneID:4338277|
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| − | Length = 2849 bp|
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| − | Definition = Oryza sativa Japonica Group Os05g0276100, complete gene.|
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| − | Source = Oryza sativa Japonica Group
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| − | | |
| − | ORGANISM Oryza sativa Japonica Group
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| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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| − | clade; Ehrhartoideae; Oryzeae; Oryza.
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| − | |
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| − | Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
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| − | AP = Chromosome 5:11346123..11348971|
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| − | CDS = 11346273..11346467,11346587..11348764|
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| − | GCID = <gbrowseImage1>
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| − | name=NC_008398:11346123..11348971
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| − | source=RiceChromosome05
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| − | preset=GeneLocation
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| − | </gbrowseImage1>|
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| − | GSID = <gbrowseImage2>
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| − | name=NC_008398:11346123..11348971
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| − | source=RiceChromosome05
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| − | preset=GeneLocation
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| − | </gbrowseImage2>|
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| − | CDNA = <cdnaseq>atggctcctgaggcggcggcggcggccttgaagccgatgaaggcaacgtcggacggcgtgttccagggggaggaccccctggaagcggccctgcctctggccatcgtgcagatttgcatcgtcgtcgtgctcacccgcgtgctcgccttcttcctccgcccgctccggcagccgcgcgtcatcgcggagatcatcggcggcatcatgctcggcccgtccgcgatcggccggaacagcgcgttcatcaacacggtgttccccaagcagagcctcacggtgctcgacaccctcgccaacatcggcctcctcttcttcctcttcctcgtcggcctcgagctcgacctccgcgccatccgccgcacgggagctggcgcgctcgccatcgccgtcgccggcatctccctccccttcgtcctcgggatcggcacctccgtcgtcctccagaacaccgtcaaccgcggcgtccccacggggcccttcctcgtcttcatgggcgtcgccctctccatcaccgcgttcccggtgctggcgcgcatcctcgccgagctcaagctgctcaccaccgacctcggccgcatggccatgtccgcggcggccgtgaacgacgtcgccgcgtggatactcctcgcgctcgccatcgcgttgtcgggctccggctcgcctttcgtgtcgctctgggtgctcctcagcggcgtcggcttcgtcctctcgtcgttcttcttcatccggccgctgctctcgtggatggcgcggcgatcccccgagggcgagcccgtgaaggagctatacatatgcacgacgctcaccatcgtgctcgccgccggcttcatcaccgacaccatcggcatccacgcgctgttcggcgccttcatcgtcggcatcatcgtgcccaaggaagggcccttcgctggcgtcctcctggagaaggtggaggacctcatctctggcctcttcctgccgctctacttcgtgtcgagtggcctcaagaccaacgtcctgaccatcaagggcggggactcgtgggggctcctcgtgctcgtcgtcgcgacggcgtgcatcggcaagatcggcggcacagtgctcgcgtcgctcatcgtgcgtgtgccgctccgtgaggcggtgacgctcggggtgctgatgaacaccaaggggctcgtggagctcatcgtgctcaacatcggcaaggaccggcacgtcctcaacgacgagaccttcgccatcctcgtgctcatggcgctcataaacaccttcatcaccacgccgctggtgatggccatctacaagccggcgcggcgcgcccccccgtacaagaaccgcgccgtccagcgcccgaaccccgacgacgagctccgcatgatggtgtgcttccacagcacgcgaaacatccccaccatgatcaacctcatggagtcgtcgcgtgggacgcggcggcgcggcatcaccgtgtacgccatgcacctcgtcgagctctcggagcggtcgtccgccatcaacatggtccacaaggcgcggcgcaacgggatgccgttctggaaccggcggcgcaacggggacggcgaccagctcgtcgtcgcgttcgagacgtaccagcagctgagccacgtgtccattcgcgccatgacggccatctccgacctccacaccatccacgaggacgtggtcaccagcgcgcaccagaagcgcgccgcgctcatcgtgctccccttccacaagctccaccagatggacggccacatggagtccctcggcgacgagtaccagcacatcaaccagcgggtgctccaccacgcgccgtgctccgtcggcatcctcgtcgaccgcggcctcggcggcgccgcgcaggtcgccgccagcgacgtgtcctacaacatcgtcgtcctcttcttcggcggccgggacgaccgcgaggccctctcctacgccacgcgcatggtcgagcacccgggcatcgcactccacgtgatacgcttcgtcccagagtccggcggcggcggcgcgaacgacaaagccgcggcggacgatgcgttcctcgcagagttccgcggcaaagtcgccggcgggaacgactccatccggtacgaggagaggacgtccagagggaaggcggacgtggtggaggcgatcaaggcgatgggtccgaccaacctgttcctcgttggacaggggtcgccgtgcgcgccgctgatggaaccgagcgctgagtgcccggagctcgggccggtggggagctacctggcgatgccggacttctcgacggtggcgtcggtgctggtgatgaagcagtacgacccgacggcggagcactacgaactcgtcgaggaggtcgcggacaccgccgtggacatcgacacaccggggcctcgtagagggtga</cdnaseq>|
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| − | AA = <aaseq>MAPEAAAAALKPMKATSDGVFQGEDPLEAALPLAIVQICIVVVL TRVLAFFLRPLRQPRVIAEIIGGIMLGPSAIGRNSAFINTVFPKQSLTVLDTLANIGL LFFLFLVGLELDLRAIRRTGAGALAIAVAGISLPFVLGIGTSVVLQNTVNRGVPTGPF LVFMGVALSITAFPVLARILAELKLLTTDLGRMAMSAAAVNDVAAWILLALAIALSGS GSPFVSLWVLLSGVGFVLSSFFFIRPLLSWMARRSPEGEPVKELYICTTLTIVLAAGF ITDTIGIHALFGAFIVGIIVPKEGPFAGVLLEKVEDLISGLFLPLYFVSSGLKTNVLT IKGGDSWGLLVLVVATACIGKIGGTVLASLIVRVPLREAVTLGVLMNTKGLVELIVLN IGKDRHVLNDETFAILVLMALINTFITTPLVMAIYKPARRAPPYKNRAVQRPNPDDEL RMMVCFHSTRNIPTMINLMESSRGTRRRGITVYAMHLVELSERSSAINMVHKARRNGM PFWNRRRNGDGDQLVVAFETYQQLSHVSIRAMTAISDLHTIHEDVVTSAHQKRAALIV LPFHKLHQMDGHMESLGDEYQHINQRVLHHAPCSVGILVDRGLGGAAQVAASDVSYNI VVLFFGGRDDREALSYATRMVEHPGIALHVIRFVPESGGGGANDKAAADDAFLAEFRG KVAGGNDSIRYEERTSRGKADVVEAIKAMGPTNLFLVGQGSPCAPLMEPSAECPELGP VGSYLAMPDFSTVASVLVMKQYDPTAEHYELVEEVADTAVDIDTPGPRRG</aaseq>|
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| − | DNA = <dnaseqindica>151..345#465..2642#gtctttctgctggccaccaccctccccgtcttccttggagataggtggcaggtggctagagagggatcaagggtaggagggagaggaacggatcgcgcgcgcgcgacacgtacaccacacacatccactcacggcacggtacggccggccatggctcctgaggcggcggcggcggccttgaagccgatgaaggcaacgtcggacggcgtgttccagggggaggaccccctggaagcggccctgcctctggccatcgtgcagatttgcatcgtcgtcgtgctcacccgcgtgctcgccttcttcctccgcccgctccggcagccgcgcgtcatcgcggagatcatcgtacgtcggttcttgtgaataattctggtcgctttcgatcgatcgatgtgttcgtggaagctaggttttgattggtttctcgtggggtttggtttgatctgatggtatggagagttcagggcggcatcatgctcggcccgtccgcgatcggccggaacagcgcgttcatcaacacggtgttccccaagcagagcctcacggtgctcgacaccctcgccaacatcggcctcctcttcttcctcttcctcgtcggcctcgagctcgacctccgcgccatccgccgcacgggagctggcgcgctcgccatcgccgtcgccggcatctccctccccttcgtcctcgggatcggcacctccgtcgtcctccagaacaccgtcaaccgcggcgtccccacggggcccttcctcgtcttcatgggcgtcgccctctccatcaccgcgttcccggtgctggcgcgcatcctcgccgagctcaagctgctcaccaccgacctcggccgcatggccatgtccgcggcggccgtgaacgacgtcgccgcgtggatactcctcgcgctcgccatcgcgttgtcgggctccggctcgcctttcgtgtcgctctgggtgctcctcagcggcgtcggcttcgtcctctcgtcgttcttcttcatccggccgctgctctcgtggatggcgcggcgatcccccgagggcgagcccgtgaaggagctatacatatgcacgacgctcaccatcgtgctcgccgccggcttcatcaccgacaccatcggcatccacgcgctgttcggcgccttcatcgtcggcatcatcgtgcccaaggaagggcccttcgctggcgtcctcctggagaaggtggaggacctcatctctggcctcttcctgccgctctacttcgtgtcgagtggcctcaagaccaacgtcctgaccatcaagggcggggactcgtgggggctcctcgtgctcgtcgtcgcgacggcgtgcatcggcaagatcggcggcacagtgctcgcgtcgctcatcgtgcgtgtgccgctccgtgaggcggtgacgctcggggtgctgatgaacaccaaggggctcgtggagctcatcgtgctcaacatcggcaaggaccggcacgtcctcaacgacgagaccttcgccatcctcgtgctcatggcgctcataaacaccttcatcaccacgccgctggtgatggccatctacaagccggcgcggcgcgcccccccgtacaagaaccgcgccgtccagcgcccgaaccccgacgacgagctccgcatgatggtgtgcttccacagcacgcgaaacatccccaccatgatcaacctcatggagtcgtcgcgtgggacgcggcggcgcggcatcaccgtgtacgccatgcacctcgtcgagctctcggagcggtcgtccgccatcaacatggtccacaaggcgcggcgcaacgggatgccgttctggaaccggcggcgcaacggggacggcgaccagctcgtcgtcgcgttcgagacgtaccagcagctgagccacgtgtccattcgcgccatgacggccatctccgacctccacaccatccacgaggacgtggtcaccagcgcgcaccagaagcgcgccgcgctcatcgtgctccccttccacaagctccaccagatggacggccacatggagtccctcggcgacgagtaccagcacatcaaccagcgggtgctccaccacgcgccgtgctccgtcggcatcctcgtcgaccgcggcctcggcggcgccgcgcaggtcgccgccagcgacgtgtcctacaacatcgtcgtcctcttcttcggcggccgggacgaccgcgaggccctctcctacgccacgcgcatggtcgagcacccgggcatcgcactccacgtgatacgcttcgtcccagagtccggcggcggcggcgcgaacgacaaagccgcggcggacgatgcgttcctcgcagagttccgcggcaaagtcgccggcgggaacgactccatccggtacgaggagaggacgtccagagggaaggcggacgtggtggaggcgatcaaggcgatgggtccgaccaacctgttcctcgttggacaggggtcgccgtgcgcgccgctgatggaaccgagcgctgagtgcccggagctcgggccggtggggagctacctggcgatgccggacttctcgacggtggcgtcggtgctggtgatgaagcagtacgacccgacggcggagcactacgaactcgtcgaggaggtcgcggacaccgccgtggacatcgacacaccggggcctcgtagagggtgatgcccttagtcgtaagtcgtaattaacaggcatatacttctactaatacaaattgtgtaatatgatagtgcaatttaattgtagacgtattttcatccctcaggaggatggaccttgatcctccaatgtgtttttacatctgttgtacacttgtaaaatacaatagttctggaattttatgaaagcacttgacacaatatagtgtat</dnaseqindica>|
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| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001061611.1 RefSeq:Os05g0276100]|
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| − | }}
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| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
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| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 5]]
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| − | [[Category:Chromosome 5]]
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