Difference between revisions of "BGIOSGA000478"
(Created page with "{{IndicaGene|
GeneName = BGIOSGA000478|
Description = Alpha-glucan phosphorylase, h isozyme|
Definition = Oryza sativa Indica Group BGIOSGA000478, complete gene.|
tag = P0...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{IndicaGene| | {{IndicaGene| | ||
GeneName = BGIOSGA000478| | GeneName = BGIOSGA000478| | ||
Revision as of 18:04, 20 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
BGIOSGA000478 |
|---|---|
| Description |
Alpha-glucan phosphorylase, h isozyme |
| Definition |
Oryza sativa Indica Group BGIOSGA000478, complete gene. |
| LocusTag |
P0529H11.34 |
| Ensembl Transcript ID |
BGIOSGA000478-TA |
| Ensembl Protein ID |
BGIOSGA000478-PA |
| Length |
5778 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:40193147..40198924 |
| Sequence Coding Region |
40198724..40198924,40198442..40198621,40197974..40198150,40197803..40197888,40197122..40197311 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome01:40193147..40198924 source=RiceIndica01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome01:40193147..40198924 source=RiceIndica01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGCCGGAGAGCAACGGCGCCGCGTGCGGCGCGGCGGAGAAGGTGAAGCCGGCGGCCAGCCCCGCGTCGGAGGAGCCGGCCGCCATCGCCGGTAACATCTCCTTCCACGCGCAGTACAGCCCCCACTTCTCGCCGCTCGCGTTCGGCCCCGAGCAGGCCTTCTACTCCACCGCCGAGAGCGTCCGCGACCACCTCGTCCAGAGATGGAACGAGACGTACTTGCATTTCCACAAGACGGATCCGAAGCAGACGTACTACCTCTCCATGGAGTACCTGCAGGGCCGCGCGCTCACCAACGCCGTCGGCAACCTCGGCATCACCGGCGCCTACGCGGAGGCCGTGAAGAAGTTCGGGTACGAGCTCGAGGCCCTCGTCGGGCAGGAAAAAGATGCAGCTCTGGGAAATGGTGGCTTGGGTAGGCTCGCATCTTGCTTTTTGGATTCGATGGCAACACTAAATTTGCCTGCTTGGGGATATGGTCTGCGGTACCGATATGGTCTATTCAAACAATGCATCACCAAGGAAGGCCAGGAAGAAATTGCTGAAGATTGGCTTGAGAAGTTCAGCCCATGGGAAATTGTCAGGCATGACATTGTATACCCAATCAGATTTTTTGGCCACGTTGAGATTTTGCCAGATGGATCTCGTAAATGGGTGGGGGGAGAAGTTCTCAGTGCTTTAGCATATGATGTGCCAATTCCTGGGTACAAGACAAAAAATGCAATCAGTCTTCGTCTTTGGGACGCAAAAGCTAGTGCGGAGGATTTTAACTTATTTCAATTCAATGATGGCCAGTATGAGTCCGCTGCTCAACTTCATGCTAGGGCACAACAGATATGTGCCGTTCTCTATCCCGGTGATGCTACAGAAGAAGGAAAGCTTCTCAGACTGAAGCAACAGTATTTCCTTTGCAGTGCATCGCTTCAGGATATTTTTTTCAGGTTTAAAGAAAGGAAAGCTGACAGAGTTTCTGGGAAATGGAGTGAGTTCCCTGCAAAAGTTGCTGTTCAATTGAATGACACTCACCCAACTCTTGCGATTCCTGAGCTGATGAGGCTACTCATGGATGTGGAGGGACTTGGTTGGGATGAAGCATGGGATATCACAAATAAAACAATTGCCTACACCAATCACACTGTTCTTCCTGAAGCCCTTGAGAAATGGTCGCAGATTGTAATGAGGAAATTACTTCCACGACACATGGAAATTATCGAGGAAATTGACAAGCGGTTCAAAGAAATGGTAATCTCCACCCGGAAGGAAATGGAGGGAAAGATTGACTCCATGAGAATCTTAGACAACTCAAATCCTCAGAAGCCAGTAGTGCGCATGGCAAATTTGTGCGTAGTGTCTGCCCATACGGTGAATGGAGTGGCTGAGTTACACAGCAACATTTTGAAGGAAGAGCTTTTTGCAGACTATCTCTCTATATGGCCCAACAAATTTCAGAACAAAACAAATGGAATTACACCTCGTAGATGGCTCCGTTTCTGCAACCCAGAGTTGAGTGAAATAGTAACAAAATGGCTAAAAACAGATCAGTGGACAAGCAACCTTGATCTTCTTACCGGACTTCGGAAATTTGCAGATGATGAAAAGCTTCATGCTGAGTGGGCATCAGCTAAGTTGGCTAGCAAAAAACGCCTAGCCAAGCATGTGTTGGATGTGACAGGTGTTACAATCGACCCAAATAGCCTTTTTGATATACAAATTAAACGCATTCATGAGTACAAGAGACAGCTGCTAAACATTTTGGGAGCTGTTTACAGATACAAGAAGTTAAAGGGAATGAGTGCAGAGGAGAGACAAAAAGTTACGCCACGCACTGTCATGATAGGGGGAAAAGCATTCGCGACTTACACCAATGCCAAAAGAATAGTAAAATTGGTAAATGATGTTGGTGCTGTGGTGAACAATGATCCTGATGTTAATAAATACCTAAAGGTGGTGTTCATTCCCAACTACAATGTATCTGTGGCCGAGGTGCTCATTCCTGGGAGTGAACTGTCACAGCACATCAGTACCGCAGGCATGGAAGCAAGTGGAACGAGTAATATGAAATTCTCTCTGAATGGTTGTGTTATCATTGGTACTCTTGATGGAGCTAATGTTGAGATAAGAGAGGAAGTGGGACAAGAAAATTTCTTCCTTTTTGGTGCCAAGGCAGATCAAGTTGCTGGGCTGAGGAAGGATAGAGAGAATGGCTTGTTCAAACCAGACCCACGCTTTGAAGAAGCCAAGCAGCTTATAAGGAGTGGTGCTTTTGGCACCTATGACTATGCTCCCCTCTTGGATTCTCTTGAAGGAAATTCTGGATTTGGTCGTGGTGATTATTTCCTCGTTGGCTATGATTTCCCAAGCTATATTGATGCACAGGCCCAGGTTGATGAAGCCTACAAGGATAAGAAAAAATGGATCAAGATGTCTATACTGAACACAGCTGGAAGTGGCAAATTCAGCAGCGACCGTACTATCGCTCAGTATGCAAAGGAAATATGGGGCATTACTGCTAGCCCTGTCTCCTAA</cdnaseq> |
| Protein Sequence |
<aaseq>MPESNGAACGAAEKVKPAASPASEEPAAIAGNISFHAQYSPHFSPLAFGPEQAFYSTAESVRDHLVQRWNETYLHFHKTDPKQTYYLSMEYLQGRALTNAVGNLGITGAYAEAVKKFGYELEALVGQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQCITKEGQEEIAEDWLEKFSPWEIVRHDIVYPIRFFGHVEILPDGSRKWVGGEVLSALAYDVPIPGYKTKNAISLRLWDAKASAEDFNLFQFNDGQYESAAQLHARAQQICAVLYPGDATEEGKLLRLKQQYFLCSASLQDIFFRFKERKADRVSGKWSEFPAKVAVQLNDTHPTLAIPELMRLLMDVEGLGWDEAWDITNKTIAYTNHTVLPEALEKWSQIVMRKLLPRHMEIIEEIDKRFKEMVISTRKEMEGKIDSMRILDNSNPQKPVVRMANLCVVSAHTVNGVAELHSNILKEELFADYLSIWPNKFQNKTNGITPRRWLRFCNPELSEIVTKWLKTDQWTSNLDLLTGLRKFADDEKLHAEWASAKLASKKRLAKHVLDVTGVTIDPNSLFDIQIKRIHEYKRQLLNILGAVYRYKKLKGMSAEERQKVTPRTVMIGGKAFATYTNAKRIVKLVNDVGAVVNNDPDVNKYLKVVFIPNYNVSVAEVLIPGSELSQHISTAGMEASGTSNMKFSLNGCVIIGTLDGANVEIREEVGQENFFLFGAKADQVAGLRKDRENGLFKPDPRFEEAKQLIRSGAFGTYDYAPLLDSLEGNSGFGRGDYFLVGYDFPSYIDAQAQVDEAYKDKKKWIKMSILNTAGSGKFSSDRTIAQYAKEIWGITASPVS</aaseq> |
| Gene Sequence |
<dnaseqindica>1..201#304..483#775..951#1037..1122#1614..1803#2280..2372#2782..2966#3114..3231#3315..3446#3654..3872#3958..4161#4264..4422#4628..4891#5094..5284#5652..5778#ATGCCGGAGAGCAACGGCGCCGCGTGCGGCGCGGCGGAGAAGGTGAAGCCGGCGGCCAGCCCCGCGTCGGAGGAGCCGGCCGCCATCGCCGGTAACATCTCCTTCCACGCGCAGTACAGCCCCCACTTCTCGCCGCTCGCGTTCGGCCCCGAGCAGGCCTTCTACTCCACCGCCGAGAGCGTCCGCGACCACCTCGTCCAGGTTCGTGAGCACGCAGAATCCTAAGCGTTCGTCGCGGCGCCCGGCCGTGCCCGAGGCCAGAGGCCCAGAGGTGTGATCTCTACTTCCCCCGCGTGTGTGCAGAGATGGAACGAGACGTACTTGCATTTCCACAAGACGGATCCGAAGCAGACGTACTACCTCTCCATGGAGTACCTGCAGGGCCGCGCGCTCACCAACGCCGTCGGCAACCTCGGCATCACCGGCGCCTACGCGGAGGCCGTGAAGAAGTTCGGGTACGAGCTCGAGGCCCTCGTCGGGCAGGTGAGCTCCCTTTGAGTGTTTTCTAAATTAAAACGTGCTATTTTTTTCTGAAGACTATTTTAGTACAGTATCGCTTGTTAGCGTCATTATTAAACTAGCTAGCGCTTTGTTTGATTGTGCCATAATCTAACGGGAATAACGCTTGTATGTATTCTTATTTTAGAAACAGTTGAAGTATCCGGTTAGATGGATTAGATTTGATCCGATGTTTAACCAAAATAAAGTATGGTTCAAAAGCATAGAAGTTGTACCGTATCCATTTTCTAAACATGTGTTCTGCTCTGTACTCAGGAAAAAGATGCAGCTCTGGGAAATGGTGGCTTGGGTAGGCTCGCATCTTGCTTTTTGGATTCGATGGCAACACTAAATTTGCCTGCTTGGGGATATGGTCTGCGGTACCGATATGGTCTATTCAAACAATGCATCACCAAGGAAGGCCAGGAAGAAATTGCTGAAGATTGGCTTGAGGTACCAACTGGAATGTACACAAGTTCCTCTCTCGTCATCAGTTTCTCTAGCTGCTGCTGATGAGCCACATGTTTATTTCTTTCAGAAGTTCAGCCCATGGGAAATTGTCAGGCATGACATTGTATACCCAATCAGATTTTTTGGCCACGTTGAGATTTTGCCAGATGGATCGTAAGTACAAGTTCCATTTTTTTAGAAAATGTTGACTAATAGTTAAATATGACATTATATAGCTTGTGTTGCCCTCCATATTAAAAAAAAAAGGTGCCTGAATCAGATTTATTTTCTTCAACTCCATTTAGAGATCTAGGATCATTCTTGGATATAACGAAAGAACATTATGCTTGCTTTGCTAGGCCTTTTCAGCGCATTTTCTTGACCTCTACTTCTCTTTTCACTCTTTTGGCAACTGGATCAAATGACCAAAACCCATGAGAAATGCTTTGCCAACACTATTCTTGTTTCAAAGTACTATTATTTCATGCTGTTTAAAAGAAACAGGGTTAATACAATTCTTATTTTTGGCTTGGTAGACATGATAGTTGCAATTCTGTACATTGGAATTATCATGCATTGTGCAGGCCCCATATCAGGCATACCTGTAAATTGGTGTTTACTGCAAGGATTTCTGTCCTTTTAACTGCTTGTTTACTTTTGTTTAGTCGTAAATGGGTGGGGGGAGAAGTTCTCAGTGCTTTAGCATATGATGTGCCAATTCCTGGGTACAAGACAAAAAATGCAATCAGTCTTCGTCTTTGGGACGCAAAAGCTAGTGCGGAGGATTTTAACTTATTTCAATTCAATGATGGCCAGTATGAGTCCGCTGCTCAACTTCATGCTAGGGCACAACAGGTGACATTTCATCTTGAACTGATTTTGTCAGTTGTGCATTTAAGTTGCATTAGCAGGGACTAAATCAAGACTGATGCCTTTAATTGATGCAAATACTTCTGCTGATCAATATTTATTCTTTTGTCACATAAACATCTATCAGTCATTTTTAAGAAATAGAAACAGCAATGTAGTATATACAACCTAACTCAATGTTGTGTTTCTCAGTACAGTACCTTTTTAAACGGTGAATATATCTCAATCAAACAGCTTACAGTATATCTTTAATCAAACAGTTTAGTTGGTCACTGAAAAAACACAAGTTGTGTCTTGTAGTTTGGCATGGTTTTCAATTGTGGCTATAGGTCCATTTTAACTAAGAATTACAGTAGAAAATGTTGTGCTATATATTTCCTATCTTTTATTGTATATTCTCGCCATTCTTTTCCCTTAATGAATGTTATGTTGATAGACGTCTCTTGTCTATGGCTCTGCAGATATGTGCCGTTCTCTATCCCGGTGATGCTACAGAAGAAGGAAAGCTTCTCAGACTGAAGCAACAGTATTTCCTTTGCAGTGCATCGCTTCAGGTAATAATTAATTTTATTTGGAAGCATGGTTACTGTAAGAGAAACCTATCACAGTGCCTCCTATGTCCACACCAGTCTTTTGTTGTGAATTGTTGTTGTGCGATACTCATTAAAGAGTGATGGTTGTAGTGATCTATTGTTGCAACATTCTATATGTCTTTTCTGTCTTGAATGGGAGAATGTTAAACCGAGTTGTATCAAGGAGAGTTATATTTTTATCTAAAAAAAGGAGAGTTAAATTTAACAAATTATCATGAGCATCATTTCAATCCAAGAACATTTGGGTCACTCTTTATTTTTACTTTTAAGTTTTTTTTTTAATCTAAGCTTTCTCAGTGTCTTGATTTTTTTAATATCTGCAAGGACTGAAGACTGTTCATAAGCATAACTGACAATGAACTATTTGCAGGATATTTTTTTCAGGTTTAAAGAAAGGAAAGCTGACAGAGTTTCTGGGAAATGGAGTGAGTTCCCTGCAAAAGTTGCTGTTCAATTGAATGACACTCACCCAACTCTTGCGATTCCTGAGCTGATGAGGCTACTCATGGATGTGGAGGGACTTGGTTGGGATGAAGCATGGGATATCACAAATAAGTGAGCTCTAATATGACGAAGTGACAATATAATTTGATCTCTTTTCTTATCTTTTTCCACCATTGTTTATTTTTCCGCTTTTCATTTTAACAAGAGTAATTCAACTTAAAAGCTTGACCTAATCAATAAATTATTTGAATGGTCCAGAACAATTGCCTACACCAATCACACTGTTCTTCCTGAAGCCCTTGAGAAATGGTCGCAGATTGTAATGAGGAAATTACTTCCACGACACATGGAAATTATCGAGGAAATTGACAAGCGGGTAAGTGCCATGTCACATGTATGCATACTTTTTATACACTACAGTTATGGTAAAATATGACACCTAGTGCAATTGGCTTGCAGTTCAAAGAAATGGTAATCTCCACCCGGAAGGAAATGGAGGGAAAGATTGACTCCATGAGAATCTTAGACAACTCAAATCCTCAGAAGCCAGTAGTGCGCATGGCAAATTTGTGCGTAGTGTCTGCCCATACGGTAAGTGCAGTTATTTGTGTTTGATGCTCAATGTTCTATAACCTTTTTCACAACACAACTATTCATCATGTCCATTCTAATGGAAACTACCTTGACCATCTTACCATCAATATGGATCCCCACTATTTTTTTAAGTATGTCAACATTATTTGCTTTCTCATATAAGTTGAGGAGGTCGTACTGAAGTGTGCTGAATTCTCTCCACAGGTGAATGGAGTGGCTGAGTTACACAGCAACATTTTGAAGGAAGAGCTTTTTGCAGACTATCTCTCTATATGGCCCAACAAATTTCAGAACAAAACAAATGGAATTACACCTCGTAGATGGCTCCGTTTCTGCAACCCAGAGTTGAGTGAAATAGTAACAAAATGGCTAAAAACAGATCAGTGGACAAGCAACCTTGATCTTCTTACCGGACTTCGGAAAGTATGTGTGCATCCTTCTAAACCTTGCACCATTTTTCCTTGCTATTACTCATCTGACTAATTAAGTATAACCGAAAGCGTTACAGTTTGCAGATGATGAAAAGCTTCATGCTGAGTGGGCATCAGCTAAGTTGGCTAGCAAAAAACGCCTAGCCAAGCATGTGTTGGATGTGACAGGTGTTACAATCGACCCAAATAGCCTTTTTGATATACAAATTAAACGCATTCATGAGTACAAGAGACAGCTGCTAAACATTTTGGGAGCTGTTTACAGATACAAGAAGTTAAAGGTACTAAAGACTCCCCATACTCTTCAGTAATACTATGCTTGTCTAAATTTAAATGGAAGTTCTCAATATTTCGGTTCTGAAATAGCCTTATGAATCTTGTAGGGAATGAGTGCAGAGGAGAGACAAAAAGTTACGCCACGCACTGTCATGATAGGGGGAAAAGCATTCGCGACTTACACCAATGCCAAAAGAATAGTAAAATTGGTAAATGATGTTGGTGCTGTGGTGAACAATGATCCTGATGTTAATAAATACCTAAAGGTATGGAACTTTTGCATTCTATCGCATCCAAAACAAACATGTCACTTCTCAACTTGGCCATCAGAGTCTTATATGTCCACCATCTATTCAAAATAATGTCATTATCATATAGTGAGTAATATTAAGATAATCTAGATTTGTAATCCTTACACAAATATTTGATTGTAATTTTGAATTAAAATGTGGACCTCCTTGTTCCTCTCAGGTGGTGTTCATTCCCAACTACAATGTATCTGTGGCCGAGGTGCTCATTCCTGGGAGTGAACTGTCACAGCACATCAGTACCGCAGGCATGGAAGCAAGTGGAACGAGTAATATGAAATTCTCTCTGAATGGTTGTGTTATCATTGGTACTCTTGATGGAGCTAATGTTGAGATAAGAGAGGAAGTGGGACAAGAAAATTTCTTCCTTTTTGGTGCCAAGGCAGATCAAGTTGCTGGGCTGAGGAAGGATAGAGAGAATGGCTTGGTAAGATATTTTCTTTCTTTCTTTCTTTTGAACGAAGCTTGGTAAGATATTTTCTAGTAGATAAGTGATATACAACCATTATTAGATTAGCTTGACTTGCAAATAGCTAAATTGAATTTGTTGGTATTGTTAGCTTATTGATCTGGTATATATTTCTCACAAGTGGATGAATTATCATTAACCTTGCTTACGTTACCAACAGTTCAAACCAGACCCACGCTTTGAAGAAGCCAAGCAGCTTATAAGGAGTGGTGCTTTTGGCACCTATGACTATGCTCCCCTCTTGGATTCTCTTGAAGGAAATTCTGGATTTGGTCGTGGTGATTATTTCCTCGTTGGCTATGATTTCCCAAGCTATATTGATGCACAGGCCCAGGTTGATGAAGCCTACAAGTAAGGATAACAAACATGCTATTTGCATTTACTTACTCCATACATTGCAAATTCTTGAACAAACATAACCATGCTCCAACAGGTCTTAATGCTATGGGAAATTTTAATGTACTCTTAGTGCTCTGAATTTGCTATAGTAATCAAAATGTGATCAGTTTGCATTCTTCTGTTGAGGGCCTACTGCTCTGGCTCAGCCTTATCCACGACCCGTAATATGGTTAGCAAATAGCAATCAATTAATATGACAACTCAACCAGTATGTAATTCTGCACAACCTATGTGAGACAACCAAACACAAGAACATTGCGCTCTTATTGCTATCTGTTCATGCACTGAATGCTTTGATTAAATCCTGTTTCTCTGACAGGGATAAGAAAAAATGGATCAAGATGTCTATACTGAACACAGCTGGAAGTGGCAAATTCAGCAGCGACCGTACTATCGCTCAGTATGCAAAGGAAATATGGGGCATTACTGCTAGCCCTGTCTCCTAA</dnaseqindica> 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| External Link(s) |
